RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 LTV1Q96GA3 475 aaPredicted RBP9.43□□□□□ -0.9
CBWD1-219ENST00000611457 CRAMP1Q96RY5 1269 aa9.43□□□□□ -0.9
CBWD1-219ENST00000611457 DDX21Q9NR30 783 aaKnown RBP eCLIP9.43□□□□□ -0.9
CBWD1-219ENST00000611457 BTBD11A6QL63 1104 aa9.43□□□□□ -0.9
CBWD1-219ENST00000611457 C15orf52Q6ZUT6 534 aaKnown RBP9.43□□□□□ -0.9
CBWD1-219ENST00000611457 MIER1Q8N108 512 aa9.43□□□□□ -0.9
CBWD1-219ENST00000611457 NYXQ9GZU5 481 aa9.43□□□□□ -0.9
CBWD1-219ENST00000611457 KIF16BQ96L93 1317 aa9.42□□□□□ -0.9
CBWD1-219ENST00000611457 ZNF652Q9Y2D9 606 aa9.42□□□□□ -0.9
CBWD1-219ENST00000611457 NBPF26B4DH59 902 aa9.42□□□□□ -0.9
CBWD1-219ENST00000611457 FAM182BQ5T319 152 aa9.42□□□□□ -0.9
CBWD1-219ENST00000611457 NBPF10Q6P3W6 841 aaKnown RBP9.42□□□□□ -0.9
CBWD1-219ENST00000611457 NBPF15Q8N660 670 aa9.42□□□□□ -0.9
CBWD1-219ENST00000611457 PSMD1Q99460 953 aa9.42□□□□□ -0.9
CBWD1-219ENST00000611457 MPRIPQ6WCQ1 1025 aa9.41□□□□□ -0.9
CBWD1-219ENST00000611457 GIGYF2Q6Y7W6 1299 aaKnown RBP9.41□□□□□ -0.9
CBWD1-219ENST00000611457 DNAJC10Q8IXB1 793 aa9.41□□□□□ -0.9
CBWD1-219ENST00000611457 HYPKQ9NX55 129 aa9.41□□□□□ -0.9
CBWD1-219ENST00000611457 TEFQ10587 303 aa9.4□□□□□ -0.9
CBWD1-219ENST00000611457 L3MBTL3Q96JM7 780 aaPredicted RBP9.4□□□□□ -0.9
CBWD1-219ENST00000611457 TFCP2L1Q9NZI6 479 aa9.4□□□□□ -0.9
CBWD1-219ENST00000611457 NTSR2O95665 410 aa9.39□□□□□ -0.91
CBWD1-219ENST00000611457 PDE6BP35913 854 aa9.39□□□□□ -0.91
CBWD1-219ENST00000611457 TTC5Q8N0Z6 440 aa9.39□□□□□ -0.91
CBWD1-219ENST00000611457 MAPK8IP3Q9UPT6 1336 aa9.39□□□□□ -0.91
CBWD1-219ENST00000611457 U2AF1L5P0DN76 240 aaPredicted RBP9.39□□□□□ -0.91
CBWD1-219ENST00000611457 U2AF1Q01081 240 aaKnown RBP eCLIP9.39□□□□□ -0.91
CBWD1-219ENST00000611457 SF3B3Q15393 1217 aaKnown RBP9.39□□□□□ -0.91
CBWD1-219ENST00000611457 RTF1Q92541 710 aaKnown RBP9.39□□□□□ -0.91
CBWD1-219ENST00000611457 COL4A5P29400 1685 aa9.39□□□□□ -0.91
CBWD1-219ENST00000611457 GNPATO15228 680 aa9.39□□□□□ -0.91
CBWD1-219ENST00000611457 HSP90B1P14625 803 aaKnown RBP9.39□□□□□ -0.91
CBWD1-219ENST00000611457 PLBD2Q8NHP8 589 aa9.39□□□□□ -0.91
CBWD1-219ENST00000611457 FHDC1Q9C0D6 1143 aaPredicted RBP9.39□□□□□ -0.91
CBWD1-219ENST00000611457 ZBTB1Q9Y2K1 713 aa9.39□□□□□ -0.91
CBWD1-219ENST00000611457 IRS2Q9Y4H2 1338 aa9.39□□□□□ -0.91
CBWD1-219ENST00000611457 SUPT16HQ9Y5B9 1047 aaKnown RBP9.39□□□□□ -0.91
CBWD1-219ENST00000611457 ALDH1L2Q3SY69 923 aa9.38□□□□□ -0.91
CBWD1-219ENST00000611457 TSHZ2Q9NRE2 1034 aa9.38□□□□□ -0.91
CBWD1-219ENST00000611457 CDK5RAP2Q96SN8 1893 aa9.38□□□□□ -0.91
CBWD1-219ENST00000611457 NFIXQ14938 502 aa9.38□□□□□ -0.91
CBWD1-219ENST00000611457 PODXL2Q9NZ53 605 aa9.38□□□□□ -0.91
CBWD1-219ENST00000611457 HMOX1P09601 288 aa9.37□□□□□ -0.91
CBWD1-219ENST00000611457 ADAMTS8Q9UP79 889 aa9.37□□□□□ -0.91
CBWD1-219ENST00000611457 FKBP1AP62942 108 aaKnown RBP9.37□□□□□ -0.91
CBWD1-219ENST00000611457 PARP3Q9Y6F1 533 aa9.37□□□□□ -0.91
CBWD1-219ENST00000611457 NEFMP07197 916 aa9.36□□□□□ -0.91
CBWD1-219ENST00000611457 NPR1P16066 1061 aa9.36□□□□□ -0.91
CBWD1-219ENST00000611457 COL2A1P02458 1487 aaPredicted RBP9.36□□□□□ -0.91
CBWD1-219ENST00000611457 A0A0G2JS52 829 aa9.36□□□□□ -0.91
CBWD1-219ENST00000611457 SOX12O15370 315 aa9.36□□□□□ -0.91
CBWD1-219ENST00000611457 ERICH6Q7L0X2 663 aa9.36□□□□□ -0.91
CBWD1-219ENST00000611457 WWC1Q8IX03 1113 aa9.36□□□□□ -0.91
CBWD1-219ENST00000611457 DBF4Q9UBU7 674 aaPredicted RBP9.36□□□□□ -0.91
CBWD1-219ENST00000611457 CASP7P55210 303 aa9.36□□□□□ -0.91
CBWD1-219ENST00000611457 ARHGAP45Q92619 1136 aa9.36□□□□□ -0.91
CBWD1-219ENST00000611457 SRGNP10124 158 aa9.35□□□□□ -0.91
CBWD1-219ENST00000611457 RFC4P35249 363 aa9.35□□□□□ -0.91
CBWD1-219ENST00000611457 PRR5LQ6MZQ0 368 aa9.35□□□□□ -0.91
CBWD1-219ENST00000611457 PGAP2Q9UHJ9 254 aa9.35□□□□□ -0.91
CBWD1-219ENST00000611457 PTPRCP08575 1304 aa9.35□□□□□ -0.91
CBWD1-219ENST00000611457 RIPK4P57078 832 aa9.35□□□□□ -0.91
CBWD1-219ENST00000611457 MASTLQ96GX5 879 aa9.35□□□□□ -0.91
CBWD1-219ENST00000611457 LOC285556D6RIA3 1793 aa9.35□□□□□ -0.91
CBWD1-219ENST00000611457 CNKSR1Q969H4 720 aa9.34□□□□□ -0.91
CBWD1-219ENST00000611457 PDGFDQ9GZP0 370 aaPredicted RBP9.34□□□□□ -0.91
CBWD1-219ENST00000611457 ZBTB7CA1YPR0 619 aa9.34□□□□□ -0.91
CBWD1-219ENST00000611457 PSDA5PKW4 1024 aaPredicted RBP9.34□□□□□ -0.91
CBWD1-219ENST00000611457 FKBP8Q14318 412 aa9.34□□□□□ -0.91
CBWD1-219ENST00000611457 MBIPQ9NS73 344 aa9.34□□□□□ -0.91
CBWD1-219ENST00000611457 FBXO3Q9UK99 471 aa9.34□□□□□ -0.91
CBWD1-219ENST00000611457 PDS5AQ29RF7 1337 aaKnown RBP9.34□□□□□ -0.91
CBWD1-219ENST00000611457 ABCC12Q96J65 1359 aa9.34□□□□□ -0.91
CBWD1-219ENST00000611457 YBX3P16989 372 aaKnown RBP eCLIP9.34□□□□□ -0.91
CBWD1-219ENST00000611457 TCIRG1Q13488 830 aa9.34□□□□□ -0.91
CBWD1-219ENST00000611457 UBN2Q6ZU65 1347 aa9.34□□□□□ -0.91
CBWD1-219ENST00000611457 OTOFQ9HC10 1997 aa9.34□□□□□ -0.92
CBWD1-219ENST00000611457 FSTL1Q12841 308 aa9.33□□□□□ -0.92
CBWD1-219ENST00000611457 TMED8Q6PL24 325 aaPredicted RBP9.33□□□□□ -0.92
CBWD1-219ENST00000611457 CCDC191Q8NCU4 936 aa9.33□□□□□ -0.92
CBWD1-219ENST00000611457 SCN9AQ15858 1988 aa9.33□□□□□ -0.92
CBWD1-219ENST00000611457 PCCAP05165 728 aaPredicted RBP9.33□□□□□ -0.92
CBWD1-219ENST00000611457 MMP10P09238 476 aa9.33□□□□□ -0.92
CBWD1-219ENST00000611457 WDR43Q15061 677 aaKnown RBP eCLIP9.33□□□□□ -0.92
CBWD1-219ENST00000611457 RBM46Q8TBY0 533 aaKnown RBP9.33□□□□□ -0.92
CBWD1-219ENST00000611457 ZPR1O75312 459 aa9.33□□□□□ -0.92
CBWD1-219ENST00000611457 SERPINB2P05120 415 aa9.33□□□□□ -0.92
CBWD1-219ENST00000611457 PIM2Q9P1W9 311 aa9.33□□□□□ -0.92
CBWD1-219ENST00000611457 TBC1D9BQ66K14 1250 aa9.32□□□□□ -0.92
CBWD1-219ENST00000611457 USP16Q9Y5T5 823 aa9.32□□□□□ -0.92
CBWD1-219ENST00000611457 MYH7P12883 1935 aa9.32□□□□□ -0.92
CBWD1-219ENST00000611457 USPL1Q5W0Q7 1092 aa9.32□□□□□ -0.92
CBWD1-219ENST00000611457 DZIP3Q86Y13 1208 aaKnown RBP9.32□□□□□ -0.92
CBWD1-219ENST00000611457 PHIPQ8WWQ0 1821 aa9.31□□□□□ -0.92
CBWD1-219ENST00000611457 UNCXA6NJT0 531 aa9.31□□□□□ -0.92
CBWD1-219ENST00000611457 U2SURPO15042 1029 aaKnown RBP9.31□□□□□ -0.92
CBWD1-219ENST00000611457 ALDH1L1O75891 902 aa9.31□□□□□ -0.92
CBWD1-219ENST00000611457 CSF1RP07333 972 aa9.31□□□□□ -0.92
CBWD1-219ENST00000611457 ST5P78524 1137 aa9.31□□□□□ -0.92
CBWD1-219ENST00000611457 PPP1R42Q7Z4L9 355 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms