RNA–Protein interactions for RNA: ENST00000604859.1

NEK4P3-201, Transcript of NIMA-related kinase 4 pseudogene 3, humanhuman

BASIC

Gene NEK4P3, Length 544 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P3-201ENST00000604859 COL11A2P13942 1736 aaPredicted RBP17.18■□□□□ 0.34
NEK4P3-201ENST00000604859 STYK1Q6J9G0 422 aa17.18■□□□□ 0.34
NEK4P3-201ENST00000604859 RTF1Q92541 710 aaKnown RBP17.18■□□□□ 0.34
NEK4P3-201ENST00000604859 SRGNP10124 158 aa17.17■□□□□ 0.34
NEK4P3-201ENST00000604859 CACNA1SQ13698 1873 aa17.17■□□□□ 0.34
NEK4P3-201ENST00000604859 CLEC4GQ6UXB4 293 aa17.17■□□□□ 0.34
NEK4P3-201ENST00000604859 MASTLQ96GX5 879 aa17.17■□□□□ 0.34
NEK4P3-201ENST00000604859 LTBP3Q9NS15 1303 aa17.17■□□□□ 0.34
NEK4P3-201ENST00000604859 SNRPA1P09661 255 aaKnown RBP17.16■□□□□ 0.34
NEK4P3-201ENST00000604859 U2AF1L5P0DN76 240 aaPredicted RBP17.16■□□□□ 0.34
NEK4P3-201ENST00000604859 PIP4K2AP48426 406 aaPredicted RBP17.16■□□□□ 0.34
NEK4P3-201ENST00000604859 U2AF1Q01081 240 aaKnown RBP eCLIP17.16■□□□□ 0.34
NEK4P3-201ENST00000604859 COL13A1Q5TAT6 717 aaPredicted RBP17.16■□□□□ 0.34
NEK4P3-201ENST00000604859 MCM10Q7L590 875 aa17.16■□□□□ 0.34
NEK4P3-201ENST00000604859 TAOK3Q9H2K8 898 aa17.16■□□□□ 0.34
NEK4P3-201ENST00000604859 BCORQ6W2J9 1755 aa17.15■□□□□ 0.34
NEK4P3-201ENST00000604859 PRAMEF22A3QJZ6 481 aa17.15■□□□□ 0.34
NEK4P3-201ENST00000604859 SOGA3Q5TF21 947 aa17.15■□□□□ 0.34
NEK4P3-201ENST00000604859 PRPF40BQ6NWY9 871 aaKnown RBP17.15■□□□□ 0.34
NEK4P3-201ENST00000604859 NBPF5PQ86XG9 351 aaPredicted RBP17.15■□□□□ 0.34
NEK4P3-201ENST00000604859 ZNF652Q9Y2D9 606 aa17.15■□□□□ 0.34
NEK4P3-201ENST00000604859 ARFGEF2Q9Y6D5 1785 aa17.13■□□□□ 0.33
NEK4P3-201ENST00000604859 HTATSF1O43719 755 aaKnown RBP17.13■□□□□ 0.33
NEK4P3-201ENST00000604859 PPP2R1AP30153 589 aa17.13■□□□□ 0.33
NEK4P3-201ENST00000604859 DDNO94850 711 aaPredicted RBP17.12■□□□□ 0.33
NEK4P3-201ENST00000604859 DCTN1Q14203 1278 aa17.12■□□□□ 0.33
NEK4P3-201ENST00000604859 TPTE2Q6XPS3 522 aa17.12■□□□□ 0.33
NEK4P3-201ENST00000604859 C7orf43Q8WVR3 580 aa17.12■□□□□ 0.33
NEK4P3-201ENST00000604859 KLRG2A4D1S0 409 aaPredicted RBP17.11■□□□□ 0.33
NEK4P3-201ENST00000604859 NBPF26B4DH59 902 aa17.11■□□□□ 0.33
NEK4P3-201ENST00000604859 RGL2O15211 777 aa17.11■□□□□ 0.33
NEK4P3-201ENST00000604859 NPR1P16066 1061 aa17.11■□□□□ 0.33
NEK4P3-201ENST00000604859 TAF7Q15545 349 aaPredicted RBP17.11■□□□□ 0.33
NEK4P3-201ENST00000604859 CHADLQ6NUI6 762 aa17.11■□□□□ 0.33
NEK4P3-201ENST00000604859 NBPF10Q6P3W6 841 aaKnown RBP17.11■□□□□ 0.33
NEK4P3-201ENST00000604859 NBPF15Q8N660 670 aa17.11■□□□□ 0.33
NEK4P3-201ENST00000604859 NIP7Q9Y221 180 aaKnown RBP eCLIP17.11■□□□□ 0.33
NEK4P3-201ENST00000604859 CCDC93Q567U6 631 aa17.09■□□□□ 0.33
NEK4P3-201ENST00000604859 POTEIP0CG38 1075 aa17.08■□□□□ 0.32
NEK4P3-201ENST00000604859 POTEJP0CG39 1038 aa17.08■□□□□ 0.32
NEK4P3-201ENST00000604859 HSPA1AP0DMV8 641 aaKnown RBP17.08■□□□□ 0.32
NEK4P3-201ENST00000604859 HSPA1BP0DMV9 641 aaKnown RBP17.08■□□□□ 0.32
NEK4P3-201ENST00000604859 CREBZFQ9NS37 354 aa17.08■□□□□ 0.32
NEK4P3-201ENST00000604859 IQCA1LA6NCM1 817 aa17.07■□□□□ 0.32
NEK4P3-201ENST00000604859 FAM177BA6PVY3 158 aa17.07■□□□□ 0.32
NEK4P3-201ENST00000604859 FKBP4Q02790 459 aaKnown RBP eCLIP17.07■□□□□ 0.32
NEK4P3-201ENST00000604859 HLFQ16534 295 aa17.07■□□□□ 0.32
NEK4P3-201ENST00000604859 TNS4Q8IZW8 715 aa17.07■□□□□ 0.32
NEK4P3-201ENST00000604859 MIS18AQ9NYP9 233 aa17.07■□□□□ 0.32
NEK4P3-201ENST00000604859 SCN4AP35499 1836 aa17.07■□□□□ 0.32
NEK4P3-201ENST00000604859 GTF2E1P29083 439 aaPredicted RBP17.06■□□□□ 0.32
NEK4P3-201ENST00000604859 ALDH1B1P30837 517 aa17.06■□□□□ 0.32
NEK4P3-201ENST00000604859 RTKN2Q8IZC4 609 aa17.06■□□□□ 0.32
NEK4P3-201ENST00000604859 L3MBTL3Q96JM7 780 aaPredicted RBP17.06■□□□□ 0.32
NEK4P3-201ENST00000604859 ZNF277Q9NRM2 450 aaPredicted RBP17.05■□□□□ 0.32
NEK4P3-201ENST00000604859 DLG5Q8TDM6 1919 aa17.04■□□□□ 0.32
NEK4P3-201ENST00000604859 NEFMP07197 916 aa17.04■□□□□ 0.32
NEK4P3-201ENST00000604859 OLFM4Q6UX06 510 aa17.04■□□□□ 0.32
NEK4P3-201ENST00000604859 LDHDQ86WU2 507 aa17.04■□□□□ 0.32
NEK4P3-201ENST00000604859 NGEFQ8N5V2 710 aa17.04■□□□□ 0.32
NEK4P3-201ENST00000604859 PNISRQ8TF01 805 aaKnown RBP17.04■□□□□ 0.32
NEK4P3-201ENST00000604859 TAF1DQ9H5J8 278 aaPredicted RBP17.04■□□□□ 0.32
NEK4P3-201ENST00000604859 NUP98P52948 1817 aa17.03■□□□□ 0.32
NEK4P3-201ENST00000604859 ERVV-1B6SEH8 477 aa17.03■□□□□ 0.32
NEK4P3-201ENST00000604859 NYXQ9GZU5 481 aa17.03■□□□□ 0.32
NEK4P3-201ENST00000604859 MKRN1Q9UHC7 482 aaKnown RBP17.03■□□□□ 0.32
NEK4P3-201ENST00000604859 CAPN15O75808 1086 aa17.02■□□□□ 0.32
NEK4P3-201ENST00000604859 SYNE4Q8N205 404 aa17.02■□□□□ 0.32
NEK4P3-201ENST00000604859 LAMB4A4D0S4 1761 aa17.02■□□□□ 0.31
NEK4P3-201ENST00000604859 PASKQ96RG2 1323 aa17.01■□□□□ 0.31
NEK4P3-201ENST00000604859 ZNF541Q9H0D2 1346 aa17.01■□□□□ 0.31
NEK4P3-201ENST00000604859 FZD9O00144 591 aa17.01■□□□□ 0.31
NEK4P3-201ENST00000604859 IARSP41252 1262 aaKnown RBP17.01■□□□□ 0.31
NEK4P3-201ENST00000604859 CRY2Q49AN0 593 aa17.01■□□□□ 0.31
NEK4P3-201ENST00000604859 EAPPQ56P03 285 aaPredicted RBP17.01■□□□□ 0.31
NEK4P3-201ENST00000604859 HACL1Q9UJ83 578 aa17.01■□□□□ 0.31
NEK4P3-201ENST00000604859 RRP7AQ9Y3A4 280 aaKnown RBP17.01■□□□□ 0.31
NEK4P3-201ENST00000604859 MAP3K15Q6ZN16 1313 aa17■□□□□ 0.31
NEK4P3-201ENST00000604859 ITGBL1O95965 494 aaPredicted RBP17■□□□□ 0.31
NEK4P3-201ENST00000604859 EIF4A1P60842 406 aaKnown RBP17■□□□□ 0.31
NEK4P3-201ENST00000604859 NUTM1Q86Y26 1132 aa17■□□□□ 0.31
NEK4P3-201ENST00000604859 PLEKHF1Q96S99 279 aa17■□□□□ 0.31
NEK4P3-201ENST00000604859 CLEC11AQ9Y240 323 aa17■□□□□ 0.31
NEK4P3-201ENST00000604859 KDM3BQ7LBC6 1761 aa17■□□□□ 0.31
NEK4P3-201ENST00000604859 EPHX2P34913 555 aa16.99■□□□□ 0.31
NEK4P3-201ENST00000604859 KIF6Q6ZMV9 814 aa16.99■□□□□ 0.31
NEK4P3-201ENST00000604859 TTLL7Q6ZT98 887 aa16.99■□□□□ 0.31
NEK4P3-201ENST00000604859 PNMA8AQ86V59 439 aaPredicted RBP16.99■□□□□ 0.31
NEK4P3-201ENST00000604859 PSMD1Q99460 953 aa16.99■□□□□ 0.31
NEK4P3-201ENST00000604859 TMEM88BA6NKF7 163 aa16.98■□□□□ 0.31
NEK4P3-201ENST00000604859 MYL6BP14649 208 aa16.98■□□□□ 0.31
NEK4P3-201ENST00000604859 NFE2L2Q16236 605 aa16.98■□□□□ 0.31
NEK4P3-201ENST00000604859 CC2D2BQ6DHV5 1058 aa16.98■□□□□ 0.31
NEK4P3-201ENST00000604859 GPC2Q8N158 579 aa16.98■□□□□ 0.31
NEK4P3-201ENST00000604859 JDP2Q8WYK2 163 aa16.98■□□□□ 0.31
NEK4P3-201ENST00000604859 PNNQ9H307 717 aaKnown RBP16.98■□□□□ 0.31
NEK4P3-201ENST00000604859 CNTNAP1P78357 1384 aa16.98■□□□□ 0.31
NEK4P3-201ENST00000604859 HOXA10P31260 410 aaPredicted RBP16.97■□□□□ 0.31
NEK4P3-201ENST00000604859 RPGRQ92834 1020 aaKnown RBP16.97■□□□□ 0.31
NEK4P3-201ENST00000604859 ABCC12Q96J65 1359 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms