RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 PDE1AP54750 535 aa13.57□□□□□ -0.24
ATF3-211ENST00000613954 CUL4AQ13619 759 aa13.57□□□□□ -0.24
ATF3-211ENST00000613954 TMX3Q96JJ7 454 aa13.57□□□□□ -0.24
ATF3-211ENST00000613954 MEIS3Q99687 375 aa13.57□□□□□ -0.24
ATF3-211ENST00000613954 SLC52A2Q9HAB3 445 aa13.57□□□□□ -0.24
ATF3-211ENST00000613954 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.57□□□□□ -0.24
ATF3-211ENST00000613954 RBM27Q9P2N5 1060 aaKnown RBP13.57□□□□□ -0.24
ATF3-211ENST00000613954 CACNA1FO60840 1977 aa13.56□□□□□ -0.24
ATF3-211ENST00000613954 COL14A1Q05707 1796 aaKnown RBP13.56□□□□□ -0.24
ATF3-211ENST00000613954 MRC1P22897 1456 aa13.56□□□□□ -0.24
ATF3-211ENST00000613954 EPB41L2O43491 1005 aaKnown RBP13.56□□□□□ -0.24
ATF3-211ENST00000613954 LARP1Q6PKG0 1096 aaKnown RBP13.56□□□□□ -0.24
ATF3-211ENST00000613954 STRN4Q9NRL3 753 aa13.56□□□□□ -0.24
ATF3-211ENST00000613954 FLIIQ13045 1269 aa13.56□□□□□ -0.24
ATF3-211ENST00000613954 NECTIN2Q92692 538 aa13.56□□□□□ -0.24
ATF3-211ENST00000613954 PHLPP1O60346 1717 aa13.55□□□□□ -0.24
ATF3-211ENST00000613954 HEG1Q9ULI3 1381 aa13.55□□□□□ -0.24
ATF3-211ENST00000613954 APBB1O00213 710 aa13.55□□□□□ -0.24
ATF3-211ENST00000613954 DYNC1I1O14576 645 aa13.55□□□□□ -0.24
ATF3-211ENST00000613954 TOM1O60784 492 aa13.55□□□□□ -0.24
ATF3-211ENST00000613954 IL2RBP14784 551 aa13.55□□□□□ -0.24
ATF3-211ENST00000613954 ADRA2BP18089 450 aa13.55□□□□□ -0.24
ATF3-211ENST00000613954 ZCRB1Q8TBF4 217 aaKnown RBP13.55□□□□□ -0.24
ATF3-211ENST00000613954 IL17RAQ96F46 866 aa13.55□□□□□ -0.24
ATF3-211ENST00000613954 PODXL2Q9NZ53 605 aa13.55□□□□□ -0.24
ATF3-211ENST00000613954 PCDH11XQ9BZA7 1347 aa13.55□□□□□ -0.24
ATF3-211ENST00000613954 PCDH11YQ9BZA8 1340 aa13.55□□□□□ -0.24
ATF3-211ENST00000613954 TSPY26PQ9H489 355 aa13.54□□□□□ -0.24
ATF3-211ENST00000613954 COL16A1Q07092 1604 aaPredicted RBP13.54□□□□□ -0.24
ATF3-211ENST00000613954 TUBGCP6Q96RT7 1819 aa13.54□□□□□ -0.24
ATF3-211ENST00000613954 UQCRHLA0A096LP55 91 aa13.54□□□□□ -0.24
ATF3-211ENST00000613954 UQCRHP07919 91 aa13.54□□□□□ -0.24
ATF3-211ENST00000613954 SASS6Q6UVJ0 657 aa13.54□□□□□ -0.24
ATF3-211ENST00000613954 FAM184AQ8NB25 1140 aa13.54□□□□□ -0.24
ATF3-211ENST00000613954 ESYT1Q9BSJ8 1104 aa13.54□□□□□ -0.24
ATF3-211ENST00000613954 BTG4Q9NY30 223 aa13.54□□□□□ -0.24
ATF3-211ENST00000613954 GIGYF1O75420 1035 aaPredicted RBP13.53□□□□□ -0.24
ATF3-211ENST00000613954 GNAI2P04899 355 aa13.53□□□□□ -0.24
ATF3-211ENST00000613954 EIF2S2P20042 333 aaKnown RBP13.53□□□□□ -0.24
ATF3-211ENST00000613954 FKBP5Q13451 457 aaPredicted RBP13.53□□□□□ -0.24
ATF3-211ENST00000613954 KLHL34Q8N239 644 aa13.53□□□□□ -0.24
ATF3-211ENST00000613954 SRCIN1Q9C0H9 1055 aa13.53□□□□□ -0.24
ATF3-211ENST00000613954 UVSSAQ2YD98 709 aa13.52□□□□□ -0.24
ATF3-211ENST00000613954 NFATC2IPQ8NCF5 419 aa13.52□□□□□ -0.24
ATF3-211ENST00000613954 PXDNLA1KZ92 1463 aa13.52□□□□□ -0.25
ATF3-211ENST00000613954 F6X3S4 739 aa13.52□□□□□ -0.25
ATF3-211ENST00000613954 ZNF790Q6PG37 636 aa13.52□□□□□ -0.25
ATF3-211ENST00000613954 SLC4A10Q6U841 1118 aa13.52□□□□□ -0.25
ATF3-211ENST00000613954 LRRCC1Q9C099 1032 aa13.52□□□□□ -0.25
ATF3-211ENST00000613954 SALL3Q9BXA9 1300 aa13.52□□□□□ -0.25
ATF3-211ENST00000613954 MX1P20591 662 aa13.51□□□□□ -0.25
ATF3-211ENST00000613954 KIAA2012Q0VF49 1180 aa13.51□□□□□ -0.25
ATF3-211ENST00000613954 CHPF2Q9P2E5 772 aa13.51□□□□□ -0.25
ATF3-211ENST00000613954 NSFL1CQ9UNZ2 370 aaKnown RBP13.51□□□□□ -0.25
ATF3-211ENST00000613954 WDR33Q9C0J8 1336 aaKnown RBP13.51□□□□□ -0.25
ATF3-211ENST00000613954 PTMAP06454 111 aaKnown RBP13.51□□□□□ -0.25
ATF3-211ENST00000613954 GNAI3P08754 354 aa13.51□□□□□ -0.25
ATF3-211ENST00000613954 CABP4P57796 275 aa13.51□□□□□ -0.25
ATF3-211ENST00000613954 NKX1-1Q15270 411 aaPredicted RBP13.51□□□□□ -0.25
ATF3-211ENST00000613954 FAM13BQ9NYF5 915 aa13.51□□□□□ -0.25
ATF3-211ENST00000613954 AOX1Q06278 1338 aa13.5□□□□□ -0.25
ATF3-211ENST00000613954 N4BP2Q86UW6 1770 aaPredicted RBP13.5□□□□□ -0.25
ATF3-211ENST00000613954 LETM1O95202 739 aaPredicted RBP13.5□□□□□ -0.25
ATF3-211ENST00000613954 PIP4K2BP78356 416 aa13.5□□□□□ -0.25
ATF3-211ENST00000613954 DBF4Q9UBU7 674 aaPredicted RBP13.5□□□□□ -0.25
ATF3-211ENST00000613954 SHANK3Q9BYB0 1731 aa13.5□□□□□ -0.25
ATF3-211ENST00000613954 CHMLP26374 656 aa13.49□□□□□ -0.25
ATF3-211ENST00000613954 SLC39A6Q13433 755 aa13.49□□□□□ -0.25
ATF3-211ENST00000613954 PHAXQ9H814 394 aaKnown RBP13.49□□□□□ -0.25
ATF3-211ENST00000613954 STAP2Q9UGK3 403 aa13.49□□□□□ -0.25
ATF3-211ENST00000613954 ERVV-2B6SEH9 535 aa13.49□□□□□ -0.25
ATF3-211ENST00000613954 RBM10P98175 930 aaKnown RBP13.49□□□□□ -0.25
ATF3-211ENST00000613954 TTC5Q8N0Z6 440 aa13.49□□□□□ -0.25
ATF3-211ENST00000613954 ANO2Q9NQ90 1003 aa13.49□□□□□ -0.25
ATF3-211ENST00000613954 FOXD4L5Q5VV16 416 aaPredicted RBP13.48□□□□□ -0.25
ATF3-211ENST00000613954 TMEM87AQ8NBN3 555 aa13.48□□□□□ -0.25
ATF3-211ENST00000613954 RNF214Q8ND24 703 aa13.48□□□□□ -0.25
ATF3-211ENST00000613954 FOXD4L4Q8WXT5 416 aaPredicted RBP13.48□□□□□ -0.25
ATF3-211ENST00000613954 ATP8B2P98198 1209 aa13.47□□□□□ -0.25
ATF3-211ENST00000613954 DDX54Q8TDD1 881 aaKnown RBP13.47□□□□□ -0.25
ATF3-211ENST00000613954 EXOC6BQ9Y2D4 811 aa13.47□□□□□ -0.25
ATF3-211ENST00000613954 DISP2A7MBM2 1401 aa13.47□□□□□ -0.25
ATF3-211ENST00000613954 PRAMEF22A3QJZ6 481 aa13.47□□□□□ -0.25
ATF3-211ENST00000613954 TRIM6-TRIM34B2RNG4 842 aa13.47□□□□□ -0.25
ATF3-211ENST00000613954 UBAP1LF5GYI3 381 aa13.47□□□□□ -0.25
ATF3-211ENST00000613954 ZNF496Q96IT1 587 aaPredicted RBP13.47□□□□□ -0.25
ATF3-211ENST00000613954 FMNL2Q96PY5 1086 aa13.47□□□□□ -0.25
ATF3-211ENST00000613954 HYPKQ9NX55 129 aa13.47□□□□□ -0.25
ATF3-211ENST00000613954 PLCH1Q4KWH8 1693 aa13.47□□□□□ -0.25
ATF3-211ENST00000613954 C5P01031 1676 aa13.46□□□□□ -0.25
ATF3-211ENST00000613954 HMGN5P82970 282 aaKnown RBP13.46□□□□□ -0.25
ATF3-211ENST00000613954 RILPL2Q969X0 211 aa13.46□□□□□ -0.25
ATF3-211ENST00000613954 PRIMPOLQ96LW4 560 aa13.46□□□□□ -0.25
ATF3-211ENST00000613954 PALD1Q9ULE6 856 aa13.46□□□□□ -0.25
ATF3-211ENST00000613954 ANXA1P04083 346 aa13.46□□□□□ -0.26
ATF3-211ENST00000613954 SNRPA1P09661 255 aaKnown RBP13.46□□□□□ -0.26
ATF3-211ENST00000613954 CCDC183Q5T5S1 534 aa13.46□□□□□ -0.26
ATF3-211ENST00000613954 DNAAF4Q8WXU2 420 aa13.46□□□□□ -0.26
ATF3-211ENST00000613954 CHAMP1Q96JM3 812 aa13.46□□□□□ -0.26
ATF3-211ENST00000613954 DDX21Q9NR30 783 aaKnown RBP eCLIP13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms