RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 ATF7IPQ6VMQ6 1270 aa18.7■□□□□ 0.58
CD48-203ENST00000613788 ANO8Q9HCE9 1232 aaPredicted RBP18.7■□□□□ 0.58
CD48-203ENST00000613788 MAP3K15Q6ZN16 1313 aa18.7■□□□□ 0.58
CD48-203ENST00000613788 PI4KAP2A4QPH2 592 aa18.69■□□□□ 0.58
CD48-203ENST00000613788 ERVV-1B6SEH8 477 aa18.69■□□□□ 0.58
CD48-203ENST00000613788 ZPR1O75312 459 aa18.69■□□□□ 0.58
CD48-203ENST00000613788 PI4KAP1Q8N8J0 262 aa18.69■□□□□ 0.58
CD48-203ENST00000613788 NUP188Q5SRE5 1749 aa18.69■□□□□ 0.58
CD48-203ENST00000613788 RRP1P56182 461 aaKnown RBP18.69■□□□□ 0.58
CD48-203ENST00000613788 SMIM5Q71RC9 77 aa18.69■□□□□ 0.58
CD48-203ENST00000613788 AMIGO3Q86WK7 504 aa18.69■□□□□ 0.58
CD48-203ENST00000613788 ZBTB3Q9H5J0 574 aa18.69■□□□□ 0.58
CD48-203ENST00000613788 NARFQ9UHQ1 456 aa18.69■□□□□ 0.58
CD48-203ENST00000613788 RGL2O15211 777 aa18.68■□□□□ 0.58
CD48-203ENST00000613788 TRIM27P14373 513 aa18.68■□□□□ 0.58
CD48-203ENST00000613788 MAP3K2Q9Y2U5 619 aa18.68■□□□□ 0.58
CD48-203ENST00000613788 PLIN1O60240 522 aa18.67■□□□□ 0.58
CD48-203ENST00000613788 DNAAF4Q8WXU2 420 aa18.67■□□□□ 0.58
CD48-203ENST00000613788 ZNF652Q9Y2D9 606 aa18.67■□□□□ 0.58
CD48-203ENST00000613788 RNF123Q5XPI4 1314 aa18.66■□□□□ 0.58
CD48-203ENST00000613788 F6X3S4 739 aa18.66■□□□□ 0.58
CD48-203ENST00000613788 MSH5O43196 834 aa18.66■□□□□ 0.58
CD48-203ENST00000613788 CAMTA2O94983 1202 aa18.66■□□□□ 0.58
CD48-203ENST00000613788 CLEC4GQ6UXB4 293 aa18.66■□□□□ 0.58
CD48-203ENST00000613788 GIGYF2Q6Y7W6 1299 aaKnown RBP18.66■□□□□ 0.58
CD48-203ENST00000613788 COL23A1Q86Y22 540 aaPredicted RBP18.66■□□□□ 0.58
CD48-203ENST00000613788 FTSJ3Q8IY81 847 aaKnown RBP18.66■□□□□ 0.58
CD48-203ENST00000613788 ADCY9O60503 1353 aa18.66■□□□□ 0.58
CD48-203ENST00000613788 PNPLA7Q6ZV29 1317 aa18.66■□□□□ 0.58
CD48-203ENST00000613788 UBR3Q6ZT12 1888 aa18.65■□□□□ 0.58
CD48-203ENST00000613788 NEXNQ0ZGT2 675 aa18.65■□□□□ 0.58
CD48-203ENST00000613788 PDE3AQ14432 1141 aa18.65■□□□□ 0.58
CD48-203ENST00000613788 HSP90AB3PQ58FF7 597 aa18.65■□□□□ 0.58
CD48-203ENST00000613788 DZIP1LQ8IYY4 767 aaKnown RBP18.65■□□□□ 0.58
CD48-203ENST00000613788 METTL22Q9BUU2 404 aaPredicted RBP18.65■□□□□ 0.58
CD48-203ENST00000613788 USP42Q9H9J4 1324 aaKnown RBP18.65■□□□□ 0.58
CD48-203ENST00000613788 USPL1Q5W0Q7 1092 aa18.64■□□□□ 0.58
CD48-203ENST00000613788 SLC4A10Q6U841 1118 aa18.64■□□□□ 0.58
CD48-203ENST00000613788 CLUAP1Q96AJ1 413 aa18.64■□□□□ 0.58
CD48-203ENST00000613788 SOCS7O14512 581 aa18.64■□□□□ 0.57
CD48-203ENST00000613788 TCIRG1Q13488 830 aa18.64■□□□□ 0.57
CD48-203ENST00000613788 HLFQ16534 295 aa18.64■□□□□ 0.57
CD48-203ENST00000613788 SRP68Q9UHB9 627 aaKnown RBP18.64■□□□□ 0.57
CD48-203ENST00000613788 CCT4P50991 539 aaKnown RBP18.63■□□□□ 0.57
CD48-203ENST00000613788 ABCC4O15439 1325 aa18.62■□□□□ 0.57
CD48-203ENST00000613788 MYD88Q99836 296 aa18.62■□□□□ 0.57
CD48-203ENST00000613788 LINS1Q8NG48 757 aa18.61■□□□□ 0.57
CD48-203ENST00000613788 SRCIN1Q9C0H9 1055 aa18.61■□□□□ 0.57
CD48-203ENST00000613788 BCL2L12Q9HB09 334 aa18.61■□□□□ 0.57
CD48-203ENST00000613788 TNNQ9UQP3 1299 aa18.61■□□□□ 0.57
CD48-203ENST00000613788 GYS1P13807 737 aa18.6■□□□□ 0.57
CD48-203ENST00000613788 BEND3Q5T5X7 828 aa18.6■□□□□ 0.57
CD48-203ENST00000613788 INTS3Q68E01 1043 aaKnown RBP18.6■□□□□ 0.57
CD48-203ENST00000613788 NLGN1Q8N2Q7 840 aa18.6■□□□□ 0.57
CD48-203ENST00000613788 SLC16A10Q8TF71 515 aa18.6■□□□□ 0.57
CD48-203ENST00000613788 TRIM28Q13263 835 aaKnown RBP18.59■□□□□ 0.57
CD48-203ENST00000613788 R3HDM1Q15032 1099 aaKnown RBP18.59■□□□□ 0.57
CD48-203ENST00000613788 PANK1Q8TE04 598 aa18.59■□□□□ 0.57
CD48-203ENST00000613788 ATP10DQ9P241 1426 aa18.59■□□□□ 0.57
CD48-203ENST00000613788 PXDNLA1KZ92 1463 aa18.59■□□□□ 0.57
CD48-203ENST00000613788 ATP5J2-PTCD1G3V325 749 aa18.59■□□□□ 0.57
CD48-203ENST00000613788 ALDH1L1O75891 902 aa18.59■□□□□ 0.57
CD48-203ENST00000613788 RLBP1P12271 317 aa18.59■□□□□ 0.57
CD48-203ENST00000613788 ZNF34Q8IZ26 560 aa18.59■□□□□ 0.57
CD48-203ENST00000613788 TMEM57Q8N5G2 664 aa18.59■□□□□ 0.57
CD48-203ENST00000613788 CCDC191Q8NCU4 936 aa18.59■□□□□ 0.57
CD48-203ENST00000613788 ISCA1Q9BUE6 129 aa18.59■□□□□ 0.57
CD48-203ENST00000613788 NIP7Q9Y221 180 aaKnown RBP eCLIP18.59■□□□□ 0.57
CD48-203ENST00000613788 QSER1Q2KHR3 1735 aa18.58■□□□□ 0.57
CD48-203ENST00000613788 IGKV5-2P06315 115 aa18.58■□□□□ 0.56
CD48-203ENST00000613788 FKBP8Q14318 412 aa18.58■□□□□ 0.56
CD48-203ENST00000613788 PARP10Q53GL7 1025 aa18.58■□□□□ 0.56
CD48-203ENST00000613788 C20orf194Q5TEA3 1177 aa18.58■□□□□ 0.56
CD48-203ENST00000613788 SETDB2Q96T68 719 aa18.58■□□□□ 0.56
CD48-203ENST00000613788 C4AP0C0L4 1744 aa18.57■□□□□ 0.56
CD48-203ENST00000613788 NEURL1BA8MQ27 555 aa18.57■□□□□ 0.56
CD48-203ENST00000613788 GPTP24298 496 aa18.57■□□□□ 0.56
CD48-203ENST00000613788 CWF19L2Q2TBE0 894 aaKnown RBP18.57■□□□□ 0.56
CD48-203ENST00000613788 TBC1D9BQ66K14 1250 aa18.57■□□□□ 0.56
CD48-203ENST00000613788 ITPRIPQ8IWB1 547 aa18.57■□□□□ 0.56
CD48-203ENST00000613788 CWC25Q9NXE8 425 aaPredicted RBP18.57■□□□□ 0.56
CD48-203ENST00000613788 TUBGCP6Q96RT7 1819 aa18.57■□□□□ 0.56
CD48-203ENST00000613788 ARFGEF2Q9Y6D5 1785 aa18.56■□□□□ 0.56
CD48-203ENST00000613788 BICDL1Q6ZP65 573 aa18.56■□□□□ 0.56
CD48-203ENST00000613788 GCKRQ14397 625 aa18.55■□□□□ 0.56
CD48-203ENST00000613788 MVPQ14764 893 aaKnown RBP18.55■□□□□ 0.56
CD48-203ENST00000613788 PPP1R42Q7Z4L9 355 aa18.55■□□□□ 0.56
CD48-203ENST00000613788 NLRP10Q86W26 655 aa18.55■□□□□ 0.56
CD48-203ENST00000613788 CHMP4BQ9H444 224 aaKnown RBP18.55■□□□□ 0.56
CD48-203ENST00000613788 COG6Q9Y2V7 657 aa18.55■□□□□ 0.56
CD48-203ENST00000613788 SCN7AQ01118 1682 aa18.55■□□□□ 0.56
CD48-203ENST00000613788 BCORQ6W2J9 1755 aa18.55■□□□□ 0.56
CD48-203ENST00000613788 IBTKQ9P2D0 1353 aaPredicted RBP18.54■□□□□ 0.56
CD48-203ENST00000613788 TM4SF1P30408 202 aa18.54■□□□□ 0.56
CD48-203ENST00000613788 NFIXQ14938 502 aa18.54■□□□□ 0.56
CD48-203ENST00000613788 PDGFDQ9GZP0 370 aaPredicted RBP18.54■□□□□ 0.56
CD48-203ENST00000613788 C9orf78Q9NZ63 289 aaPredicted RBP18.54■□□□□ 0.56
CD48-203ENST00000613788 DDX19BQ9UMR2 479 aa18.54■□□□□ 0.56
CD48-203ENST00000613788 NUP98P52948 1817 aa18.54■□□□□ 0.56
CD48-203ENST00000613788 PSDA5PKW4 1024 aaPredicted RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms