RNA–Protein interactions for RNA: ENST00000605457.5

TUBE1-211, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,645 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-211ENST00000605457 ELL2O00472 640 aaPredicted RBP18.41■□□□□ 0.54
TUBE1-211ENST00000605457 RGL2O15211 777 aa18.41■□□□□ 0.54
TUBE1-211ENST00000605457 ANXA1P04083 346 aa18.41■□□□□ 0.54
TUBE1-211ENST00000605457 BRCA1P38398 1863 aaKnown RBP18.41■□□□□ 0.54
TUBE1-211ENST00000605457 DDX21Q9NR30 783 aaKnown RBP eCLIP18.41■□□□□ 0.54
TUBE1-211ENST00000605457 CHPF2Q9P2E5 772 aa18.41■□□□□ 0.54
TUBE1-211ENST00000605457 TBC1D9BQ66K14 1250 aa18.4■□□□□ 0.54
TUBE1-211ENST00000605457 CLEC4GQ6UXB4 293 aa18.4■□□□□ 0.54
TUBE1-211ENST00000605457 TTLL7Q6ZT98 887 aa18.4■□□□□ 0.54
TUBE1-211ENST00000605457 TSPYL6Q8N831 410 aa18.4■□□□□ 0.54
TUBE1-211ENST00000605457 CD2APQ9Y5K6 639 aa18.4■□□□□ 0.54
TUBE1-211ENST00000605457 ANKRD31Q8N7Z5 1873 aa18.4■□□□□ 0.54
TUBE1-211ENST00000605457 NLGN2Q8NFZ4 835 aa18.39■□□□□ 0.53
TUBE1-211ENST00000605457 ARFGEF2Q9Y6D5 1785 aa18.39■□□□□ 0.53
TUBE1-211ENST00000605457 CARMIL3Q8ND23 1372 aa18.39■□□□□ 0.53
TUBE1-211ENST00000605457 MAP3K15Q6ZN16 1313 aa18.38■□□□□ 0.53
TUBE1-211ENST00000605457 KIF6Q6ZMV9 814 aa18.38■□□□□ 0.53
TUBE1-211ENST00000605457 DBF4Q9UBU7 674 aaPredicted RBP18.38■□□□□ 0.53
TUBE1-211ENST00000605457 ZNF652Q9Y2D9 606 aa18.38■□□□□ 0.53
TUBE1-211ENST00000605457 ERVV-1B6SEH8 477 aa18.38■□□□□ 0.53
TUBE1-211ENST00000605457 BICDL1Q6ZP65 573 aa18.38■□□□□ 0.53
TUBE1-211ENST00000605457 MYH16Q9H6N6 1097 aa18.38■□□□□ 0.53
TUBE1-211ENST00000605457 DLEC1Q9Y238 1755 aa18.37■□□□□ 0.53
TUBE1-211ENST00000605457 GOLGA2Q08379 1002 aa18.37■□□□□ 0.53
TUBE1-211ENST00000605457 HLFQ16534 295 aa18.37■□□□□ 0.53
TUBE1-211ENST00000605457 ATP10DQ9P241 1426 aa18.37■□□□□ 0.53
TUBE1-211ENST00000605457 TWISTNBQ3B726 338 aaPredicted RBP18.36■□□□□ 0.53
TUBE1-211ENST00000605457 PXDNLA1KZ92 1463 aa18.36■□□□□ 0.53
TUBE1-211ENST00000605457 SERPINB2P05120 415 aa18.35■□□□□ 0.53
TUBE1-211ENST00000605457 COPS6Q7L5N1 327 aa18.35■□□□□ 0.53
TUBE1-211ENST00000605457 XAGE3Q8WTP9 111 aa18.35■□□□□ 0.53
TUBE1-211ENST00000605457 ZBTB3Q9H5J0 574 aa18.35■□□□□ 0.53
TUBE1-211ENST00000605457 EXOSC9Q06265 439 aaKnown RBP18.34■□□□□ 0.53
TUBE1-211ENST00000605457 SETDB2Q96T68 719 aa18.34■□□□□ 0.53
TUBE1-211ENST00000605457 CHMP4AQ9BY43 222 aa18.34■□□□□ 0.53
TUBE1-211ENST00000605457 HYPKQ9NX55 129 aa18.34■□□□□ 0.53
TUBE1-211ENST00000605457 AIMP1Q12904 312 aaKnown RBP18.34■□□□□ 0.53
TUBE1-211ENST00000605457 CCDC30Q5VVM6 783 aa18.34■□□□□ 0.53
TUBE1-211ENST00000605457 COL11A2P13942 1736 aaPredicted RBP18.33■□□□□ 0.53
TUBE1-211ENST00000605457 GIGYF2Q6Y7W6 1299 aaKnown RBP18.33■□□□□ 0.52
TUBE1-211ENST00000605457 NIP7Q9Y221 180 aaKnown RBP eCLIP18.33■□□□□ 0.52
TUBE1-211ENST00000605457 E9PSI1 815 aa18.32■□□□□ 0.52
TUBE1-211ENST00000605457 VAMP4O75379 141 aa18.31■□□□□ 0.52
TUBE1-211ENST00000605457 PRR5LQ6MZQ0 368 aa18.31■□□□□ 0.52
TUBE1-211ENST00000605457 ARFGEF1Q9Y6D6 1849 aa18.31■□□□□ 0.52
TUBE1-211ENST00000605457 TGFB2P61812 414 aa18.31■□□□□ 0.52
TUBE1-211ENST00000605457 SLFN5Q08AF3 891 aa18.31■□□□□ 0.52
TUBE1-211ENST00000605457 PHAXQ9H814 394 aaKnown RBP18.31■□□□□ 0.52
TUBE1-211ENST00000605457 UBN2Q6ZU65 1347 aa18.3■□□□□ 0.52
TUBE1-211ENST00000605457 CHD4Q14839 1912 aa18.3■□□□□ 0.52
TUBE1-211ENST00000605457 CNBD1Q8NA66 436 aa18.3■□□□□ 0.52
TUBE1-211ENST00000605457 CDCA7LQ96GN5 454 aa18.3■□□□□ 0.52
TUBE1-211ENST00000605457 CACNA1SQ13698 1873 aa18.3■□□□□ 0.52
TUBE1-211ENST00000605457 NBPF5PQ86XG9 351 aaPredicted RBP18.29■□□□□ 0.52
TUBE1-211ENST00000605457 ZNF34Q8IZ26 560 aa18.29■□□□□ 0.52
TUBE1-211ENST00000605457 PLBD2Q8NHP8 589 aa18.29■□□□□ 0.52
TUBE1-211ENST00000605457 STK31Q9BXU1 1019 aa18.29■□□□□ 0.52
TUBE1-211ENST00000605457 TNRC6CQ9HCJ0 1690 aaKnown RBP18.29■□□□□ 0.52
TUBE1-211ENST00000605457 IBTKQ9P2D0 1353 aaPredicted RBP18.28■□□□□ 0.52
TUBE1-211ENST00000605457 TCERG1O14776 1098 aaKnown RBP18.28■□□□□ 0.52
TUBE1-211ENST00000605457 GPTP24298 496 aa18.28■□□□□ 0.52
TUBE1-211ENST00000605457 ANKRD13DQ6ZTN6 518 aa18.28■□□□□ 0.52
TUBE1-211ENST00000605457 A0A0G2JLW4 131 aa18.27■□□□□ 0.52
TUBE1-211ENST00000605457 DPEP1P16444 411 aa18.27■□□□□ 0.52
TUBE1-211ENST00000605457 HNRNPUQ00839 825 aaKnown RBP eCLIP18.27■□□□□ 0.52
TUBE1-211ENST00000605457 TRMT2AQ8IZ69 625 aaKnown RBP18.27■□□□□ 0.52
TUBE1-211ENST00000605457 HSP90AB3PQ58FF7 597 aa18.27■□□□□ 0.51
TUBE1-211ENST00000605457 CCDC24Q8N4L8 307 aa18.27■□□□□ 0.51
TUBE1-211ENST00000605457 NPHP1O15259 732 aa18.26■□□□□ 0.51
TUBE1-211ENST00000605457 KCNA3P22001 575 aa18.26■□□□□ 0.51
TUBE1-211ENST00000605457 ST5P78524 1137 aa18.26■□□□□ 0.51
TUBE1-211ENST00000605457 TCIRG1Q13488 830 aa18.26■□□□□ 0.51
TUBE1-211ENST00000605457 TPTE2Q6XPS3 522 aa18.26■□□□□ 0.51
TUBE1-211ENST00000605457 LAMB2P55268 1798 aa18.25■□□□□ 0.51
TUBE1-211ENST00000605457 DCAF8L1A6NGE4 600 aa18.25■□□□□ 0.51
TUBE1-211ENST00000605457 FAM177BA6PVY3 158 aa18.25■□□□□ 0.51
TUBE1-211ENST00000605457 SLC4A2P04920 1241 aa18.25■□□□□ 0.51
TUBE1-211ENST00000605457 YBX3P16989 372 aaKnown RBP eCLIP18.25■□□□□ 0.51
TUBE1-211ENST00000605457 CHRNA5P30532 468 aa18.25■□□□□ 0.51
TUBE1-211ENST00000605457 PARP10Q53GL7 1025 aa18.25■□□□□ 0.51
TUBE1-211ENST00000605457 BRIP1Q9BX63 1249 aa18.25■□□□□ 0.51
TUBE1-211ENST00000605457 NYXQ9GZU5 481 aa18.25■□□□□ 0.51
TUBE1-211ENST00000605457 GPR162Q16538 588 aa18.24■□□□□ 0.51
TUBE1-211ENST00000605457 SUSD4Q5VX71 490 aa18.24■□□□□ 0.51
TUBE1-211ENST00000605457 G2E3Q7L622 706 aa18.24■□□□□ 0.51
TUBE1-211ENST00000605457 PELP1Q8IZL8 1130 aaKnown RBP18.24■□□□□ 0.51
TUBE1-211ENST00000605457 WWC3Q9ULE0 1092 aa18.24■□□□□ 0.51
TUBE1-211ENST00000605457 ABCC12Q96J65 1359 aa18.24■□□□□ 0.51
TUBE1-211ENST00000605457 DDX60Q8IY21 1712 aaKnown RBP18.24■□□□□ 0.51
TUBE1-211ENST00000605457 NTSR2O95665 410 aa18.23■□□□□ 0.51
TUBE1-211ENST00000605457 RIC3Q7Z5B4 369 aa18.23■□□□□ 0.51
TUBE1-211ENST00000605457 NLRP10Q86W26 655 aa18.23■□□□□ 0.51
TUBE1-211ENST00000605457 ADCY9O60503 1353 aa18.23■□□□□ 0.51
TUBE1-211ENST00000605457 RIC1Q4ADV7 1423 aa18.23■□□□□ 0.51
TUBE1-211ENST00000605457 DDX58O95786 925 aaKnown RBP18.23■□□□□ 0.51
TUBE1-211ENST00000605457 PDE6BP35913 854 aa18.23■□□□□ 0.51
TUBE1-211ENST00000605457 NUTM1Q86Y26 1132 aa18.23■□□□□ 0.51
TUBE1-211ENST00000605457 FLIIQ13045 1269 aa18.22■□□□□ 0.51
TUBE1-211ENST00000605457 PPP1R42Q7Z4L9 355 aa18.22■□□□□ 0.51
TUBE1-211ENST00000605457 ISCA1Q9BUE6 129 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms