RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 ADCY9O60503 1353 aa18.39■□□□□ 0.53
CTSA-211ENST00000606066 EXOSC9Q06265 439 aaKnown RBP18.38■□□□□ 0.53
CTSA-211ENST00000606066 PDIA6Q15084 440 aa18.38■□□□□ 0.53
CTSA-211ENST00000606066 TSPYL6Q8N831 410 aa18.38■□□□□ 0.53
CTSA-211ENST00000606066 LAMB4A4D0S4 1761 aa18.37■□□□□ 0.53
CTSA-211ENST00000606066 RGL2O15211 777 aa18.37■□□□□ 0.53
CTSA-211ENST00000606066 KIF6Q6ZMV9 814 aa18.37■□□□□ 0.53
CTSA-211ENST00000606066 HYPKQ9NX55 129 aa18.37■□□□□ 0.53
CTSA-211ENST00000606066 CHPF2Q9P2E5 772 aa18.37■□□□□ 0.53
CTSA-211ENST00000606066 ZNF652Q9Y2D9 606 aa18.37■□□□□ 0.53
CTSA-211ENST00000606066 FKBP8Q14318 412 aa18.36■□□□□ 0.53
CTSA-211ENST00000606066 STK31Q9BXU1 1019 aa18.36■□□□□ 0.53
CTSA-211ENST00000606066 CAMTA2O94983 1202 aa18.35■□□□□ 0.53
CTSA-211ENST00000606066 HSPA6P17066 643 aa18.35■□□□□ 0.53
CTSA-211ENST00000606066 CLEC4GQ6UXB4 293 aa18.35■□□□□ 0.53
CTSA-211ENST00000606066 CDCA7LQ96GN5 454 aa18.35■□□□□ 0.53
CTSA-211ENST00000606066 ERVV-1B6SEH8 477 aa18.34■□□□□ 0.53
CTSA-211ENST00000606066 VAMP4O75379 141 aa18.34■□□□□ 0.53
CTSA-211ENST00000606066 ANXA1P04083 346 aa18.34■□□□□ 0.53
CTSA-211ENST00000606066 MMP10P09238 476 aa18.34■□□□□ 0.53
CTSA-211ENST00000606066 PROSER3Q2NL68 480 aa18.34■□□□□ 0.53
CTSA-211ENST00000606066 LRP10Q7Z4F1 713 aa18.34■□□□□ 0.53
CTSA-211ENST00000606066 BCL2L12Q9HB09 334 aa18.34■□□□□ 0.53
CTSA-211ENST00000606066 PARP3Q9Y6F1 533 aa18.34■□□□□ 0.53
CTSA-211ENST00000606066 ZBED9Q6R2W3 1325 aa18.33■□□□□ 0.53
CTSA-211ENST00000606066 MAP3K15Q6ZN16 1313 aa18.33■□□□□ 0.53
CTSA-211ENST00000606066 TGFB2P61812 414 aa18.33■□□□□ 0.52
CTSA-211ENST00000606066 COPS6Q7L5N1 327 aa18.33■□□□□ 0.52
CTSA-211ENST00000606066 TRMT2AQ8IZ69 625 aaKnown RBP18.33■□□□□ 0.52
CTSA-211ENST00000606066 TM4SF1P30408 202 aa18.32■□□□□ 0.52
CTSA-211ENST00000606066 AIMP1Q12904 312 aaKnown RBP18.32■□□□□ 0.52
CTSA-211ENST00000606066 TTLL7Q6ZT98 887 aa18.32■□□□□ 0.52
CTSA-211ENST00000606066 XAGE3Q8WTP9 111 aa18.32■□□□□ 0.52
CTSA-211ENST00000606066 NFIXQ14938 502 aa18.31■□□□□ 0.52
CTSA-211ENST00000606066 SETDB2Q96T68 719 aa18.31■□□□□ 0.52
CTSA-211ENST00000606066 C4AP0C0L4 1744 aa18.3■□□□□ 0.52
CTSA-211ENST00000606066 KIF3CO14782 793 aa18.3■□□□□ 0.52
CTSA-211ENST00000606066 SLC4A2P04920 1241 aa18.3■□□□□ 0.52
CTSA-211ENST00000606066 ZNF428Q96B54 188 aa18.3■□□□□ 0.52
CTSA-211ENST00000606066 ZBTB3Q9H5J0 574 aa18.3■□□□□ 0.52
CTSA-211ENST00000606066 DDX58O95786 925 aaKnown RBP18.29■□□□□ 0.52
CTSA-211ENST00000606066 CT47B1P0C2W7 299 aaPredicted RBP18.29■□□□□ 0.52
CTSA-211ENST00000606066 TBC1D9BQ66K14 1250 aa18.29■□□□□ 0.52
CTSA-211ENST00000606066 BICDL1Q6ZP65 573 aa18.29■□□□□ 0.52
CTSA-211ENST00000606066 ANKRD13DQ6ZTN6 518 aa18.29■□□□□ 0.52
CTSA-211ENST00000606066 ZNF526Q8TF50 670 aaPredicted RBP18.29■□□□□ 0.52
CTSA-211ENST00000606066 POLRMTO00411 1230 aaKnown RBP18.28■□□□□ 0.52
CTSA-211ENST00000606066 TCERG1O14776 1098 aaKnown RBP18.28■□□□□ 0.52
CTSA-211ENST00000606066 HLFQ16534 295 aa18.28■□□□□ 0.52
CTSA-211ENST00000606066 HSP90AB3PQ58FF7 597 aa18.28■□□□□ 0.52
CTSA-211ENST00000606066 GIGYF2Q6Y7W6 1299 aaKnown RBP18.28■□□□□ 0.52
CTSA-211ENST00000606066 PLBD2Q8NHP8 589 aa18.28■□□□□ 0.52
CTSA-211ENST00000606066 DDR1Q08345 913 aa18.27■□□□□ 0.52
CTSA-211ENST00000606066 PHAXQ9H814 394 aaKnown RBP18.27■□□□□ 0.52
CTSA-211ENST00000606066 NIP7Q9Y221 180 aaKnown RBP eCLIP18.27■□□□□ 0.52
CTSA-211ENST00000606066 CARMIL3Q8ND23 1372 aa18.27■□□□□ 0.51
CTSA-211ENST00000606066 SERPINB2P05120 415 aa18.26■□□□□ 0.51
CTSA-211ENST00000606066 RIC3Q7Z5B4 369 aa18.26■□□□□ 0.51
CTSA-211ENST00000606066 WWC3Q9ULE0 1092 aa18.26■□□□□ 0.51
CTSA-211ENST00000606066 NPHP1O15259 732 aa18.25■□□□□ 0.51
CTSA-211ENST00000606066 SCN7AQ01118 1682 aa18.25■□□□□ 0.51
CTSA-211ENST00000606066 A0A0G2JLW4 131 aa18.24■□□□□ 0.51
CTSA-211ENST00000606066 TOMM70O94826 608 aa18.23■□□□□ 0.51
CTSA-211ENST00000606066 FLIIQ13045 1269 aa18.23■□□□□ 0.51
CTSA-211ENST00000606066 TCIRG1Q13488 830 aa18.23■□□□□ 0.51
CTSA-211ENST00000606066 ALDH1L2Q3SY69 923 aa18.23■□□□□ 0.51
CTSA-211ENST00000606066 PARP10Q53GL7 1025 aa18.23■□□□□ 0.51
CTSA-211ENST00000606066 TPTE2Q6XPS3 522 aa18.23■□□□□ 0.51
CTSA-211ENST00000606066 NBPF5PQ86XG9 351 aaPredicted RBP18.23■□□□□ 0.51
CTSA-211ENST00000606066 ZNF34Q8IZ26 560 aa18.23■□□□□ 0.51
CTSA-211ENST00000606066 NYXQ9GZU5 481 aa18.23■□□□□ 0.51
CTSA-211ENST00000606066 BCS1LQ9Y276 419 aa18.23■□□□□ 0.51
CTSA-211ENST00000606066 KSR2Q6VAB6 950 aa18.22■□□□□ 0.51
CTSA-211ENST00000606066 CNBD1Q8NA66 436 aa18.22■□□□□ 0.51
CTSA-211ENST00000606066 PXDNLA1KZ92 1463 aa18.21■□□□□ 0.51
CTSA-211ENST00000606066 DPEP1P16444 411 aa18.21■□□□□ 0.51
CTSA-211ENST00000606066 KCNA3P22001 575 aa18.21■□□□□ 0.51
CTSA-211ENST00000606066 GPTP24298 496 aa18.21■□□□□ 0.51
CTSA-211ENST00000606066 GTF2E1P29083 439 aaPredicted RBP18.21■□□□□ 0.51
CTSA-211ENST00000606066 APLP1P51693 650 aa18.21■□□□□ 0.51
CTSA-211ENST00000606066 ST5P78524 1137 aa18.21■□□□□ 0.51
CTSA-211ENST00000606066 FKBP5Q13451 457 aaPredicted RBP18.21■□□□□ 0.51
CTSA-211ENST00000606066 ARHGAP27Q6ZUM4 889 aa18.21■□□□□ 0.51
CTSA-211ENST00000606066 G2E3Q7L622 706 aa18.21■□□□□ 0.51
CTSA-211ENST00000606066 PPP1R42Q7Z4L9 355 aa18.21■□□□□ 0.51
CTSA-211ENST00000606066 BCORQ6W2J9 1755 aa18.21■□□□□ 0.51
CTSA-211ENST00000606066 PI4KAP2A4QPH2 592 aa18.2■□□□□ 0.5
CTSA-211ENST00000606066 PI4KAP1Q8N8J0 262 aa18.2■□□□□ 0.5
CTSA-211ENST00000606066 FAM177BA6PVY3 158 aa18.19■□□□□ 0.5
CTSA-211ENST00000606066 NEXNQ0ZGT2 675 aa18.19■□□□□ 0.5
CTSA-211ENST00000606066 PRR5LQ6MZQ0 368 aa18.19■□□□□ 0.5
CTSA-211ENST00000606066 C10orf71Q711Q0 1435 aa18.19■□□□□ 0.5
CTSA-211ENST00000606066 MRPL50Q8N5N7 158 aaKnown RBP18.19■□□□□ 0.5
CTSA-211ENST00000606066 DNAJC5GQ8N7S2 189 aa18.19■□□□□ 0.5
CTSA-211ENST00000606066 SSH1Q8WYL5 1049 aa18.19■□□□□ 0.5
CTSA-211ENST00000606066 METTL22Q9BUU2 404 aaPredicted RBP18.19■□□□□ 0.5
CTSA-211ENST00000606066 MAP3K2Q9Y2U5 619 aa18.19■□□□□ 0.5
CTSA-211ENST00000606066 TRIM28Q13263 835 aaKnown RBP18.18■□□□□ 0.5
CTSA-211ENST00000606066 SUSD4Q5VX71 490 aa18.18■□□□□ 0.5
CTSA-211ENST00000606066 NLRP10Q86W26 655 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 311.4 ms