RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 PI4KAP1Q8N8J0 262 aa17.94■□□□□ 0.46
CDH1-213ENST00000612417 PANK2Q9BZ23 570 aa17.94■□□□□ 0.46
CDH1-213ENST00000612417 SRCIN1Q9C0H9 1055 aa17.94■□□□□ 0.46
CDH1-213ENST00000612417 C5P01031 1676 aa17.94■□□□□ 0.46
CDH1-213ENST00000612417 EXOC5O00471 708 aa17.93■□□□□ 0.46
CDH1-213ENST00000612417 DNAAF4Q8WXU2 420 aa17.93■□□□□ 0.46
CDH1-213ENST00000612417 USP44Q9H0E7 712 aa17.93■□□□□ 0.46
CDH1-213ENST00000612417 DDX21Q9NR30 783 aaKnown RBP eCLIP17.93■□□□□ 0.46
CDH1-213ENST00000612417 CCDC9Q9Y3X0 531 aaKnown RBP17.93■□□□□ 0.46
CDH1-213ENST00000612417 PODXL2Q9NZ53 605 aa17.92■□□□□ 0.46
CDH1-213ENST00000612417 LRRFIP2Q9Y608 721 aaKnown RBP17.92■□□□□ 0.46
CDH1-213ENST00000612417 MYL6BP14649 208 aa17.92■□□□□ 0.46
CDH1-213ENST00000612417 AIMP1Q12904 312 aaKnown RBP17.92■□□□□ 0.46
CDH1-213ENST00000612417 KLHL40Q2TBA0 621 aa17.92■□□□□ 0.46
CDH1-213ENST00000612417 IL17RAQ96F46 866 aa17.92■□□□□ 0.46
CDH1-213ENST00000612417 ESYT1Q9BSJ8 1104 aa17.92■□□□□ 0.46
CDH1-213ENST00000612417 TMOD3Q9NYL9 352 aa17.92■□□□□ 0.46
CDH1-213ENST00000612417 USP16Q9Y5T5 823 aa17.92■□□□□ 0.46
CDH1-213ENST00000612417 CERKQ8TCT0 537 aa17.91■□□□□ 0.46
CDH1-213ENST00000612417 SSH3Q8TE77 659 aa17.91■□□□□ 0.46
CDH1-213ENST00000612417 DISP2A7MBM2 1401 aa17.91■□□□□ 0.46
CDH1-213ENST00000612417 UBTFL1P0CB47 393 aaPredicted RBP17.91■□□□□ 0.46
CDH1-213ENST00000612417 ARXQ96QS3 562 aa17.91■□□□□ 0.46
CDH1-213ENST00000612417 PTCD1O75127 700 aaKnown RBP17.9■□□□□ 0.46
CDH1-213ENST00000612417 DDX58O95786 925 aaKnown RBP17.9■□□□□ 0.46
CDH1-213ENST00000612417 ANAPC15P60006 121 aa17.9■□□□□ 0.46
CDH1-213ENST00000612417 MAP3K2Q9Y2U5 619 aa17.9■□□□□ 0.46
CDH1-213ENST00000612417 SPATA31A1Q5TZJ5 1347 aa17.9■□□□□ 0.46
CDH1-213ENST00000612417 EPB41L2O43491 1005 aaKnown RBP17.89■□□□□ 0.45
CDH1-213ENST00000612417 PDIA6Q15084 440 aa17.89■□□□□ 0.45
CDH1-213ENST00000612417 ADCY9O60503 1353 aa17.89■□□□□ 0.45
CDH1-213ENST00000612417 NRAPQ86VF7 1730 aa17.89■□□□□ 0.45
CDH1-213ENST00000612417 MCM2P49736 904 aa17.89■□□□□ 0.45
CDH1-213ENST00000612417 KSR2Q6VAB6 950 aa17.89■□□□□ 0.45
CDH1-213ENST00000612417 JCADQ9P266 1359 aa17.89■□□□□ 0.45
CDH1-213ENST00000612417 RAB11FIP3O75154 756 aa17.88■□□□□ 0.45
CDH1-213ENST00000612417 CHMLP26374 656 aa17.88■□□□□ 0.45
CDH1-213ENST00000612417 PIP4K2AP48426 406 aaPredicted RBP17.88■□□□□ 0.45
CDH1-213ENST00000612417 POLA2Q14181 598 aa17.88■□□□□ 0.45
CDH1-213ENST00000612417 BEND3Q5T5X7 828 aa17.88■□□□□ 0.45
CDH1-213ENST00000612417 GAS2L3Q86XJ1 694 aa17.88■□□□□ 0.45
CDH1-213ENST00000612417 NGLY1Q96IV0 654 aa17.88■□□□□ 0.45
CDH1-213ENST00000612417 C8orf37Q96NL8 207 aa17.88■□□□□ 0.45
CDH1-213ENST00000612417 CDCA7Q9BWT1 371 aaPredicted RBP17.88■□□□□ 0.45
CDH1-213ENST00000612417 RRAGDQ9NQL2 400 aaPredicted RBP17.88■□□□□ 0.45
CDH1-213ENST00000612417 THRAP3Q9Y2W1 955 aaKnown RBP17.88■□□□□ 0.45
CDH1-213ENST00000612417 TOGARAM1Q9Y4F4 1720 aa17.88■□□□□ 0.45
CDH1-213ENST00000612417 TSHZ3Q63HK5 1081 aa17.87■□□□□ 0.45
CDH1-213ENST00000612417 WNK3Q9BYP7 1800 aa17.87■□□□□ 0.45
CDH1-213ENST00000612417 MCCP23508 829 aa17.87■□□□□ 0.45
CDH1-213ENST00000612417 XAGE3Q8WTP9 111 aa17.87■□□□□ 0.45
CDH1-213ENST00000612417 NWD2Q9ULI1 1742 aa17.87■□□□□ 0.45
CDH1-213ENST00000612417 RIC3Q7Z5B4 369 aa17.86■□□□□ 0.45
CDH1-213ENST00000612417 SPATA31A5Q5VU36 1347 aa17.86■□□□□ 0.45
CDH1-213ENST00000612417 SPATA31A7Q8IWB4 1347 aa17.86■□□□□ 0.45
CDH1-213ENST00000612417 DDB1Q16531 1140 aa17.86■□□□□ 0.45
CDH1-213ENST00000612417 COPS6Q7L5N1 327 aa17.86■□□□□ 0.45
CDH1-213ENST00000612417 ZGPATQ8N5A5 531 aaKnown RBP17.86■□□□□ 0.45
CDH1-213ENST00000612417 PIGBQ92521 554 aa17.86■□□□□ 0.45
CDH1-213ENST00000612417 SYTL4Q96C24 671 aaPredicted RBP17.86■□□□□ 0.45
CDH1-213ENST00000612417 DDX49Q9Y6V7 483 aaKnown RBP17.86■□□□□ 0.45
CDH1-213ENST00000612417 ITGB4P16144 1822 aa17.85■□□□□ 0.45
CDH1-213ENST00000612417 PKP1Q13835 747 aa17.85■□□□□ 0.45
CDH1-213ENST00000612417 UBR2Q8IWV8 1755 aa17.85■□□□□ 0.45
CDH1-213ENST00000612417 UNC5CLQ8IV45 518 aa17.84■□□□□ 0.45
CDH1-213ENST00000612417 LMBRD1Q9NUN5 540 aa17.84■□□□□ 0.45
CDH1-213ENST00000612417 SLIT2O94813 1529 aa17.84■□□□□ 0.45
CDH1-213ENST00000612417 LAMB4A4D0S4 1761 aa17.84■□□□□ 0.45
CDH1-213ENST00000612417 A0A0G2JS52 829 aa17.84■□□□□ 0.45
CDH1-213ENST00000612417 TRIM6-TRIM34B2RNG4 842 aa17.84■□□□□ 0.45
CDH1-213ENST00000612417 NEK4P51957 841 aa17.84■□□□□ 0.45
CDH1-213ENST00000612417 CUL4AQ13619 759 aa17.84■□□□□ 0.45
CDH1-213ENST00000612417 PPP1R42Q7Z4L9 355 aa17.84■□□□□ 0.45
CDH1-213ENST00000612417 C9orf78Q9NZ63 289 aaPredicted RBP17.84■□□□□ 0.45
CDH1-213ENST00000612417 ASAP1Q9ULH1 1129 aa17.84■□□□□ 0.45
CDH1-213ENST00000612417 TNS2Q63HR2 1409 aa17.83■□□□□ 0.45
CDH1-213ENST00000612417 PAPPAQ13219 1627 aa17.83■□□□□ 0.45
CDH1-213ENST00000612417 MCTP1Q6DN14 999 aa17.83■□□□□ 0.45
CDH1-213ENST00000612417 RILPL2Q969X0 211 aa17.83■□□□□ 0.45
CDH1-213ENST00000612417 TMX3Q96JJ7 454 aa17.83■□□□□ 0.45
CDH1-213ENST00000612417 ZDHHC9Q9Y397 364 aa17.83■□□□□ 0.45
CDH1-213ENST00000612417 KCPQ6ZWJ8 1503 aa17.83■□□□□ 0.45
CDH1-213ENST00000612417 ALDH1L1O75891 902 aa17.83■□□□□ 0.44
CDH1-213ENST00000612417 NBPF7P0C2Y1 421 aaPredicted RBP17.82■□□□□ 0.44
CDH1-213ENST00000612417 ZNF445P59923 1031 aa17.82■□□□□ 0.44
CDH1-213ENST00000612417 NEXNQ0ZGT2 675 aa17.82■□□□□ 0.44
CDH1-213ENST00000612417 CWF19L2Q2TBE0 894 aaKnown RBP17.82■□□□□ 0.44
CDH1-213ENST00000612417 ANKRD13DQ6ZTN6 518 aa17.82■□□□□ 0.44
CDH1-213ENST00000612417 INTS4Q96HW7 963 aaKnown RBP17.82■□□□□ 0.44
CDH1-213ENST00000612417 ANO2Q9NQ90 1003 aa17.82■□□□□ 0.44
CDH1-213ENST00000612417 RHPN1Q8TCX5 695 aa17.81■□□□□ 0.44
CDH1-213ENST00000612417 KIF1BPQ96EK5 621 aa17.81■□□□□ 0.44
CDH1-213ENST00000612417 PALD1Q9ULE6 856 aa17.81■□□□□ 0.44
CDH1-213ENST00000612417 GLI3P10071 1580 aa17.81■□□□□ 0.44
CDH1-213ENST00000612417 SURF6O75683 361 aaKnown RBP17.81■□□□□ 0.44
CDH1-213ENST00000612417 A1BGP04217 495 aa17.81■□□□□ 0.44
CDH1-213ENST00000612417 CLCN1P35523 988 aa17.81■□□□□ 0.44
CDH1-213ENST00000612417 LINS1Q8NG48 757 aa17.81■□□□□ 0.44
CDH1-213ENST00000612417 PI4K2BQ8TCG2 481 aa17.81■□□□□ 0.44
CDH1-213ENST00000612417 ATG3Q9NT62 314 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms