RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 SAMM50Q9Y512 469 aa12.45□□□□□ -0.42
CNTNAP3B-211ENST00000612828 RNF8O76064 485 aa12.45□□□□□ -0.42
CNTNAP3B-211ENST00000612828 GJC1P36383 396 aa12.45□□□□□ -0.42
CNTNAP3B-211ENST00000612828 EVC2Q86UK5 1308 aa12.45□□□□□ -0.42
CNTNAP3B-211ENST00000612828 EIF5P55010 431 aaKnown RBP12.45□□□□□ -0.42
CNTNAP3B-211ENST00000612828 SKOR2Q2VWA4 1001 aaPredicted RBP12.45□□□□□ -0.42
CNTNAP3B-211ENST00000612828 FAM43AQ8N2R8 423 aa12.45□□□□□ -0.42
CNTNAP3B-211ENST00000612828 NCAPGQ9BPX3 1015 aa12.45□□□□□ -0.42
CNTNAP3B-211ENST00000612828 EID1Q9Y6B2 187 aa12.45□□□□□ -0.42
CNTNAP3B-211ENST00000612828 FAM13AO94988 1023 aa12.45□□□□□ -0.42
CNTNAP3B-211ENST00000612828 DDX11Q96FC9 970 aa12.45□□□□□ -0.42
CNTNAP3B-211ENST00000612828 FYCO1Q9BQS8 1478 aa12.45□□□□□ -0.42
CNTNAP3B-211ENST00000612828 UTP14AQ9BVJ6 771 aaKnown RBP12.44□□□□□ -0.42
CNTNAP3B-211ENST00000612828 CNNM1Q9NRU3 951 aa12.44□□□□□ -0.42
CNTNAP3B-211ENST00000612828 NUCB1Q02818 461 aa12.44□□□□□ -0.42
CNTNAP3B-211ENST00000612828 NBPF6Q5VWK0 638 aa12.44□□□□□ -0.42
CNTNAP3B-211ENST00000612828 CKAP2LQ8IYA6 745 aa12.44□□□□□ -0.42
CNTNAP3B-211ENST00000612828 NBPF4Q96M43 638 aa12.44□□□□□ -0.42
CNTNAP3B-211ENST00000612828 A0A1B0GUL7 405 aa12.44□□□□□ -0.42
CNTNAP3B-211ENST00000612828 MGEA5O60502 916 aa12.44□□□□□ -0.42
CNTNAP3B-211ENST00000612828 OCM2P0CE71 109 aa12.44□□□□□ -0.42
CNTNAP3B-211ENST00000612828 OCMP0CE72 109 aaPredicted RBP12.44□□□□□ -0.42
CNTNAP3B-211ENST00000612828 ZNF853P0CG23 659 aa12.44□□□□□ -0.42
CNTNAP3B-211ENST00000612828 IRX3P78415 501 aaPredicted RBP12.44□□□□□ -0.42
CNTNAP3B-211ENST00000612828 STK3Q13188 491 aa12.44□□□□□ -0.42
CNTNAP3B-211ENST00000612828 CCDC158Q5M9N0 1113 aa12.44□□□□□ -0.42
CNTNAP3B-211ENST00000612828 BICD1Q96G01 975 aa12.44□□□□□ -0.42
CNTNAP3B-211ENST00000612828 GSDMBQ8TAX9 411 aa12.44□□□□□ -0.42
CNTNAP3B-211ENST00000612828 SLC4A8Q2Y0W8 1093 aa12.44□□□□□ -0.42
CNTNAP3B-211ENST00000612828 ADRA2BP18089 450 aa12.44□□□□□ -0.42
CNTNAP3B-211ENST00000612828 HNRNPCL2B2RXH8 293 aa12.43□□□□□ -0.42
CNTNAP3B-211ENST00000612828 HNRNPCL1O60812 293 aaKnown RBP12.43□□□□□ -0.42
CNTNAP3B-211ENST00000612828 RNF168Q8IYW5 571 aaPredicted RBP12.43□□□□□ -0.42
CNTNAP3B-211ENST00000612828 BMP2KQ9NSY1 1161 aaPredicted RBP12.43□□□□□ -0.42
CNTNAP3B-211ENST00000612828 RABGAP1Q9Y3P9 1069 aa12.43□□□□□ -0.42
CNTNAP3B-211ENST00000612828 LUZP1Q86V48 1076 aa12.43□□□□□ -0.42
CNTNAP3B-211ENST00000612828 KCTD17Q8N5Z5 321 aa12.43□□□□□ -0.42
CNTNAP3B-211ENST00000612828 MIA2Q96PC5 1412 aa12.43□□□□□ -0.42
CNTNAP3B-211ENST00000612828 ERICH3Q5RHP9 1530 aa12.43□□□□□ -0.42
CNTNAP3B-211ENST00000612828 SPDYE2BA6NHP3 402 aa12.43□□□□□ -0.42
CNTNAP3B-211ENST00000612828 SPDYE6P0CI01 402 aa12.43□□□□□ -0.42
CNTNAP3B-211ENST00000612828 CEP57L1Q8IYX8 460 aa12.43□□□□□ -0.42
CNTNAP3B-211ENST00000612828 SPATA32Q96LK8 384 aa12.43□□□□□ -0.42
CNTNAP3B-211ENST00000612828 PDE6AP16499 860 aa12.42□□□□□ -0.42
CNTNAP3B-211ENST00000612828 KIF6Q6ZMV9 814 aa12.42□□□□□ -0.42
CNTNAP3B-211ENST00000612828 PRG4Q92954 1404 aaPredicted RBP12.42□□□□□ -0.42
CNTNAP3B-211ENST00000612828 SPDYE16A6NNV3 312 aaPredicted RBP12.42□□□□□ -0.42
CNTNAP3B-211ENST00000612828 PSME1Q06323 249 aa12.42□□□□□ -0.42
CNTNAP3B-211ENST00000612828 HLTFQ14527 1009 aaKnown RBP eCLIP12.42□□□□□ -0.42
CNTNAP3B-211ENST00000612828 SPDYE2Q495Y8 402 aa12.42□□□□□ -0.42
CNTNAP3B-211ENST00000612828 XAB2Q9HCS7 855 aaKnown RBP12.42□□□□□ -0.42
CNTNAP3B-211ENST00000612828 NOL7Q9UMY1 257 aaKnown RBP12.42□□□□□ -0.42
CNTNAP3B-211ENST00000612828 TBC1D2BQ9UPU7 963 aa12.42□□□□□ -0.42
CNTNAP3B-211ENST00000612828 IQCGQ9H095 443 aaKnown RBP12.42□□□□□ -0.42
CNTNAP3B-211ENST00000612828 MRPL46Q9H2W6 279 aaKnown RBP12.42□□□□□ -0.42
CNTNAP3B-211ENST00000612828 ME1P48163 572 aa12.42□□□□□ -0.42
CNTNAP3B-211ENST00000612828 ARID5AQ03989 594 aa12.42□□□□□ -0.42
CNTNAP3B-211ENST00000612828 BEGAINQ9BUH8 593 aa12.42□□□□□ -0.42
CNTNAP3B-211ENST00000612828 BZW2Q9Y6E2 419 aaKnown RBP12.42□□□□□ -0.42
CNTNAP3B-211ENST00000612828 H0YC42 278 aa12.41□□□□□ -0.42
CNTNAP3B-211ENST00000612828 KINO60870 393 aaKnown RBP12.41□□□□□ -0.42
CNTNAP3B-211ENST00000612828 NLRP6P59044 892 aa12.41□□□□□ -0.42
CNTNAP3B-211ENST00000612828 FAM160A1Q05DH4 1040 aa12.41□□□□□ -0.42
CNTNAP3B-211ENST00000612828 PPP1R12BO60237 982 aaPredicted RBP12.41□□□□□ -0.42
CNTNAP3B-211ENST00000612828 OLA1Q9NTK5 396 aaKnown RBP12.41□□□□□ -0.42
CNTNAP3B-211ENST00000612828 PLS1Q14651 629 aa12.41□□□□□ -0.42
CNTNAP3B-211ENST00000612828 PDCD2Q16342 344 aaPredicted RBP12.41□□□□□ -0.42
CNTNAP3B-211ENST00000612828 ACTN2P35609 894 aa12.41□□□□□ -0.42
CNTNAP3B-211ENST00000612828 GBP6Q6ZN66 633 aa12.41□□□□□ -0.42
CNTNAP3B-211ENST00000612828 COG3Q96JB2 828 aa12.41□□□□□ -0.42
CNTNAP3B-211ENST00000612828 NACA2Q9H009 215 aa12.41□□□□□ -0.42
CNTNAP3B-211ENST00000612828 SYNDIG1LA6NDD5 238 aa12.41□□□□□ -0.42
CNTNAP3B-211ENST00000612828 SMIM24O75264 130 aa12.41□□□□□ -0.42
CNTNAP3B-211ENST00000612828 PARD3BQ8TEW8 1205 aa12.41□□□□□ -0.42
CNTNAP3B-211ENST00000612828 CCDC69A6NI79 296 aa12.41□□□□□ -0.42
CNTNAP3B-211ENST00000612828 AKNAD1Q5T1N1 836 aa12.41□□□□□ -0.42
CNTNAP3B-211ENST00000612828 MICAL3Q7RTP6 2002 aa12.41□□□□□ -0.42
CNTNAP3B-211ENST00000612828 TTC39AQ5SRH9 613 aa12.4□□□□□ -0.42
CNTNAP3B-211ENST00000612828 MAP3K7CLP57077 242 aa12.4□□□□□ -0.42
CNTNAP3B-211ENST00000612828 CAVIN1Q6NZI2 390 aaKnown RBP12.4□□□□□ -0.42
CNTNAP3B-211ENST00000612828 CRACR2BQ8N4Y2 399 aaPredicted RBP12.4□□□□□ -0.42
CNTNAP3B-211ENST00000612828 ZNF513Q8N8E2 541 aaPredicted RBP12.4□□□□□ -0.42
CNTNAP3B-211ENST00000612828 AMOTL2Q9Y2J4 779 aa12.4□□□□□ -0.42
CNTNAP3B-211ENST00000612828 GOLGA6BA6NDN3 693 aa12.4□□□□□ -0.42
CNTNAP3B-211ENST00000612828 RINLQ6ZS11 566 aa12.4□□□□□ -0.42
CNTNAP3B-211ENST00000612828 NR1H4Q96RI1 486 aaPredicted RBP12.4□□□□□ -0.42
CNTNAP3B-211ENST00000612828 GBP3Q9H0R5 595 aa12.4□□□□□ -0.42
CNTNAP3B-211ENST00000612828 CCDC14Q49A88 953 aa12.4□□□□□ -0.42
CNTNAP3B-211ENST00000612828 API5Q9BZZ5 524 aaKnown RBP12.4□□□□□ -0.42
CNTNAP3B-211ENST00000612828 VPS41P49754 854 aa12.4□□□□□ -0.42
CNTNAP3B-211ENST00000612828 KIAA1107Q9UPP5 1409 aa12.4□□□□□ -0.42
CNTNAP3B-211ENST00000612828 SEMA3FQ13275 785 aa12.4□□□□□ -0.43
CNTNAP3B-211ENST00000612828 PDE3AQ14432 1141 aa12.4□□□□□ -0.43
CNTNAP3B-211ENST00000612828 ZNF397Q8NF99 534 aaPredicted RBP12.4□□□□□ -0.43
CNTNAP3B-211ENST00000612828 RBM46Q8TBY0 533 aaKnown RBP12.4□□□□□ -0.43
CNTNAP3B-211ENST00000612828 CRACR2AQ9BSW2 395 aa12.4□□□□□ -0.43
CNTNAP3B-211ENST00000612828 NUB1Q9Y5A7 615 aa12.4□□□□□ -0.43
CNTNAP3B-211ENST00000612828 TMEM110-MUSTN1A8MSY1 372 aa12.39□□□□□ -0.43
CNTNAP3B-211ENST00000612828 SYTL2Q9HCH5 934 aa12.39□□□□□ -0.43
CNTNAP3B-211ENST00000612828 CUX1P39880 1505 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms