RNA–Protein interactions for RNA: ENST00000613870.4

PSMB3-208, Transcript of proteasome subunit beta 3, humanhuman

TSL 3

Gene PSMB3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-208ENST00000613870 ZNF496Q96IT1 587 aaPredicted RBP10.68□□□□□ -0.7
PSMB3-208ENST00000613870 GIGYF1O75420 1035 aaPredicted RBP10.67□□□□□ -0.7
PSMB3-208ENST00000613870 MMP10P09238 476 aa10.67□□□□□ -0.7
PSMB3-208ENST00000613870 C20orf194Q5TEA3 1177 aa10.67□□□□□ -0.7
PSMB3-208ENST00000613870 DZIP1LQ8IYY4 767 aaKnown RBP10.67□□□□□ -0.7
PSMB3-208ENST00000613870 PANK1Q8TE04 598 aa10.67□□□□□ -0.7
PSMB3-208ENST00000613870 CRBNQ96SW2 442 aa10.67□□□□□ -0.7
PSMB3-208ENST00000613870 SRP68Q9UHB9 627 aaKnown RBP10.67□□□□□ -0.7
PSMB3-208ENST00000613870 KIF13BQ9NQT8 1826 aa10.66□□□□□ -0.7
PSMB3-208ENST00000613870 PRAMEF22A3QJZ6 481 aa10.66□□□□□ -0.7
PSMB3-208ENST00000613870 ATF7IPQ6VMQ6 1270 aa10.66□□□□□ -0.7
PSMB3-208ENST00000613870 VSIG10Q8N0Z9 540 aa10.66□□□□□ -0.7
PSMB3-208ENST00000613870 EXOC6Q8TAG9 804 aa10.66□□□□□ -0.7
PSMB3-208ENST00000613870 API5Q9BZZ5 524 aaKnown RBP10.66□□□□□ -0.7
PSMB3-208ENST00000613870 CCDC87Q9NVE4 849 aa10.66□□□□□ -0.7
PSMB3-208ENST00000613870 CHPF2Q9P2E5 772 aa10.66□□□□□ -0.7
PSMB3-208ENST00000613870 KDM3BQ7LBC6 1761 aa10.66□□□□□ -0.7
PSMB3-208ENST00000613870 USP42Q9H9J4 1324 aaKnown RBP10.65□□□□□ -0.7
PSMB3-208ENST00000613870 KIAA1551Q9HCM1 1747 aa10.65□□□□□ -0.7
PSMB3-208ENST00000613870 MYL6BP14649 208 aa10.65□□□□□ -0.7
PSMB3-208ENST00000613870 FKBP5Q13451 457 aaPredicted RBP10.65□□□□□ -0.7
PSMB3-208ENST00000613870 PDE3AQ14432 1141 aa10.65□□□□□ -0.7
PSMB3-208ENST00000613870 ITPRIPQ8IWB1 547 aa10.65□□□□□ -0.7
PSMB3-208ENST00000613870 DBF4Q9UBU7 674 aaPredicted RBP10.65□□□□□ -0.7
PSMB3-208ENST00000613870 ZBTB1Q9Y2K1 713 aa10.65□□□□□ -0.7
PSMB3-208ENST00000613870 COG6Q9Y2V7 657 aa10.65□□□□□ -0.7
PSMB3-208ENST00000613870 HEG1Q9ULI3 1381 aa10.65□□□□□ -0.71
PSMB3-208ENST00000613870 GRIN3BO60391 1043 aa10.64□□□□□ -0.71
PSMB3-208ENST00000613870 STARD3NLO95772 234 aa10.64□□□□□ -0.71
PSMB3-208ENST00000613870 ANXA1P04083 346 aa10.64□□□□□ -0.71
PSMB3-208ENST00000613870 TRIM27P14373 513 aa10.64□□□□□ -0.71
PSMB3-208ENST00000613870 ERICH6BQ5W0A0 696 aa10.64□□□□□ -0.71
PSMB3-208ENST00000613870 SLC4A10Q6U841 1118 aa10.64□□□□□ -0.71
PSMB3-208ENST00000613870 ZNF784Q8NCA9 323 aaPredicted RBP10.64□□□□□ -0.71
PSMB3-208ENST00000613870 TNNQ9UQP3 1299 aa10.64□□□□□ -0.71
PSMB3-208ENST00000613870 N4BP2Q86UW6 1770 aaPredicted RBP10.64□□□□□ -0.71
PSMB3-208ENST00000613870 PTPRCP08575 1304 aa10.63□□□□□ -0.71
PSMB3-208ENST00000613870 BRPF1P55201 1214 aaPredicted RBP10.63□□□□□ -0.71
PSMB3-208ENST00000613870 AIMP1Q12904 312 aaKnown RBP10.63□□□□□ -0.71
PSMB3-208ENST00000613870 FLIIQ13045 1269 aa10.63□□□□□ -0.71
PSMB3-208ENST00000613870 USPL1Q5W0Q7 1092 aa10.63□□□□□ -0.71
PSMB3-208ENST00000613870 G2E3Q7L622 706 aa10.63□□□□□ -0.71
PSMB3-208ENST00000613870 NPM2Q86SE8 214 aaKnown RBP10.63□□□□□ -0.71
PSMB3-208ENST00000613870 ARHGAP45Q92619 1136 aa10.63□□□□□ -0.71
PSMB3-208ENST00000613870 TEX13AQ9BXU3 409 aaPredicted RBP10.63□□□□□ -0.71
PSMB3-208ENST00000613870 HYPKQ9NX55 129 aa10.63□□□□□ -0.71
PSMB3-208ENST00000613870 WWC3Q9ULE0 1092 aa10.63□□□□□ -0.71
PSMB3-208ENST00000613870 ZNF330Q9Y3S2 320 aaPredicted RBP10.63□□□□□ -0.71
PSMB3-208ENST00000613870 USP16Q9Y5T5 823 aa10.63□□□□□ -0.71
PSMB3-208ENST00000613870 PARP3Q9Y6F1 533 aa10.63□□□□□ -0.71
PSMB3-208ENST00000613870 C10orf71Q711Q0 1435 aa10.62□□□□□ -0.71
PSMB3-208ENST00000613870 DDX58O95786 925 aaKnown RBP10.62□□□□□ -0.71
PSMB3-208ENST00000613870 TM4SF1P30408 202 aa10.62□□□□□ -0.71
PSMB3-208ENST00000613870 PIP4K2AP48426 406 aaPredicted RBP10.62□□□□□ -0.71
PSMB3-208ENST00000613870 TGFB2P61812 414 aa10.62□□□□□ -0.71
PSMB3-208ENST00000613870 DDR1Q08345 913 aa10.62□□□□□ -0.71
PSMB3-208ENST00000613870 TMEM57Q8N5G2 664 aa10.62□□□□□ -0.71
PSMB3-208ENST00000613870 PHAXQ9H814 394 aaKnown RBP10.62□□□□□ -0.71
PSMB3-208ENST00000613870 BCL2L12Q9HB09 334 aa10.62□□□□□ -0.71
PSMB3-208ENST00000613870 DDX21Q9NR30 783 aaKnown RBP eCLIP10.62□□□□□ -0.71
PSMB3-208ENST00000613870 PPP4R2Q9NY27 417 aa10.62□□□□□ -0.71
PSMB3-208ENST00000613870 NARFQ9UHQ1 456 aa10.62□□□□□ -0.71
PSMB3-208ENST00000613870 COL15A1P39059 1388 aa10.62□□□□□ -0.71
PSMB3-208ENST00000613870 PXDNLA1KZ92 1463 aa10.61□□□□□ -0.71
PSMB3-208ENST00000613870 AFDNP55196 1824 aaKnown RBP10.61□□□□□ -0.71
PSMB3-208ENST00000613870 A0A0G2JLW4 131 aa10.61□□□□□ -0.71
PSMB3-208ENST00000613870 ZPR1O75312 459 aa10.61□□□□□ -0.71
PSMB3-208ENST00000613870 A1BGP04217 495 aa10.61□□□□□ -0.71
PSMB3-208ENST00000613870 RLBP1P12271 317 aa10.61□□□□□ -0.71
PSMB3-208ENST00000613870 EIF5P55010 431 aaKnown RBP10.61□□□□□ -0.71
PSMB3-208ENST00000613870 CCDC136Q96JN2 1154 aa10.61□□□□□ -0.71
PSMB3-208ENST00000613870 BRCA1P38398 1863 aaKnown RBP10.6□□□□□ -0.71
PSMB3-208ENST00000613870 F6X3S4 739 aa10.6□□□□□ -0.71
PSMB3-208ENST00000613870 POLRMTO00411 1230 aaKnown RBP10.6□□□□□ -0.71
PSMB3-208ENST00000613870 KCNA3P22001 575 aa10.6□□□□□ -0.71
PSMB3-208ENST00000613870 MVPQ14764 893 aaKnown RBP10.6□□□□□ -0.71
PSMB3-208ENST00000613870 PROSER3Q2NL68 480 aa10.6□□□□□ -0.71
PSMB3-208ENST00000613870 RIC3Q7Z5B4 369 aa10.6□□□□□ -0.71
PSMB3-208ENST00000613870 XAGE3Q8WTP9 111 aa10.6□□□□□ -0.71
PSMB3-208ENST00000613870 CHMP4BQ9H444 224 aaKnown RBP10.6□□□□□ -0.71
PSMB3-208ENST00000613870 DPEP1P16444 411 aa10.59□□□□□ -0.71
PSMB3-208ENST00000613870 CCT4P50991 539 aaKnown RBP10.59□□□□□ -0.71
PSMB3-208ENST00000613870 NFIXQ14938 502 aa10.59□□□□□ -0.71
PSMB3-208ENST00000613870 DDX19BQ9UMR2 479 aa10.59□□□□□ -0.71
PSMB3-208ENST00000613870 ERBB4Q15303 1308 aa10.58□□□□□ -0.71
PSMB3-208ENST00000613870 NRXN2Q9P2S2 1712 aa10.58□□□□□ -0.72
PSMB3-208ENST00000613870 PI4KAP2A4QPH2 592 aa10.58□□□□□ -0.72
PSMB3-208ENST00000613870 IL6STP40189 918 aaPredicted RBP10.58□□□□□ -0.72
PSMB3-208ENST00000613870 B4GALNT3Q6L9W6 998 aa10.58□□□□□ -0.72
PSMB3-208ENST00000613870 COPS6Q7L5N1 327 aa10.58□□□□□ -0.72
PSMB3-208ENST00000613870 PI4KAP1Q8N8J0 262 aa10.58□□□□□ -0.72
PSMB3-208ENST00000613870 ABCC4O15439 1325 aa10.58□□□□□ -0.72
PSMB3-208ENST00000613870 A0A087WZG4 1122 aa10.57□□□□□ -0.72
PSMB3-208ENST00000613870 NEXNQ0ZGT2 675 aa10.57□□□□□ -0.72
PSMB3-208ENST00000613870 PDIA6Q15084 440 aa10.57□□□□□ -0.72
PSMB3-208ENST00000613870 KIF6Q6ZMV9 814 aa10.57□□□□□ -0.72
PSMB3-208ENST00000613870 DNAAF4Q8WXU2 420 aa10.57□□□□□ -0.72
PSMB3-208ENST00000613870 TBC1D2BQ9UPU7 963 aa10.57□□□□□ -0.72
PSMB3-208ENST00000613870 BCS1LQ9Y276 419 aa10.57□□□□□ -0.72
PSMB3-208ENST00000613870 MAP3K2Q9Y2U5 619 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms