RNA–Protein interactions for RNA: ENST00000615135.4

FAM228B-209, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 5

Gene FAM228B, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-209ENST00000615135 E2F4Q16254 413 aa10□□□□□ -0.81
FAM228B-209ENST00000615135 CRISPLD2Q9H0B8 497 aa10□□□□□ -0.81
FAM228B-209ENST00000615135 ASAP1Q9ULH1 1129 aa10□□□□□ -0.81
FAM228B-209ENST00000615135 RTL1A6NKG5 1358 aa10□□□□□ -0.81
FAM228B-209ENST00000615135 RASSF10A6NK89 507 aa9.99□□□□□ -0.81
FAM228B-209ENST00000615135 TMEM88BA6NKF7 163 aa9.99□□□□□ -0.81
FAM228B-209ENST00000615135 RPS6KA4O75676 772 aa9.99□□□□□ -0.81
FAM228B-209ENST00000615135 ITGBL1O95965 494 aaPredicted RBP9.99□□□□□ -0.81
FAM228B-209ENST00000615135 RFC4P35249 363 aa9.99□□□□□ -0.81
FAM228B-209ENST00000615135 CNTNAP4Q9C0A0 1308 aa9.99□□□□□ -0.81
FAM228B-209ENST00000615135 KDRP35968 1356 aa9.99□□□□□ -0.81
FAM228B-209ENST00000615135 TNRC18O15417 2968 aaPredicted RBP9.99□□□□□ -0.81
FAM228B-209ENST00000615135 TIAM2Q8IVF5 1701 aa9.99□□□□□ -0.81
FAM228B-209ENST00000615135 POTEJP0CG39 1038 aa9.98□□□□□ -0.81
FAM228B-209ENST00000615135 PDE4AP27815 886 aa9.98□□□□□ -0.81
FAM228B-209ENST00000615135 DDR1Q08345 913 aa9.98□□□□□ -0.81
FAM228B-209ENST00000615135 HDGFL2Q7Z4V5 671 aaPredicted RBP9.98□□□□□ -0.81
FAM228B-209ENST00000615135 USHBP1Q8N6Y0 703 aa9.98□□□□□ -0.81
FAM228B-209ENST00000615135 PDCD7Q8N8D1 485 aaKnown RBP9.98□□□□□ -0.81
FAM228B-209ENST00000615135 ATG3Q9NT62 314 aa9.98□□□□□ -0.81
FAM228B-209ENST00000615135 SMG6Q86US8 1419 aaKnown RBP9.98□□□□□ -0.81
FAM228B-209ENST00000615135 DICER1Q9UPY3 1922 aaKnown RBP9.97□□□□□ -0.81
FAM228B-209ENST00000615135 NFKBIEO00221 500 aa9.97□□□□□ -0.81
FAM228B-209ENST00000615135 TM4SF1P30408 202 aa9.97□□□□□ -0.81
FAM228B-209ENST00000615135 LDHDQ86WU2 507 aa9.97□□□□□ -0.81
FAM228B-209ENST00000615135 SLC4A9Q96Q91 983 aa9.97□□□□□ -0.81
FAM228B-209ENST00000615135 SLC12A5Q9H2X9 1139 aa9.97□□□□□ -0.81
FAM228B-209ENST00000615135 MYH14Q7Z406 1995 aaKnown RBP9.96□□□□□ -0.81
FAM228B-209ENST00000615135 FBLN1P23142 703 aa9.96□□□□□ -0.82
FAM228B-209ENST00000615135 MFSD10Q14728 455 aa9.96□□□□□ -0.82
FAM228B-209ENST00000615135 DEFB115Q30KQ5 88 aa9.96□□□□□ -0.82
FAM228B-209ENST00000615135 TERF2IPQ9NYB0 399 aa9.96□□□□□ -0.82
FAM228B-209ENST00000615135 TMOD3Q9NYL9 352 aa9.96□□□□□ -0.82
FAM228B-209ENST00000615135 WDR33Q9C0J8 1336 aaKnown RBP9.96□□□□□ -0.82
FAM228B-209ENST00000615135 A0A1W2PP64 1363 aa9.96□□□□□ -0.82
FAM228B-209ENST00000615135 COL5A3P25940 1745 aaPredicted RBP9.96□□□□□ -0.82
FAM228B-209ENST00000615135 POLRMTO00411 1230 aaKnown RBP9.95□□□□□ -0.82
FAM228B-209ENST00000615135 SEMA3EO15041 775 aa9.95□□□□□ -0.82
FAM228B-209ENST00000615135 COG3Q96JB2 828 aa9.95□□□□□ -0.82
FAM228B-209ENST00000615135 PUS7Q96PZ0 661 aaKnown RBP9.95□□□□□ -0.82
FAM228B-209ENST00000615135 DLEC1Q9Y238 1755 aa9.95□□□□□ -0.82
FAM228B-209ENST00000615135 THSD7BQ9C0I4 1608 aa9.94□□□□□ -0.82
FAM228B-209ENST00000615135 NCAPD2Q15021 1401 aa9.94□□□□□ -0.82
FAM228B-209ENST00000615135 INSRP06213 1382 aa9.94□□□□□ -0.82
FAM228B-209ENST00000615135 USP42Q9H9J4 1324 aaKnown RBP9.94□□□□□ -0.82
FAM228B-209ENST00000615135 ASTLQ6HA08 431 aaPredicted RBP9.94□□□□□ -0.82
FAM228B-209ENST00000615135 TTLL6Q8N841 843 aa9.94□□□□□ -0.82
FAM228B-209ENST00000615135 DDX27Q96GQ7 796 aaKnown RBP9.94□□□□□ -0.82
FAM228B-209ENST00000615135 L3MBTL3Q96JM7 780 aaPredicted RBP9.94□□□□□ -0.82
FAM228B-209ENST00000615135 SCN4AP35499 1836 aa9.93□□□□□ -0.82
FAM228B-209ENST00000615135 IQCA1LA6NCM1 817 aa9.93□□□□□ -0.82
FAM228B-209ENST00000615135 IRX5P78411 483 aaPredicted RBP9.93□□□□□ -0.82
FAM228B-209ENST00000615135 ERFEQ4G0M1 354 aa9.93□□□□□ -0.82
FAM228B-209ENST00000615135 PRPF38BQ5VTL8 546 aaKnown RBP9.93□□□□□ -0.82
FAM228B-209ENST00000615135 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.93□□□□□ -0.82
FAM228B-209ENST00000615135 TMC1Q8TDI8 760 aa9.93□□□□□ -0.82
FAM228B-209ENST00000615135 MCOLN1Q9GZU1 580 aa9.93□□□□□ -0.82
FAM228B-209ENST00000615135 KIF24Q5T7B8 1368 aa9.92□□□□□ -0.82
FAM228B-209ENST00000615135 LTBP3Q9NS15 1303 aa9.92□□□□□ -0.82
FAM228B-209ENST00000615135 DDNO94850 711 aaPredicted RBP9.92□□□□□ -0.82
FAM228B-209ENST00000615135 NEFLP07196 543 aa9.92□□□□□ -0.82
FAM228B-209ENST00000615135 MICALL2Q8IY33 904 aa9.92□□□□□ -0.82
FAM228B-209ENST00000615135 TAF1DQ9H5J8 278 aaPredicted RBP9.92□□□□□ -0.82
FAM228B-209ENST00000615135 SRP68Q9UHB9 627 aaKnown RBP9.92□□□□□ -0.82
FAM228B-209ENST00000615135 SPG7Q9UQ90 795 aa9.92□□□□□ -0.82
FAM228B-209ENST00000615135 NRXN2Q9P2S2 1712 aa9.92□□□□□ -0.82
FAM228B-209ENST00000615135 FER1L6Q2WGJ9 1857 aa9.91□□□□□ -0.82
FAM228B-209ENST00000615135 ADAMTSL1Q8N6G6 1762 aa9.91□□□□□ -0.82
FAM228B-209ENST00000615135 ANKRD26Q9UPS8 1709 aa9.91□□□□□ -0.82
FAM228B-209ENST00000615135 RRS1Q15050 365 aaKnown RBP9.91□□□□□ -0.82
FAM228B-209ENST00000615135 HSP90AB2PQ58FF8 381 aa9.91□□□□□ -0.82
FAM228B-209ENST00000615135 KIF20BQ96Q89 1820 aa9.91□□□□□ -0.82
FAM228B-209ENST00000615135 ADAMTS7Q9UKP4 1686 aa9.9□□□□□ -0.82
FAM228B-209ENST00000615135 PHKG2P15735 406 aa9.9□□□□□ -0.82
FAM228B-209ENST00000615135 IFNL2Q8IZJ0 200 aa9.9□□□□□ -0.82
FAM228B-209ENST00000615135 BEGAINQ9BUH8 593 aa9.9□□□□□ -0.82
FAM228B-209ENST00000615135 MRS2Q9HD23 443 aa9.9□□□□□ -0.82
FAM228B-209ENST00000615135 AFDNP55196 1824 aaKnown RBP9.9□□□□□ -0.82
FAM228B-209ENST00000615135 CASP8AP2Q9UKL3 1982 aa9.89□□□□□ -0.83
FAM228B-209ENST00000615135 ST20-MTHFSA0A0A6YYL1 179 aa9.89□□□□□ -0.83
FAM228B-209ENST00000615135 ERVV-2B6SEH9 535 aa9.89□□□□□ -0.83
FAM228B-209ENST00000615135 CA12O43570 354 aa9.89□□□□□ -0.83
FAM228B-209ENST00000615135 HNRNPUQ00839 825 aaKnown RBP eCLIP9.89□□□□□ -0.83
FAM228B-209ENST00000615135 PRKRIP1Q9H875 184 aaPredicted RBP9.89□□□□□ -0.83
FAM228B-209ENST00000615135 FLT4P35916 1363 aa9.88□□□□□ -0.83
FAM228B-209ENST00000615135 H0YIN7 160 aa9.88□□□□□ -0.83
FAM228B-209ENST00000615135 MAP2K2P36507 400 aa9.88□□□□□ -0.83
FAM228B-209ENST00000615135 ECE1P42892 770 aa9.88□□□□□ -0.83
FAM228B-209ENST00000615135 CRKLP46109 303 aaKnown RBP9.88□□□□□ -0.83
FAM228B-209ENST00000615135 CNGB1Q14028 1251 aaPredicted RBP9.88□□□□□ -0.83
FAM228B-209ENST00000615135 DSG2Q14126 1118 aa9.88□□□□□ -0.83
FAM228B-209ENST00000615135 PPP1R15BQ5SWA1 713 aa9.88□□□□□ -0.83
FAM228B-209ENST00000615135 LHX8Q68G74 356 aa9.88□□□□□ -0.83
FAM228B-209ENST00000615135 C2CD5Q86YS7 1000 aa9.88□□□□□ -0.83
FAM228B-209ENST00000615135 CNTROBQ8N137 903 aa9.88□□□□□ -0.83
FAM228B-209ENST00000615135 CAPNS2Q96L46 248 aa9.88□□□□□ -0.83
FAM228B-209ENST00000615135 GPR101Q96P66 508 aaPredicted RBP9.88□□□□□ -0.83
FAM228B-209ENST00000615135 OCEL1Q9H607 264 aa9.88□□□□□ -0.83
FAM228B-209ENST00000615135 GPHNQ9NQX3 736 aaPredicted RBP9.88□□□□□ -0.83
FAM228B-209ENST00000615135 COLQQ9Y215 455 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms