RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 MYD88Q99836 296 aa12.76□□□□□ -0.37
CDC42EP3-206ENST00000611976 PI4KAP2A4QPH2 592 aa12.75□□□□□ -0.37
CDC42EP3-206ENST00000611976 USHBP1Q8N6Y0 703 aa12.75□□□□□ -0.37
CDC42EP3-206ENST00000611976 PI4KAP1Q8N8J0 262 aa12.75□□□□□ -0.37
CDC42EP3-206ENST00000611976 CEP131Q9UPN4 1083 aa12.75□□□□□ -0.37
CDC42EP3-206ENST00000611976 MAP3K2Q9Y2U5 619 aa12.75□□□□□ -0.37
CDC42EP3-206ENST00000611976 SOS1Q07889 1333 aaPredicted RBP12.75□□□□□ -0.37
CDC42EP3-206ENST00000611976 KIF24Q5T7B8 1368 aa12.75□□□□□ -0.37
CDC42EP3-206ENST00000611976 YTHDC2Q9H6S0 1430 aaKnown RBP12.75□□□□□ -0.37
CDC42EP3-206ENST00000611976 MSH6P52701 1360 aa12.75□□□□□ -0.37
CDC42EP3-206ENST00000611976 TTC41PQ6P2S7 1318 aa12.75□□□□□ -0.37
CDC42EP3-206ENST00000611976 RIMS2Q9UQ26 1411 aa12.75□□□□□ -0.37
CDC42EP3-206ENST00000611976 PPP4R3BQ5MIZ7 849 aa12.75□□□□□ -0.37
CDC42EP3-206ENST00000611976 STIM1Q13586 685 aa12.75□□□□□ -0.37
CDC42EP3-206ENST00000611976 HSP90AB2PQ58FF8 381 aa12.75□□□□□ -0.37
CDC42EP3-206ENST00000611976 FSIP1Q8NA03 581 aa12.75□□□□□ -0.37
CDC42EP3-206ENST00000611976 NEK1Q96PY6 1258 aa12.75□□□□□ -0.37
CDC42EP3-206ENST00000611976 GNL3LQ9NVN8 582 aaKnown RBP12.75□□□□□ -0.37
CDC42EP3-206ENST00000611976 TFIP11Q9UBB9 837 aaKnown RBP12.75□□□□□ -0.37
CDC42EP3-206ENST00000611976 TTC37Q6PGP7 1564 aa12.74□□□□□ -0.37
CDC42EP3-206ENST00000611976 CCDC171Q6TFL3 1326 aa12.74□□□□□ -0.37
CDC42EP3-206ENST00000611976 FAM177A1Q8N128 213 aaPredicted RBP12.74□□□□□ -0.37
CDC42EP3-206ENST00000611976 AMOTL2Q9Y2J4 779 aa12.74□□□□□ -0.37
CDC42EP3-206ENST00000611976 IFIT1P09914 478 aaKnown RBP12.74□□□□□ -0.37
CDC42EP3-206ENST00000611976 ANKLE2Q86XL3 938 aa12.74□□□□□ -0.37
CDC42EP3-206ENST00000611976 CHMLP26374 656 aa12.74□□□□□ -0.37
CDC42EP3-206ENST00000611976 PRDM10Q9NQV6 1147 aa12.74□□□□□ -0.37
CDC42EP3-206ENST00000611976 MPRIPQ6WCQ1 1025 aa12.73□□□□□ -0.37
CDC42EP3-206ENST00000611976 ALDH1L1O75891 902 aa12.73□□□□□ -0.37
CDC42EP3-206ENST00000611976 CCAR1Q8IX12 1150 aaKnown RBP12.73□□□□□ -0.37
CDC42EP3-206ENST00000611976 PHF8Q9UPP1 1060 aa12.73□□□□□ -0.37
CDC42EP3-206ENST00000611976 CCDC150Q8NCX0 1101 aa12.72□□□□□ -0.37
CDC42EP3-206ENST00000611976 ABCA8O94911 1581 aa12.72□□□□□ -0.37
CDC42EP3-206ENST00000611976 MYO5CQ9NQX4 1742 aa12.72□□□□□ -0.37
CDC42EP3-206ENST00000611976 TOP1P11387 765 aaKnown RBP12.72□□□□□ -0.37
CDC42EP3-206ENST00000611976 TXLNBQ8N3L3 684 aa12.72□□□□□ -0.37
CDC42EP3-206ENST00000611976 RBM8AQ9Y5S9 174 aaKnown RBP12.72□□□□□ -0.37
CDC42EP3-206ENST00000611976 FLT4P35916 1363 aa12.72□□□□□ -0.37
CDC42EP3-206ENST00000611976 UBAC1Q9BSL1 405 aa12.72□□□□□ -0.37
CDC42EP3-206ENST00000611976 SAMD9LQ8IVG5 1584 aa12.72□□□□□ -0.37
CDC42EP3-206ENST00000611976 EPS15P42566 896 aa12.72□□□□□ -0.37
CDC42EP3-206ENST00000611976 TERF1P54274 439 aa12.72□□□□□ -0.37
CDC42EP3-206ENST00000611976 CEP135Q66GS9 1140 aa12.72□□□□□ -0.37
CDC42EP3-206ENST00000611976 NUP133Q8WUM0 1156 aa12.72□□□□□ -0.37
CDC42EP3-206ENST00000611976 RBSNQ9H1K0 784 aa12.72□□□□□ -0.37
CDC42EP3-206ENST00000611976 TRPM2O94759 1503 aa12.71□□□□□ -0.37
CDC42EP3-206ENST00000611976 IQCEQ6IPM2 695 aa12.71□□□□□ -0.37
CDC42EP3-206ENST00000611976 GBP3Q9H0R5 595 aa12.71□□□□□ -0.37
CDC42EP3-206ENST00000611976 EDC4Q6P2E9 1401 aaKnown RBP12.71□□□□□ -0.37
CDC42EP3-206ENST00000611976 AOX1Q06278 1338 aa12.71□□□□□ -0.37
CDC42EP3-206ENST00000611976 EPB41L2O43491 1005 aaKnown RBP12.71□□□□□ -0.37
CDC42EP3-206ENST00000611976 AK2P54819 239 aa12.71□□□□□ -0.37
CDC42EP3-206ENST00000611976 ZNF830Q96NB3 372 aaPredicted RBP12.71□□□□□ -0.37
CDC42EP3-206ENST00000611976 TDO2P48775 406 aa12.71□□□□□ -0.38
CDC42EP3-206ENST00000611976 DNM1Q05193 864 aaKnown RBP12.71□□□□□ -0.38
CDC42EP3-206ENST00000611976 ANO6Q4KMQ2 910 aa12.71□□□□□ -0.38
CDC42EP3-206ENST00000611976 AIDAQ96BJ3 306 aa12.71□□□□□ -0.38
CDC42EP3-206ENST00000611976 UHRF1BP1LA0JNW5 1464 aa12.71□□□□□ -0.38
CDC42EP3-206ENST00000611976 ATP10AO60312 1499 aa12.71□□□□□ -0.38
CDC42EP3-206ENST00000611976 ARHGAP29Q52LW3 1261 aa12.71□□□□□ -0.38
CDC42EP3-206ENST00000611976 NECAB1Q8N987 351 aa12.71□□□□□ -0.38
CDC42EP3-206ENST00000611976 RBM33Q96EV2 1170 aaKnown RBP12.71□□□□□ -0.38
CDC42EP3-206ENST00000611976 ZMYND15Q9H091 742 aa12.71□□□□□ -0.38
CDC42EP3-206ENST00000611976 ERVK-7P63135 1459 aa12.7□□□□□ -0.38
CDC42EP3-206ENST00000611976 IL13P35225 146 aa12.7□□□□□ -0.38
CDC42EP3-206ENST00000611976 MTHFSDQ2M296 383 aaKnown RBP12.7□□□□□ -0.38
CDC42EP3-206ENST00000611976 BCORL1Q5H9F3 1711 aa12.7□□□□□ -0.38
CDC42EP3-206ENST00000611976 CASQ1P31415 396 aa12.7□□□□□ -0.38
CDC42EP3-206ENST00000611976 GUCY1B3Q02153 619 aa12.7□□□□□ -0.38
CDC42EP3-206ENST00000611976 SNW1Q13573 536 aaKnown RBP12.7□□□□□ -0.38
CDC42EP3-206ENST00000611976 CHPF2Q9P2E5 772 aa12.7□□□□□ -0.38
CDC42EP3-206ENST00000611976 MYOM2P54296 1465 aa12.7□□□□□ -0.38
CDC42EP3-206ENST00000611976 GOLGA6L9A6NEM1 432 aa12.7□□□□□ -0.38
CDC42EP3-206ENST00000611976 GOLGA8BA8MQT2 603 aa12.7□□□□□ -0.38
CDC42EP3-206ENST00000611976 AXDND1Q5T1B0 1012 aaPredicted RBP12.7□□□□□ -0.38
CDC42EP3-206ENST00000611976 TOM1L2Q6ZVM7 507 aa12.7□□□□□ -0.38
CDC42EP3-206ENST00000611976 CDK5RAP3Q96JB5 506 aa12.7□□□□□ -0.38
CDC42EP3-206ENST00000611976 TRIM34Q9BYJ4 488 aa12.7□□□□□ -0.38
CDC42EP3-206ENST00000611976 LUC7LQ9NQ29 371 aaKnown RBP12.7□□□□□ -0.38
CDC42EP3-206ENST00000611976 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.7□□□□□ -0.38
CDC42EP3-206ENST00000611976 IDH1O75874 414 aaKnown RBP12.69□□□□□ -0.38
CDC42EP3-206ENST00000611976 URI1O94763 535 aaPredicted RBP12.69□□□□□ -0.38
CDC42EP3-206ENST00000611976 TRMT1Q9NXH9 659 aaKnown RBP12.69□□□□□ -0.38
CDC42EP3-206ENST00000611976 ABCC4O15439 1325 aa12.69□□□□□ -0.38
CDC42EP3-206ENST00000611976 RAD50Q92878 1312 aa12.69□□□□□ -0.38
CDC42EP3-206ENST00000611976 CCT2P78371 535 aaKnown RBP12.69□□□□□ -0.38
CDC42EP3-206ENST00000611976 TMC6Q7Z403 805 aa12.69□□□□□ -0.38
CDC42EP3-206ENST00000611976 MPHOSPH8Q99549 860 aa12.69□□□□□ -0.38
CDC42EP3-206ENST00000611976 TTC12Q9H892 705 aaPredicted RBP12.69□□□□□ -0.38
CDC42EP3-206ENST00000611976 DACT1Q9NYF0 836 aa12.69□□□□□ -0.38
CDC42EP3-206ENST00000611976 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.69□□□□□ -0.38
CDC42EP3-206ENST00000611976 CCDC196A0A1B0GTZ2 297 aa12.69□□□□□ -0.38
CDC42EP3-206ENST00000611976 ZNF213O14771 459 aa12.69□□□□□ -0.38
CDC42EP3-206ENST00000611976 CCDC186Q7Z3E2 898 aa12.69□□□□□ -0.38
CDC42EP3-206ENST00000611976 ZRANB1Q9UGI0 708 aa12.69□□□□□ -0.38
CDC42EP3-206ENST00000611976 NPHP3Q7Z494 1330 aa12.69□□□□□ -0.38
CDC42EP3-206ENST00000611976 A0A087WZG4 1122 aa12.69□□□□□ -0.38
CDC42EP3-206ENST00000611976 TNRQ92752 1358 aa12.68□□□□□ -0.38
CDC42EP3-206ENST00000611976 TYRO3Q06418 890 aa12.68□□□□□ -0.38
CDC42EP3-206ENST00000611976 KRT24Q2M2I5 525 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms