RNA–Protein interactions for RNA: ENST00000608426.1

LINC00343-211, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 709 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-211ENST00000608426 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.22□□□□□ -0.61
LINC00343-211ENST00000608426 RTN1Q16799 776 aa11.21□□□□□ -0.61
LINC00343-211ENST00000608426 C7orf43Q8WVR3 580 aa11.21□□□□□ -0.61
LINC00343-211ENST00000608426 HSH2DQ96JZ2 352 aa11.21□□□□□ -0.61
LINC00343-211ENST00000608426 CNTNAP3BQ96NU0 1288 aa11.21□□□□□ -0.61
LINC00343-211ENST00000608426 CNTNAP3Q9BZ76 1288 aa11.21□□□□□ -0.61
LINC00343-211ENST00000608426 PHF24Q9UPV7 400 aa11.21□□□□□ -0.61
LINC00343-211ENST00000608426 ATXN7O15265 892 aaPredicted RBP11.2□□□□□ -0.62
LINC00343-211ENST00000608426 RNFT1Q5M7Z0 435 aa11.2□□□□□ -0.62
LINC00343-211ENST00000608426 ABHD17AQ96GS6 310 aa11.2□□□□□ -0.62
LINC00343-211ENST00000608426 QTRT2Q9H974 415 aaKnown RBP11.2□□□□□ -0.62
LINC00343-211ENST00000608426 PCDHGC4Q9Y5F7 938 aa11.2□□□□□ -0.62
LINC00343-211ENST00000608426 KRT76Q01546 638 aa11.19□□□□□ -0.62
LINC00343-211ENST00000608426 GAS6Q14393 721 aa11.19□□□□□ -0.62
LINC00343-211ENST00000608426 SUSD3Q96L08 255 aa11.19□□□□□ -0.62
LINC00343-211ENST00000608426 ANKIB1Q9P2G1 1089 aa11.19□□□□□ -0.62
LINC00343-211ENST00000608426 DCDC2BA2VCK2 349 aa11.18□□□□□ -0.62
LINC00343-211ENST00000608426 KHNYNO15037 678 aaKnown RBP11.18□□□□□ -0.62
LINC00343-211ENST00000608426 BNIP3LO60238 219 aa11.18□□□□□ -0.62
LINC00343-211ENST00000608426 HIF1AQ16665 826 aa11.18□□□□□ -0.62
LINC00343-211ENST00000608426 ZNF280CQ8ND82 737 aa11.18□□□□□ -0.62
LINC00343-211ENST00000608426 CFHR5Q9BXR6 569 aa11.18□□□□□ -0.62
LINC00343-211ENST00000608426 ATXN7L1Q9ULK2 861 aaPredicted RBP11.18□□□□□ -0.62
LINC00343-211ENST00000608426 PTCD1O75127 700 aaKnown RBP11.17□□□□□ -0.62
LINC00343-211ENST00000608426 DGKZQ13574 1117 aa11.17□□□□□ -0.62
LINC00343-211ENST00000608426 NAA30Q147X3 362 aaPredicted RBP11.17□□□□□ -0.62
LINC00343-211ENST00000608426 CAPN12Q6ZSI9 719 aa11.17□□□□□ -0.62
LINC00343-211ENST00000608426 KLK14Q9P0G3 267 aa11.17□□□□□ -0.62
LINC00343-211ENST00000608426 WIPF1O43516 503 aa11.16□□□□□ -0.62
LINC00343-211ENST00000608426 SAMD5Q5TGI4 173 aa11.16□□□□□ -0.62
LINC00343-211ENST00000608426 MYO19Q96H55 970 aa11.16□□□□□ -0.62
LINC00343-211ENST00000608426 MBIPQ9NS73 344 aa11.16□□□□□ -0.62
LINC00343-211ENST00000608426 NDFIP2Q9NV92 336 aa11.16□□□□□ -0.62
LINC00343-211ENST00000608426 FAM157BP0CG42 384 aa11.15□□□□□ -0.62
LINC00343-211ENST00000608426 MAPTP10636 758 aaKnown RBP11.15□□□□□ -0.62
LINC00343-211ENST00000608426 MX2P20592 715 aa11.15□□□□□ -0.62
LINC00343-211ENST00000608426 SSFA2P28290 1259 aa11.15□□□□□ -0.62
LINC00343-211ENST00000608426 SCNN1AP37088 669 aa11.15□□□□□ -0.62
LINC00343-211ENST00000608426 PDE4CQ08493 712 aa11.15□□□□□ -0.62
LINC00343-211ENST00000608426 COL26A1Q96A83 441 aa11.15□□□□□ -0.62
LINC00343-211ENST00000608426 FGFR3P22607 806 aa11.14□□□□□ -0.63
LINC00343-211ENST00000608426 TNP2Q05952 138 aa11.14□□□□□ -0.63
LINC00343-211ENST00000608426 COX20Q5RI15 118 aa11.14□□□□□ -0.63
LINC00343-211ENST00000608426 C16orf46Q6P387 395 aa11.14□□□□□ -0.63
LINC00343-211ENST00000608426 CEP63Q96MT8 703 aa11.14□□□□□ -0.63
LINC00343-211ENST00000608426 SAP130Q9H0E3 1048 aa11.14□□□□□ -0.63
LINC00343-211ENST00000608426 LRFN2Q9ULH4 789 aa11.14□□□□□ -0.63
LINC00343-211ENST00000608426 C11orf91Q3C1V1 193 aa11.13□□□□□ -0.63
LINC00343-211ENST00000608426 SEPT3Q9UH03 358 aa11.13□□□□□ -0.63
LINC00343-211ENST00000608426 TGFBR3LH3BV60 316 aa11.12□□□□□ -0.63
LINC00343-211ENST00000608426 CD33P20138 364 aa11.12□□□□□ -0.63
LINC00343-211ENST00000608426 NSFL1CQ9UNZ2 370 aaKnown RBP11.12□□□□□ -0.63
LINC00343-211ENST00000608426 BCS1LQ9Y276 419 aa11.12□□□□□ -0.63
LINC00343-211ENST00000608426 B4GALNT3Q6L9W6 998 aa11.11□□□□□ -0.63
LINC00343-211ENST00000608426 BTLAQ7Z6A9 289 aa11.11□□□□□ -0.63
LINC00343-211ENST00000608426 BRD7Q9NPI1 651 aa11.11□□□□□ -0.63
LINC00343-211ENST00000608426 IGF1RP08069 1367 aa11.11□□□□□ -0.63
LINC00343-211ENST00000608426 BMP4P12644 408 aa11.1□□□□□ -0.63
LINC00343-211ENST00000608426 CTBSQ01459 385 aa11.1□□□□□ -0.63
LINC00343-211ENST00000608426 SRSF11Q05519 484 aaKnown RBP11.1□□□□□ -0.63
LINC00343-211ENST00000608426 TYRO3Q06418 890 aa11.1□□□□□ -0.63
LINC00343-211ENST00000608426 PHLDB3Q6NSJ2 640 aa11.1□□□□□ -0.63
LINC00343-211ENST00000608426 STRN4Q9NRL3 753 aa11.1□□□□□ -0.63
LINC00343-211ENST00000608426 MARK1Q9P0L2 795 aa11.1□□□□□ -0.63
LINC00343-211ENST00000608426 EFSO43281 561 aa11.09□□□□□ -0.63
LINC00343-211ENST00000608426 ADAMTS2O95450 1211 aa11.09□□□□□ -0.63
LINC00343-211ENST00000608426 IER5Q5VY09 327 aa11.09□□□□□ -0.63
LINC00343-211ENST00000608426 IFT43Q96FT9 208 aa11.09□□□□□ -0.63
LINC00343-211ENST00000608426 INSM1Q01101 510 aaPredicted RBP11.08□□□□□ -0.64
LINC00343-211ENST00000608426 LAMC2Q13753 1193 aa11.08□□□□□ -0.64
LINC00343-211ENST00000608426 HCN2Q9UL51 889 aa11.08□□□□□ -0.64
LINC00343-211ENST00000608426 BRD2P25440 801 aaKnown RBP11.07□□□□□ -0.64
LINC00343-211ENST00000608426 IDH3AP50213 366 aa11.07□□□□□ -0.64
LINC00343-211ENST00000608426 SFSWAPQ12872 951 aaKnown RBP11.07□□□□□ -0.64
LINC00343-211ENST00000608426 DMGDHQ9UI17 866 aaKnown RBP11.07□□□□□ -0.64
LINC00343-211ENST00000608426 MTMR7Q9Y216 660 aa11.07□□□□□ -0.64
LINC00343-211ENST00000608426 C2CD2LO14523 706 aa11.06□□□□□ -0.64
LINC00343-211ENST00000608426 MICAL2O94851 1124 aa11.06□□□□□ -0.64
LINC00343-211ENST00000608426 MAP2K3P46734 347 aa11.06□□□□□ -0.64
LINC00343-211ENST00000608426 TNFRSF10BO14763 440 aa11.05□□□□□ -0.64
LINC00343-211ENST00000608426 SLURP2P0DP57 97 aa11.05□□□□□ -0.64
LINC00343-211ENST00000608426 FAM182BQ5T319 152 aa11.05□□□□□ -0.64
LINC00343-211ENST00000608426 TREML1Q86YW5 311 aa11.05□□□□□ -0.64
LINC00343-211ENST00000608426 GTF3C2Q8WUA4 911 aaPredicted RBP11.05□□□□□ -0.64
LINC00343-211ENST00000608426 KCNH4Q9UQ05 1017 aa11.05□□□□□ -0.64
LINC00343-211ENST00000608426 GRIN2CQ14957 1233 aa11.04□□□□□ -0.64
LINC00343-211ENST00000608426 ETFBKMTQ8IXQ9 262 aa11.04□□□□□ -0.64
LINC00343-211ENST00000608426 ZSCAN1Q8NBB4 408 aa11.04□□□□□ -0.64
LINC00343-211ENST00000608426 STIM2Q9P246 746 aa11.04□□□□□ -0.64
LINC00343-211ENST00000608426 PRR12Q9ULL5 1215 aa11.04□□□□□ -0.64
LINC00343-211ENST00000608426 EPB42P16452 691 aa11.03□□□□□ -0.64
LINC00343-211ENST00000608426 ARSDP51689 593 aa11.03□□□□□ -0.64
LINC00343-211ENST00000608426 ABL1P00519 1130 aa11.02□□□□□ -0.65
LINC00343-211ENST00000608426 INPP5BP32019 993 aa11.02□□□□□ -0.65
LINC00343-211ENST00000608426 FAM26DQ5JW98 314 aa11.02□□□□□ -0.65
LINC00343-211ENST00000608426 HELQQ8TDG4 1101 aa11.02□□□□□ -0.65
LINC00343-211ENST00000608426 WHAMMQ8TF30 809 aa11.02□□□□□ -0.65
LINC00343-211ENST00000608426 OXCT2Q9BYC2 517 aaPredicted RBP11.02□□□□□ -0.65
LINC00343-211ENST00000608426 ARID4AP29374 1257 aaPredicted RBP11.01□□□□□ -0.65
LINC00343-211ENST00000608426 KCNQ4P56696 695 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms