RNA–Protein interactions for RNA: ENST00000606769.1

SNORA28-201, Transcript of small nucleolar RNA, H/ACA box 28, humanhuman

BASIC

Gene SNORA28, Length 126 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA28-201ENST00000606769 A0A1W2PNR3 127 aa3.06□□□□□ -1.92
SNORA28-201ENST00000606769 FZD6O60353 706 aa3.06□□□□□ -1.92
SNORA28-201ENST00000606769 PTCD1O75127 700 aaKnown RBP3.06□□□□□ -1.92
SNORA28-201ENST00000606769 PPFIA3O75145 1194 aa3.06□□□□□ -1.92
SNORA28-201ENST00000606769 F11P03951 625 aa3.06□□□□□ -1.92
SNORA28-201ENST00000606769 MPSTP25325 297 aa3.06□□□□□ -1.92
SNORA28-201ENST00000606769 PDE4CQ08493 712 aa3.06□□□□□ -1.92
SNORA28-201ENST00000606769 ATCAYQ86WG3 371 aa3.06□□□□□ -1.92
SNORA28-201ENST00000606769 GPR161Q8N6U8 529 aaKnown RBP3.06□□□□□ -1.92
SNORA28-201ENST00000606769 KIFC2Q96AC6 838 aa3.06□□□□□ -1.92
SNORA28-201ENST00000606769 ZNF837Q96EG3 531 aaPredicted RBP3.06□□□□□ -1.92
SNORA28-201ENST00000606769 GZF1Q9H116 711 aaPredicted RBP3.06□□□□□ -1.92
SNORA28-201ENST00000606769 GPAMQ9HCL2 828 aa3.06□□□□□ -1.92
SNORA28-201ENST00000606769 STRN4Q9NRL3 753 aa3.06□□□□□ -1.92
SNORA28-201ENST00000606769 H3BRB1 525 aa3.05□□□□□ -1.92
SNORA28-201ENST00000606769 EFSO43281 561 aa3.05□□□□□ -1.92
SNORA28-201ENST00000606769 ABL1P00519 1130 aa3.05□□□□□ -1.92
SNORA28-201ENST00000606769 ITGA6P23229 1130 aa3.05□□□□□ -1.92
SNORA28-201ENST00000606769 INPP5BP32019 993 aa3.05□□□□□ -1.92
SNORA28-201ENST00000606769 EIF1AXP47813 144 aaKnown RBP3.05□□□□□ -1.92
SNORA28-201ENST00000606769 VEGFBP49765 207 aa3.05□□□□□ -1.92
SNORA28-201ENST00000606769 FKBP4Q02790 459 aaKnown RBP eCLIP3.05□□□□□ -1.92
SNORA28-201ENST00000606769 TYRO3Q06418 890 aa3.05□□□□□ -1.92
SNORA28-201ENST00000606769 C11orf91Q3C1V1 193 aa3.05□□□□□ -1.92
SNORA28-201ENST00000606769 LCE2AQ5TA79 106 aaPredicted RBP3.05□□□□□ -1.92
SNORA28-201ENST00000606769 B4GALNT3Q6L9W6 998 aa3.05□□□□□ -1.92
SNORA28-201ENST00000606769 DNAJC14Q6Y2X3 702 aaPredicted RBP3.05□□□□□ -1.92
SNORA28-201ENST00000606769 LRRC69Q6ZNQ3 347 aa3.05□□□□□ -1.92
SNORA28-201ENST00000606769 SND1Q7KZF4 910 aaKnown RBP eCLIP3.05□□□□□ -1.92
SNORA28-201ENST00000606769 RHPN1Q8TCX5 695 aa3.05□□□□□ -1.92
SNORA28-201ENST00000606769 AIDAQ96BJ3 306 aa3.05□□□□□ -1.92
SNORA28-201ENST00000606769 IFT43Q96FT9 208 aa3.05□□□□□ -1.92
SNORA28-201ENST00000606769 ZCCHC2Q9C0B9 1178 aaKnown RBP3.05□□□□□ -1.92
SNORA28-201ENST00000606769 TUT1Q9H6E5 874 aaKnown RBP3.05□□□□□ -1.92
SNORA28-201ENST00000606769 CCDC87Q9NVE4 849 aa3.05□□□□□ -1.92
SNORA28-201ENST00000606769 STIM2Q9P246 746 aa3.05□□□□□ -1.92
SNORA28-201ENST00000606769 USP20Q9Y2K6 914 aa3.05□□□□□ -1.92
SNORA28-201ENST00000606769 ERBB4Q15303 1308 aa3.04□□□□□ -1.92
SNORA28-201ENST00000606769 TGFBR3LH3BV60 316 aa3.04□□□□□ -1.92
SNORA28-201ENST00000606769 C2CD2LO14523 706 aa3.04□□□□□ -1.92
SNORA28-201ENST00000606769 BNIP3LO60238 219 aa3.04□□□□□ -1.92
SNORA28-201ENST00000606769 MICAL2O94851 1124 aa3.04□□□□□ -1.92
SNORA28-201ENST00000606769 KRT76Q01546 638 aa3.04□□□□□ -1.92
SNORA28-201ENST00000606769 SF3B2Q13435 895 aaKnown RBP3.04□□□□□ -1.92
SNORA28-201ENST00000606769 GAS6Q14393 721 aa3.04□□□□□ -1.92
SNORA28-201ENST00000606769 TRIP4Q15650 581 aaPredicted RBP3.04□□□□□ -1.92
SNORA28-201ENST00000606769 NBPF1Q3BBV0 1214 aa3.04□□□□□ -1.92
SNORA28-201ENST00000606769 SAMD5Q5TGI4 173 aa3.04□□□□□ -1.92
SNORA28-201ENST00000606769 IER5Q5VY09 327 aa3.04□□□□□ -1.92
SNORA28-201ENST00000606769 BTLAQ7Z6A9 289 aa3.04□□□□□ -1.92
SNORA28-201ENST00000606769 TREML1Q86YW5 311 aa3.04□□□□□ -1.92
SNORA28-201ENST00000606769 TRIM22Q8IYM9 498 aa3.04□□□□□ -1.92
SNORA28-201ENST00000606769 CCER1Q8TC90 406 aaPredicted RBP3.04□□□□□ -1.92
SNORA28-201ENST00000606769 NANOS1Q8WY41 292 aaKnown RBP3.04□□□□□ -1.92
SNORA28-201ENST00000606769 GAS2L1Q99501 681 aaPredicted RBP3.04□□□□□ -1.92
SNORA28-201ENST00000606769 GPC6Q9Y625 555 aaPredicted RBP3.04□□□□□ -1.92
SNORA28-201ENST00000606769 KCNMB2Q9Y691 235 aa3.04□□□□□ -1.92
SNORA28-201ENST00000606769 A6NHS1 94 aa3.03□□□□□ -1.92
SNORA28-201ENST00000606769 H3BM21 787 aa3.03□□□□□ -1.92
SNORA28-201ENST00000606769 GPR25O00155 361 aa3.03□□□□□ -1.92
SNORA28-201ENST00000606769 VSIG8P0DPA2 414 aa3.03□□□□□ -1.92
SNORA28-201ENST00000606769 BRD2P25440 801 aaKnown RBP3.03□□□□□ -1.92
SNORA28-201ENST00000606769 ZAP70P43403 619 aa3.03□□□□□ -1.92
SNORA28-201ENST00000606769 TNP2Q05952 138 aa3.03□□□□□ -1.92
SNORA28-201ENST00000606769 SFSWAPQ12872 951 aaKnown RBP3.03□□□□□ -1.92
SNORA28-201ENST00000606769 NFX1Q12986 1120 aaKnown RBP3.03□□□□□ -1.92
SNORA28-201ENST00000606769 NLRP8Q86W28 1048 aa3.03□□□□□ -1.92
SNORA28-201ENST00000606769 VTI1AQ96AJ9 217 aa3.03□□□□□ -1.92
SNORA28-201ENST00000606769 NUCKS1Q9H1E3 243 aaKnown RBP3.03□□□□□ -1.92
SNORA28-201ENST00000606769 GGNBP2Q9H3C7 697 aa3.03□□□□□ -1.92
SNORA28-201ENST00000606769 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.03□□□□□ -1.92
SNORA28-201ENST00000606769 GPR182O15218 404 aa3.02□□□□□ -1.93
SNORA28-201ENST00000606769 PDGFAP04085 211 aa3.02□□□□□ -1.93
SNORA28-201ENST00000606769 FAM157BP0CG42 384 aa3.02□□□□□ -1.93
SNORA28-201ENST00000606769 MAPTP10636 758 aaKnown RBP3.02□□□□□ -1.93
SNORA28-201ENST00000606769 TATP17735 454 aaPredicted RBP3.02□□□□□ -1.93
SNORA28-201ENST00000606769 GTF2E1P29083 439 aaPredicted RBP3.02□□□□□ -1.93
SNORA28-201ENST00000606769 IDH3AP50213 366 aa3.02□□□□□ -1.93
SNORA28-201ENST00000606769 KCNQ4P56696 695 aa3.02□□□□□ -1.93
SNORA28-201ENST00000606769 CTBSQ01459 385 aa3.02□□□□□ -1.93
SNORA28-201ENST00000606769 ARSJQ5FYB0 599 aaPredicted RBP3.02□□□□□ -1.93
SNORA28-201ENST00000606769 RNFT1Q5M7Z0 435 aa3.02□□□□□ -1.93
SNORA28-201ENST00000606769 ZNF787Q6DD87 383 aa3.02□□□□□ -1.93
SNORA28-201ENST00000606769 BICDL1Q6ZP65 573 aa3.02□□□□□ -1.93
SNORA28-201ENST00000606769 RIPOR1Q6ZS17 1223 aa3.02□□□□□ -1.93
SNORA28-201ENST00000606769 GLYCTKQ8IVS8 523 aa3.02□□□□□ -1.93
SNORA28-201ENST00000606769 GJD3Q8N144 294 aa3.02□□□□□ -1.93
SNORA28-201ENST00000606769 VWA5B2Q8N398 1253 aa3.02□□□□□ -1.93
SNORA28-201ENST00000606769 RGS22Q8NE09 1264 aa3.02□□□□□ -1.93
SNORA28-201ENST00000606769 GTPBP3Q969Y2 492 aaKnown RBP3.02□□□□□ -1.93
SNORA28-201ENST00000606769 ABHD17AQ96GS6 310 aa3.02□□□□□ -1.93
SNORA28-201ENST00000606769 FAM129BQ96TA1 746 aa3.02□□□□□ -1.93
SNORA28-201ENST00000606769 SLC30A3Q99726 388 aa3.02□□□□□ -1.93
SNORA28-201ENST00000606769 MDFIQ99750 246 aa3.02□□□□□ -1.93
SNORA28-201ENST00000606769 NXF1Q9UBU9 619 aaKnown RBP3.02□□□□□ -1.93
SNORA28-201ENST00000606769 KLF15Q9UIH9 416 aa3.02□□□□□ -1.93
SNORA28-201ENST00000606769 CHMP3Q9Y3E7 222 aa3.02□□□□□ -1.93
SNORA28-201ENST00000606769 ZBTB7CA1YPR0 619 aa3.01□□□□□ -1.93
SNORA28-201ENST00000606769 DCDC2BA2VCK2 349 aa3.01□□□□□ -1.93
SNORA28-201ENST00000606769 TERTO14746 1132 aaKnown RBP3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms