RNA–Protein interactions for RNA: ENST00000614502.4

PDLIM2-218, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-218ENST00000614502 USP16Q9Y5T5 823 aa16.08■□□□□ 0.16
PDLIM2-218ENST00000614502 SLX4Q8IY92 1834 aa16.08■□□□□ 0.16
PDLIM2-218ENST00000614502 RGL2O15211 777 aa16.07■□□□□ 0.16
PDLIM2-218ENST00000614502 CAMTA2O94983 1202 aa16.07■□□□□ 0.16
PDLIM2-218ENST00000614502 LMNB1P20700 586 aa16.07■□□□□ 0.16
PDLIM2-218ENST00000614502 ST5P78524 1137 aa16.07■□□□□ 0.16
PDLIM2-218ENST00000614502 KLRG1Q96E93 195 aa16.07■□□□□ 0.16
PDLIM2-218ENST00000614502 MAPK8IP3Q9UPT6 1336 aa16.07■□□□□ 0.16
PDLIM2-218ENST00000614502 KDM3BQ7LBC6 1761 aa16.06■□□□□ 0.16
PDLIM2-218ENST00000614502 DCTN1Q14203 1278 aa16.06■□□□□ 0.16
PDLIM2-218ENST00000614502 RALBP1Q15311 655 aa16.06■□□□□ 0.16
PDLIM2-218ENST00000614502 CNBD1Q8NA66 436 aa16.06■□□□□ 0.16
PDLIM2-218ENST00000614502 GLTPD2A6NH11 291 aa16.05■□□□□ 0.16
PDLIM2-218ENST00000614502 PRR5LQ6MZQ0 368 aa16.05■□□□□ 0.16
PDLIM2-218ENST00000614502 ZNF219Q9P2Y4 722 aaPredicted RBP16.05■□□□□ 0.16
PDLIM2-218ENST00000614502 PIP4K2AP48426 406 aaPredicted RBP16.04■□□□□ 0.16
PDLIM2-218ENST00000614502 NFE2L2Q16236 605 aa16.04■□□□□ 0.16
PDLIM2-218ENST00000614502 SMC1BQ8NDV3 1235 aa16.04■□□□□ 0.16
PDLIM2-218ENST00000614502 ZNF622Q969S3 477 aaKnown RBP eCLIP16.04■□□□□ 0.16
PDLIM2-218ENST00000614502 PLEKHF1Q96S99 279 aa16.04■□□□□ 0.16
PDLIM2-218ENST00000614502 ARFGEF2Q9Y6D5 1785 aa16.04■□□□□ 0.16
PDLIM2-218ENST00000614502 C21orf2O43822 256 aa16.03■□□□□ 0.16
PDLIM2-218ENST00000614502 JMYQ8N9B5 988 aa16.03■□□□□ 0.16
PDLIM2-218ENST00000614502 CNKSR1Q969H4 720 aa16.03■□□□□ 0.16
PDLIM2-218ENST00000614502 PRAMEF22A3QJZ6 481 aa16.02■□□□□ 0.16
PDLIM2-218ENST00000614502 POTECB2RU33 542 aa16.02■□□□□ 0.16
PDLIM2-218ENST00000614502 SOGA3Q5TF21 947 aa16.02■□□□□ 0.16
PDLIM2-218ENST00000614502 VEGFAP15692 232 aaPredicted RBP16.01■□□□□ 0.15
PDLIM2-218ENST00000614502 STYK1Q6J9G0 422 aa16.01■□□□□ 0.15
PDLIM2-218ENST00000614502 TPTE2Q6XPS3 522 aa16.01■□□□□ 0.15
PDLIM2-218ENST00000614502 NBPF5PQ86XG9 351 aaPredicted RBP16.01■□□□□ 0.15
PDLIM2-218ENST00000614502 NUP98P52948 1817 aa16.01■□□□□ 0.15
PDLIM2-218ENST00000614502 LMOD3Q0VAK6 560 aa16■□□□□ 0.15
PDLIM2-218ENST00000614502 COL13A1Q5TAT6 717 aaPredicted RBP16■□□□□ 0.15
PDLIM2-218ENST00000614502 MASTLQ96GX5 879 aa16■□□□□ 0.15
PDLIM2-218ENST00000614502 MIS18AQ9NYP9 233 aa15.99■□□□□ 0.15
PDLIM2-218ENST00000614502 NIP7Q9Y221 180 aaKnown RBP eCLIP15.99■□□□□ 0.15
PDLIM2-218ENST00000614502 NBPF26B4DH59 902 aa15.98■□□□□ 0.15
PDLIM2-218ENST00000614502 ERVV-1B6SEH8 477 aa15.98■□□□□ 0.15
PDLIM2-218ENST00000614502 SRGNP10124 158 aa15.98■□□□□ 0.15
PDLIM2-218ENST00000614502 EIF4A1P60842 406 aaKnown RBP15.98■□□□□ 0.15
PDLIM2-218ENST00000614502 ERFEQ4G0M1 354 aa15.98■□□□□ 0.15
PDLIM2-218ENST00000614502 DPY19L2Q6NUT2 758 aa15.98■□□□□ 0.15
PDLIM2-218ENST00000614502 NBPF10Q6P3W6 841 aaKnown RBP15.98■□□□□ 0.15
PDLIM2-218ENST00000614502 NBPF15Q8N660 670 aa15.98■□□□□ 0.15
PDLIM2-218ENST00000614502 BABAM1Q9NWV8 329 aa15.98■□□□□ 0.15
PDLIM2-218ENST00000614502 ERBB4Q15303 1308 aa15.97■□□□□ 0.15
PDLIM2-218ENST00000614502 MYBBP1AQ9BQG0 1328 aaKnown RBP15.97■□□□□ 0.15
PDLIM2-218ENST00000614502 LTBP3Q9NS15 1303 aa15.97■□□□□ 0.15
PDLIM2-218ENST00000614502 GTF2E1P29083 439 aaPredicted RBP15.97■□□□□ 0.15
PDLIM2-218ENST00000614502 KIF6Q6ZMV9 814 aa15.97■□□□□ 0.15
PDLIM2-218ENST00000614502 NYXQ9GZU5 481 aa15.97■□□□□ 0.15
PDLIM2-218ENST00000614502 NPR1P16066 1061 aa15.96■□□□□ 0.15
PDLIM2-218ENST00000614502 RIPK4P57078 832 aa15.96■□□□□ 0.15
PDLIM2-218ENST00000614502 PRPF40BQ6NWY9 871 aaKnown RBP15.96■□□□□ 0.15
PDLIM2-218ENST00000614502 TAOK3Q9H2K8 898 aa15.96■□□□□ 0.15
PDLIM2-218ENST00000614502 POTEIP0CG38 1075 aa15.95■□□□□ 0.14
PDLIM2-218ENST00000614502 POTEJP0CG39 1038 aa15.95■□□□□ 0.14
PDLIM2-218ENST00000614502 DDX10Q13206 875 aaKnown RBP15.95■□□□□ 0.14
PDLIM2-218ENST00000614502 TSPYL4Q9UJ04 414 aa15.95■□□□□ 0.14
PDLIM2-218ENST00000614502 MAP3K15Q6ZN16 1313 aa15.94■□□□□ 0.14
PDLIM2-218ENST00000614502 KLRG2A4D1S0 409 aaPredicted RBP15.94■□□□□ 0.14
PDLIM2-218ENST00000614502 DDNO94850 711 aaPredicted RBP15.94■□□□□ 0.14
PDLIM2-218ENST00000614502 ALDH1B1P30837 517 aa15.94■□□□□ 0.14
PDLIM2-218ENST00000614502 RRP7AQ9Y3A4 280 aaKnown RBP15.94■□□□□ 0.14
PDLIM2-218ENST00000614502 HLFQ16534 295 aa15.93■□□□□ 0.14
PDLIM2-218ENST00000614502 CCDC93Q567U6 631 aa15.93■□□□□ 0.14
PDLIM2-218ENST00000614502 OLFM4Q6UX06 510 aa15.93■□□□□ 0.14
PDLIM2-218ENST00000614502 C7orf43Q8WVR3 580 aa15.93■□□□□ 0.14
PDLIM2-218ENST00000614502 THUMPD2Q9BTF0 503 aaKnown RBP15.93■□□□□ 0.14
PDLIM2-218ENST00000614502 HSPA1AP0DMV8 641 aaKnown RBP15.92■□□□□ 0.14
PDLIM2-218ENST00000614502 HSPA1BP0DMV9 641 aaKnown RBP15.92■□□□□ 0.14
PDLIM2-218ENST00000614502 MYL6BP14649 208 aa15.92■□□□□ 0.14
PDLIM2-218ENST00000614502 TMPOP42166 694 aaKnown RBP15.92■□□□□ 0.14
PDLIM2-218ENST00000614502 WDR43Q15061 677 aaKnown RBP eCLIP15.92■□□□□ 0.14
PDLIM2-218ENST00000614502 NGEFQ8N5V2 710 aa15.92■□□□□ 0.14
PDLIM2-218ENST00000614502 SCN4AP35499 1836 aa15.91■□□□□ 0.14
PDLIM2-218ENST00000614502 IBTKQ9P2D0 1353 aaPredicted RBP15.91■□□□□ 0.14
PDLIM2-218ENST00000614502 FAM177BA6PVY3 158 aa15.91■□□□□ 0.14
PDLIM2-218ENST00000614502 RTKN2Q8IZC4 609 aa15.91■□□□□ 0.14
PDLIM2-218ENST00000614502 CAPN15O75808 1086 aa15.9■□□□□ 0.14
PDLIM2-218ENST00000614502 GIGYF2Q6Y7W6 1299 aaKnown RBP15.9■□□□□ 0.14
PDLIM2-218ENST00000614502 RUNDC1Q96C34 613 aa15.9■□□□□ 0.14
PDLIM2-218ENST00000614502 RIC1Q4ADV7 1423 aa15.9■□□□□ 0.14
PDLIM2-218ENST00000614502 PARP10Q53GL7 1025 aa15.89■□□□□ 0.13
PDLIM2-218ENST00000614502 CHADLQ6NUI6 762 aa15.89■□□□□ 0.13
PDLIM2-218ENST00000614502 PPP1R42Q7Z4L9 355 aa15.89■□□□□ 0.13
PDLIM2-218ENST00000614502 ZNF541Q9H0D2 1346 aa15.89■□□□□ 0.13
PDLIM2-218ENST00000614502 ANKRD36CQ5JPF3 1778 aa15.88■□□□□ 0.13
PDLIM2-218ENST00000614502 FKBP4Q02790 459 aaKnown RBP eCLIP15.88■□□□□ 0.13
PDLIM2-218ENST00000614502 GRIPAP1Q4V328 841 aa15.88■□□□□ 0.13
PDLIM2-218ENST00000614502 CC2D2BQ6DHV5 1058 aa15.88■□□□□ 0.13
PDLIM2-218ENST00000614502 TTLL7Q6ZT98 887 aa15.88■□□□□ 0.13
PDLIM2-218ENST00000614502 TNS4Q8IZW8 715 aa15.88■□□□□ 0.13
PDLIM2-218ENST00000614502 ZBTB3Q9H5J0 574 aa15.88■□□□□ 0.13
PDLIM2-218ENST00000614502 ZNF277Q9NRM2 450 aaPredicted RBP15.88■□□□□ 0.13
PDLIM2-218ENST00000614502 MKRN1Q9UHC7 482 aaKnown RBP15.88■□□□□ 0.13
PDLIM2-218ENST00000614502 ZNF316A6NFI3 1004 aaPredicted RBP15.87■□□□□ 0.13
PDLIM2-218ENST00000614502 EIF2S2P20042 333 aaKnown RBP15.87■□□□□ 0.13
PDLIM2-218ENST00000614502 CRY2Q49AN0 593 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms