RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 TRIM5Q9C035 493 aa15.58■□□□□ 0.08
TCF3-220ENST00000611869 AKAP2Q9Y2D5 859 aa15.58■□□□□ 0.08
TCF3-220ENST00000611869 EXOC5O00471 708 aa15.57■□□□□ 0.08
TCF3-220ENST00000611869 KCNQ3O43525 872 aa15.57■□□□□ 0.08
TCF3-220ENST00000611869 CCDC39Q9UFE4 941 aa15.57■□□□□ 0.08
TCF3-220ENST00000611869 ABCA6Q8N139 1617 aa15.57■□□□□ 0.08
TCF3-220ENST00000611869 ARHGEF10O15013 1369 aa15.57■□□□□ 0.08
TCF3-220ENST00000611869 RBM25P49756 843 aaKnown RBP15.57■□□□□ 0.08
TCF3-220ENST00000611869 ZGPATQ8N5A5 531 aaKnown RBP15.57■□□□□ 0.08
TCF3-220ENST00000611869 CHMLP26374 656 aa15.57■□□□□ 0.08
TCF3-220ENST00000611869 ZSCAN25Q6NSZ9 544 aa15.57■□□□□ 0.08
TCF3-220ENST00000611869 TNMDQ9H2S6 317 aa15.57■□□□□ 0.08
TCF3-220ENST00000611869 DDX21Q9NR30 783 aaKnown RBP eCLIP15.57■□□□□ 0.08
TCF3-220ENST00000611869 SH2B1Q9NRF2 756 aaPredicted RBP15.57■□□□□ 0.08
TCF3-220ENST00000611869 U3KPZ7 1027 aaPredicted RBP15.57■□□□□ 0.08
TCF3-220ENST00000611869 PLEKHG1Q9ULL1 1385 aa15.56■□□□□ 0.08
TCF3-220ENST00000611869 ZNF396Q96N95 335 aaPredicted RBP15.56■□□□□ 0.08
TCF3-220ENST00000611869 ABCF2Q9UG63 623 aa15.56■□□□□ 0.08
TCF3-220ENST00000611869 KIAA0232Q92628 1395 aa15.56■□□□□ 0.08
TCF3-220ENST00000611869 PPFIA3O75145 1194 aa15.56■□□□□ 0.08
TCF3-220ENST00000611869 SPC24Q8NBT2 197 aa15.56■□□□□ 0.08
TCF3-220ENST00000611869 R3HCC1Q9Y3T6 440 aaKnown RBP15.56■□□□□ 0.08
TCF3-220ENST00000611869 CCDC192P0DO97 292 aa15.55■□□□□ 0.08
TCF3-220ENST00000611869 IMMTQ16891 758 aaKnown RBP15.55■□□□□ 0.08
TCF3-220ENST00000611869 ZNF790Q6PG37 636 aa15.55■□□□□ 0.08
TCF3-220ENST00000611869 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.55■□□□□ 0.08
TCF3-220ENST00000611869 LDHAL6AQ6ZMR3 332 aa15.55■□□□□ 0.08
TCF3-220ENST00000611869 RBM27Q9P2N5 1060 aaKnown RBP15.55■□□□□ 0.08
TCF3-220ENST00000611869 ESPNB1AK53 854 aa15.55■□□□□ 0.08
TCF3-220ENST00000611869 GNL3LQ9NVN8 582 aaKnown RBP15.55■□□□□ 0.08
TCF3-220ENST00000611869 CEP152O94986 1710 aa15.55■□□□□ 0.08
TCF3-220ENST00000611869 GLI2P10070 1586 aa15.55■□□□□ 0.08
TCF3-220ENST00000611869 NECAB1Q8N987 351 aa15.55■□□□□ 0.08
TCF3-220ENST00000611869 NACAP1Q9BZK3 213 aa15.55■□□□□ 0.08
TCF3-220ENST00000611869 LRP2BPQ9P2M1 347 aa15.55■□□□□ 0.08
TCF3-220ENST00000611869 ADGRB3O60242 1522 aa15.55■□□□□ 0.08
TCF3-220ENST00000611869 A2ML1A8K2U0 1454 aa15.55■□□□□ 0.08
TCF3-220ENST00000611869 DCAF5Q96JK2 942 aa15.54■□□□□ 0.08
TCF3-220ENST00000611869 BICC1Q9H694 974 aaKnown RBP15.54■□□□□ 0.08
TCF3-220ENST00000611869 GJB2P29033 226 aa15.54■□□□□ 0.08
TCF3-220ENST00000611869 TDO2P48775 406 aa15.54■□□□□ 0.08
TCF3-220ENST00000611869 EIF4A1P60842 406 aaKnown RBP15.54■□□□□ 0.08
TCF3-220ENST00000611869 AIDAQ96BJ3 306 aa15.54■□□□□ 0.08
TCF3-220ENST00000611869 IGHMBP2P38935 993 aaKnown RBP15.54■□□□□ 0.08
TCF3-220ENST00000611869 HSP90AA2PQ14568 343 aaPredicted RBP15.54■□□□□ 0.08
TCF3-220ENST00000611869 BABAM1Q9NWV8 329 aa15.54■□□□□ 0.08
TCF3-220ENST00000611869 RBM8AQ9Y5S9 174 aaKnown RBP15.54■□□□□ 0.08
TCF3-220ENST00000611869 USP6P35125 1406 aa15.54■□□□□ 0.08
TCF3-220ENST00000611869 STX6O43752 255 aa15.54■□□□□ 0.08
TCF3-220ENST00000611869 KLHDC4Q8TBB5 520 aa15.54■□□□□ 0.08
TCF3-220ENST00000611869 GUCY1B3Q02153 619 aa15.53■□□□□ 0.08
TCF3-220ENST00000611869 NUP133Q8WUM0 1156 aa15.53■□□□□ 0.08
TCF3-220ENST00000611869 ANAPC15P60006 121 aa15.53■□□□□ 0.08
TCF3-220ENST00000611869 CAMK4Q16566 473 aa15.53■□□□□ 0.08
TCF3-220ENST00000611869 VPS53Q5VIR6 699 aa15.53■□□□□ 0.08
TCF3-220ENST00000611869 FAM13BQ9NYF5 915 aa15.53■□□□□ 0.08
TCF3-220ENST00000611869 RAI14Q9P0K7 980 aa15.53■□□□□ 0.08
TCF3-220ENST00000611869 RTL1A6NKG5 1358 aa15.53■□□□□ 0.08
TCF3-220ENST00000611869 ZNF853P0CG23 659 aa15.53■□□□□ 0.08
TCF3-220ENST00000611869 GSPT1P15170 499 aaKnown RBP15.53■□□□□ 0.08
TCF3-220ENST00000611869 CCT2P78371 535 aaKnown RBP15.53■□□□□ 0.08
TCF3-220ENST00000611869 NUP62CLQ9H1M0 184 aa15.53■□□□□ 0.08
TCF3-220ENST00000611869 HAND2P61296 217 aa15.52■□□□□ 0.08
TCF3-220ENST00000611869 KLHL40Q2TBA0 621 aa15.52■□□□□ 0.08
TCF3-220ENST00000611869 USP44Q9H0E7 712 aa15.52■□□□□ 0.08
TCF3-220ENST00000611869 TFIP11Q9UBB9 837 aaKnown RBP15.52■□□□□ 0.08
TCF3-220ENST00000611869 ANKRD18BA2A2Z9 1011 aa15.52■□□□□ 0.07
TCF3-220ENST00000611869 PHF23Q9BUL5 403 aaPredicted RBP15.52■□□□□ 0.07
TCF3-220ENST00000611869 HOOK1Q9UJC3 728 aaKnown RBP15.52■□□□□ 0.07
TCF3-220ENST00000611869 LRRC2Q9BYS8 371 aa15.52■□□□□ 0.07
TCF3-220ENST00000611869 PPRC1Q5VV67 1664 aaKnown RBP15.52■□□□□ 0.07
TCF3-220ENST00000611869 HOXB7P09629 217 aa15.51■□□□□ 0.07
TCF3-220ENST00000611869 IL2RBP14784 551 aa15.51■□□□□ 0.07
TCF3-220ENST00000611869 RAB3GAP1Q15042 981 aa15.51■□□□□ 0.07
TCF3-220ENST00000611869 HSP90AB3PQ58FF7 597 aa15.51■□□□□ 0.07
TCF3-220ENST00000611869 CFAP45Q9UL16 551 aa15.51■□□□□ 0.07
TCF3-220ENST00000611869 NLRP1Q9C000 1473 aa15.51■□□□□ 0.07
TCF3-220ENST00000611869 XBP1P17861 261 aa15.51■□□□□ 0.07
TCF3-220ENST00000611869 NMIQ13287 307 aaPredicted RBP15.51■□□□□ 0.07
TCF3-220ENST00000611869 CCDC69A6NI79 296 aa15.51■□□□□ 0.07
TCF3-220ENST00000611869 PANK2Q9BZ23 570 aa15.51■□□□□ 0.07
TCF3-220ENST00000611869 BCL11BQ9C0K0 894 aaPredicted RBP15.51■□□□□ 0.07
TCF3-220ENST00000611869 TEX13AQ9BXU3 409 aaPredicted RBP15.5■□□□□ 0.07
TCF3-220ENST00000611869 NAT10Q9H0A0 1025 aaKnown RBP15.5■□□□□ 0.07
TCF3-220ENST00000611869 TTC41PQ6P2S7 1318 aa15.5■□□□□ 0.07
TCF3-220ENST00000611869 CPA1P15085 419 aa15.5■□□□□ 0.07
TCF3-220ENST00000611869 ZNF496Q96IT1 587 aaPredicted RBP15.5■□□□□ 0.07
TCF3-220ENST00000611869 NEK1Q96PY6 1258 aa15.5■□□□□ 0.07
TCF3-220ENST00000611869 IGSF1Q8N6C5 1336 aa15.5■□□□□ 0.07
TCF3-220ENST00000611869 TRIM22Q8IYM9 498 aa15.5■□□□□ 0.07
TCF3-220ENST00000611869 INO80Q9ULG1 1556 aaPredicted RBP15.49■□□□□ 0.07
TCF3-220ENST00000611869 XRCC6P12956 609 aaKnown RBP eCLIP15.49■□□□□ 0.073e-6■■■□□ 19
TCF3-220ENST00000611869 TFCP2Q12800 502 aa15.49■□□□□ 0.07
TCF3-220ENST00000611869 BRF1Q92994 677 aa15.49■□□□□ 0.07
TCF3-220ENST00000611869 RAB11FIP4Q86YS3 637 aa15.48■□□□□ 0.07
TCF3-220ENST00000611869 ALKQ9UM73 1620 aa15.48■□□□□ 0.07
TCF3-220ENST00000611869 LMTK2Q8IWU2 1503 aa15.48■□□□□ 0.07
TCF3-220ENST00000611869 BRMS1Q9HCU9 246 aa15.48■□□□□ 0.07
TCF3-220ENST00000611869 ZNF213O14771 459 aa15.48■□□□□ 0.07
TCF3-220ENST00000611869 CLSTN1O94985 981 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms