RNA–Protein interactions for RNA: ENST00000606299.1

CSNK1A1-209, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 3 BASIC

Gene CSNK1A1, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-209ENST00000606299 PLEKHG1Q9ULL1 1385 aa13.34□□□□□ -0.27
CSNK1A1-209ENST00000606299 TRMT44Q8IYL2 757 aaKnown RBP13.34□□□□□ -0.27
CSNK1A1-209ENST00000606299 POGKQ9P215 609 aa13.34□□□□□ -0.27
CSNK1A1-209ENST00000606299 FKBPLQ9UIM3 349 aa13.34□□□□□ -0.27
CSNK1A1-209ENST00000606299 MAP4K5Q9Y4K4 846 aa13.34□□□□□ -0.27
CSNK1A1-209ENST00000606299 EVC2Q86UK5 1308 aa13.34□□□□□ -0.27
CSNK1A1-209ENST00000606299 ANKRD26Q9UPS8 1709 aa13.33□□□□□ -0.27
CSNK1A1-209ENST00000606299 NR5A1Q13285 461 aa13.33□□□□□ -0.28
CSNK1A1-209ENST00000606299 TXNDC2Q86VQ3 553 aa13.33□□□□□ -0.28
CSNK1A1-209ENST00000606299 PRAM1Q96QH2 718 aa13.33□□□□□ -0.28
CSNK1A1-209ENST00000606299 MRS2Q9HD23 443 aa13.33□□□□□ -0.28
CSNK1A1-209ENST00000606299 EID1Q9Y6B2 187 aa13.33□□□□□ -0.28
CSNK1A1-209ENST00000606299 METP08581 1390 aa13.32□□□□□ -0.28
CSNK1A1-209ENST00000606299 CHD2O14647 1828 aaKnown RBP13.32□□□□□ -0.28
CSNK1A1-209ENST00000606299 USP32Q8NFA0 1604 aa13.32□□□□□ -0.28
CSNK1A1-209ENST00000606299 ADAMTS13Q76LX8 1427 aa13.32□□□□□ -0.28
CSNK1A1-209ENST00000606299 RFC5P40937 340 aa13.32□□□□□ -0.28
CSNK1A1-209ENST00000606299 CCDC184Q52MB2 194 aa13.32□□□□□ -0.28
CSNK1A1-209ENST00000606299 PDXDC2PQ6P474 469 aa13.32□□□□□ -0.28
CSNK1A1-209ENST00000606299 RGPD8O14715 1765 aaPredicted RBP13.32□□□□□ -0.28
CSNK1A1-209ENST00000606299 USP17L8P0C7I0 530 aa13.31□□□□□ -0.28
CSNK1A1-209ENST00000606299 LTKP29376 864 aa13.31□□□□□ -0.28
CSNK1A1-209ENST00000606299 ARID5BQ14865 1188 aa13.31□□□□□ -0.28
CSNK1A1-209ENST00000606299 RALBP1Q15311 655 aa13.31□□□□□ -0.28
CSNK1A1-209ENST00000606299 CC2D1BQ5T0F9 858 aaKnown RBP13.31□□□□□ -0.28
CSNK1A1-209ENST00000606299 THEMISQ8N1K5 641 aaPredicted RBP13.31□□□□□ -0.28
CSNK1A1-209ENST00000606299 PNMA1Q8ND90 353 aa13.31□□□□□ -0.28
CSNK1A1-209ENST00000606299 AKAP12Q02952 1782 aa13.3□□□□□ -0.28
CSNK1A1-209ENST00000606299 MAGEB6P1A0A0J9YX57 407 aa13.3□□□□□ -0.28
CSNK1A1-209ENST00000606299 IL27Q8NEV9 243 aa13.3□□□□□ -0.28
CSNK1A1-209ENST00000606299 MYBBP1AQ9BQG0 1328 aaKnown RBP13.3□□□□□ -0.28
CSNK1A1-209ENST00000606299 PARD3Q8TEW0 1356 aa13.3□□□□□ -0.28
CSNK1A1-209ENST00000606299 XRN1Q8IZH2 1706 aaKnown RBP13.3□□□□□ -0.28
CSNK1A1-209ENST00000606299 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.3□□□□□ -0.28
CSNK1A1-209ENST00000606299 NR6A1Q15406 480 aa13.29□□□□□ -0.28
CSNK1A1-209ENST00000606299 TMC1Q8TDI8 760 aa13.29□□□□□ -0.28
CSNK1A1-209ENST00000606299 KNSTRNQ9Y448 316 aa13.29□□□□□ -0.28
CSNK1A1-209ENST00000606299 ABCC11Q96J66 1382 aa13.29□□□□□ -0.28
CSNK1A1-209ENST00000606299 PLEKHH1Q9ULM0 1364 aa13.29□□□□□ -0.28
CSNK1A1-209ENST00000606299 TIMP2P16035 220 aa13.28□□□□□ -0.28
CSNK1A1-209ENST00000606299 WDR4P57081 412 aaKnown RBP13.28□□□□□ -0.28
CSNK1A1-209ENST00000606299 TMEM259Q4ZIN3 620 aa13.28□□□□□ -0.28
CSNK1A1-209ENST00000606299 GPSM3Q9Y4H4 160 aa13.28□□□□□ -0.28
CSNK1A1-209ENST00000606299 TECPR2O15040 1411 aa13.28□□□□□ -0.28
CSNK1A1-209ENST00000606299 MED14O60244 1454 aa13.28□□□□□ -0.28
CSNK1A1-209ENST00000606299 GRM5P41594 1212 aa13.27□□□□□ -0.29
CSNK1A1-209ENST00000606299 SRPK2P78362 688 aaKnown RBP13.27□□□□□ -0.29
CSNK1A1-209ENST00000606299 WAPLQ7Z5K2 1190 aa13.27□□□□□ -0.29
CSNK1A1-209ENST00000606299 ARHGAP9Q9BRR9 750 aa13.27□□□□□ -0.29
CSNK1A1-209ENST00000606299 KLF16Q9BXK1 252 aaPredicted RBP13.27□□□□□ -0.29
CSNK1A1-209ENST00000606299 ADGRB2O60241 1585 aa13.26□□□□□ -0.29
CSNK1A1-209ENST00000606299 BMP1P13497 986 aa13.26□□□□□ -0.29
CSNK1A1-209ENST00000606299 ERFEQ4G0M1 354 aa13.26□□□□□ -0.29
CSNK1A1-209ENST00000606299 MON2Q7Z3U7 1717 aa13.26□□□□□ -0.29
CSNK1A1-209ENST00000606299 TRIM46Q7Z4K8 759 aa13.26□□□□□ -0.29
CSNK1A1-209ENST00000606299 FAM9BQ8IZU0 186 aa13.26□□□□□ -0.29
CSNK1A1-209ENST00000606299 CARD14Q9BXL6 1004 aa13.26□□□□□ -0.29
CSNK1A1-209ENST00000606299 NSD3Q9BZ95 1437 aa13.26□□□□□ -0.29
CSNK1A1-209ENST00000606299 TOPAZ1Q8N9V7 1692 aa13.25□□□□□ -0.29
CSNK1A1-209ENST00000606299 FAM135BQ49AJ0 1406 aa13.25□□□□□ -0.29
CSNK1A1-209ENST00000606299 BRD4O60885 1362 aaPredicted RBP13.25□□□□□ -0.29
CSNK1A1-209ENST00000606299 NR3C2P08235 984 aa13.25□□□□□ -0.29
CSNK1A1-209ENST00000606299 SNRPBP14678 240 aaKnown RBP13.25□□□□□ -0.29
CSNK1A1-209ENST00000606299 FSHRP23945 695 aa13.25□□□□□ -0.29
CSNK1A1-209ENST00000606299 VASH1Q7L8A9 365 aaPredicted RBP13.25□□□□□ -0.29
CSNK1A1-209ENST00000606299 PUS7Q96PZ0 661 aaKnown RBP13.25□□□□□ -0.29
CSNK1A1-209ENST00000606299 SLC26A8Q96RN1 970 aa13.25□□□□□ -0.29
CSNK1A1-209ENST00000606299 SLC12A5Q9H2X9 1139 aa13.25□□□□□ -0.29
CSNK1A1-209ENST00000606299 CDV3Q9UKY7 258 aaKnown RBP13.25□□□□□ -0.29
CSNK1A1-209ENST00000606299 PTPRUQ92729 1446 aa13.24□□□□□ -0.29
CSNK1A1-209ENST00000606299 ATAD2Q6PL18 1390 aa13.24□□□□□ -0.29
CSNK1A1-209ENST00000606299 PTK2Q05397 1052 aa13.24□□□□□ -0.29
CSNK1A1-209ENST00000606299 HMX1Q9NP08 348 aaPredicted RBP13.24□□□□□ -0.29
CSNK1A1-209ENST00000606299 NINLQ9Y2I6 1382 aa13.23□□□□□ -0.29
CSNK1A1-209ENST00000606299 SLC10A4Q96EP9 437 aa13.23□□□□□ -0.29
CSNK1A1-209ENST00000606299 CDK19Q9BWU1 502 aa13.23□□□□□ -0.29
CSNK1A1-209ENST00000606299 MAP2P11137 1827 aaKnown RBP13.23□□□□□ -0.29
CSNK1A1-209ENST00000606299 NALCNQ8IZF0 1738 aa13.22□□□□□ -0.29
CSNK1A1-209ENST00000606299 ANKRD36BQ8N2N9 1353 aa13.22□□□□□ -0.29
CSNK1A1-209ENST00000606299 ROBO2Q9HCK4 1378 aa13.22□□□□□ -0.29
CSNK1A1-209ENST00000606299 NPC1L1Q9UHC9 1359 aa13.22□□□□□ -0.29
CSNK1A1-209ENST00000606299 HNRNPUQ00839 825 aaKnown RBP eCLIP13.22□□□□□ -0.29
CSNK1A1-209ENST00000606299 NLRP13Q86W25 1043 aa13.22□□□□□ -0.29
CSNK1A1-209ENST00000606299 ZIC2O95409 532 aaPredicted RBP13.21□□□□□ -0.29
CSNK1A1-209ENST00000606299 MRPL14Q6P1L8 145 aaKnown RBP13.21□□□□□ -0.29
CSNK1A1-209ENST00000606299 SIRT1Q96EB6 747 aa13.21□□□□□ -0.29
CSNK1A1-209ENST00000606299 TBX22Q9Y458 520 aa13.21□□□□□ -0.29
CSNK1A1-209ENST00000606299 FMN2Q9NZ56 1722 aa13.21□□□□□ -0.3
CSNK1A1-209ENST00000606299 ZBTB33Q86T24 672 aa13.2□□□□□ -0.3
CSNK1A1-209ENST00000606299 ANKLE2Q86XL3 938 aa13.2□□□□□ -0.3
CSNK1A1-209ENST00000606299 ITPKCQ96DU7 683 aa13.2□□□□□ -0.3
CSNK1A1-209ENST00000606299 CDC42BPGQ6DT37 1551 aa13.2□□□□□ -0.3
CSNK1A1-209ENST00000606299 SCARF1Q14162 830 aa13.19□□□□□ -0.3
CSNK1A1-209ENST00000606299 EPS8L1Q8TE68 723 aa13.19□□□□□ -0.3
CSNK1A1-209ENST00000606299 PTCH1Q13635 1447 aa13.19□□□□□ -0.3
CSNK1A1-209ENST00000606299 A0A1W2PP64 1363 aa13.19□□□□□ -0.3
CSNK1A1-209ENST00000606299 ATP7BP35670 1465 aa13.18□□□□□ -0.3
CSNK1A1-209ENST00000606299 CD163L1Q9NR16 1453 aa13.18□□□□□ -0.3
CSNK1A1-209ENST00000606299 TREML4Q6UXN2 200 aa13.18□□□□□ -0.3
CSNK1A1-209ENST00000606299 CCDC116Q8IYX3 515 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms