RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 ST3GAL1Q11201 340 aa14.75□□□□□ -0.05
CDCA3-212ENST00000604599 ADCK5Q3MIX3 580 aa14.75□□□□□ -0.05
CDCA3-212ENST00000604599 KLHL34Q8N239 644 aa14.75□□□□□ -0.05
CDCA3-212ENST00000604599 JAKMIP1Q96N16 626 aaKnown RBP14.75□□□□□ -0.05
CDCA3-212ENST00000604599 TRMT1Q9NXH9 659 aaKnown RBP14.75□□□□□ -0.05
CDCA3-212ENST00000604599 PTPN14Q15678 1187 aa14.75□□□□□ -0.05
CDCA3-212ENST00000604599 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.75□□□□□ -0.05
CDCA3-212ENST00000604599 NECTIN2Q92692 538 aa14.75□□□□□ -0.05
CDCA3-212ENST00000604599 TFIP11Q9UBB9 837 aaKnown RBP14.75□□□□□ -0.05
CDCA3-212ENST00000604599 LARP1BQ659C4 914 aaKnown RBP14.74□□□□□ -0.05
CDCA3-212ENST00000604599 TDRD7Q8NHU6 1098 aaKnown RBP14.74□□□□□ -0.05
CDCA3-212ENST00000604599 PDRG1Q9NUG6 133 aa14.74□□□□□ -0.05
CDCA3-212ENST00000604599 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.74□□□□□ -0.05
CDCA3-212ENST00000604599 WAPLQ7Z5K2 1190 aa14.74□□□□□ -0.05
CDCA3-212ENST00000604599 PREX1Q8TCU6 1659 aa14.74□□□□□ -0.05
CDCA3-212ENST00000604599 EPB41L2O43491 1005 aaKnown RBP14.73□□□□□ -0.05
CDCA3-212ENST00000604599 GNAI3P08754 354 aa14.73□□□□□ -0.05
CDCA3-212ENST00000604599 ME3Q16798 604 aa14.73□□□□□ -0.05
CDCA3-212ENST00000604599 LRRC8AQ8IWT6 810 aa14.73□□□□□ -0.05
CDCA3-212ENST00000604599 COG3Q96JB2 828 aa14.73□□□□□ -0.05
CDCA3-212ENST00000604599 MYO5BQ9ULV0 1848 aa14.73□□□□□ -0.05
CDCA3-212ENST00000604599 CAPN2P17655 700 aa14.73□□□□□ -0.05
CDCA3-212ENST00000604599 ZNF446Q9NWS9 450 aa14.73□□□□□ -0.05
CDCA3-212ENST00000604599 CALCOCO1Q9P1Z2 691 aa14.73□□□□□ -0.05
CDCA3-212ENST00000604599 PRPF40BQ6NWY9 871 aaKnown RBP14.72□□□□□ -0.05
CDCA3-212ENST00000604599 TSPYL4Q9UJ04 414 aa14.72□□□□□ -0.05
CDCA3-212ENST00000604599 CCDC171Q6TFL3 1326 aa14.72□□□□□ -0.05
CDCA3-212ENST00000604599 ATP7BP35670 1465 aa14.72□□□□□ -0.05
CDCA3-212ENST00000604599 SKILP12757 684 aa14.72□□□□□ -0.05
CDCA3-212ENST00000604599 PI4K2BQ8TCG2 481 aa14.72□□□□□ -0.05
CDCA3-212ENST00000604599 GTF3C6Q969F1 213 aa14.72□□□□□ -0.05
CDCA3-212ENST00000604599 ERBB3P21860 1342 aa14.72□□□□□ -0.05
CDCA3-212ENST00000604599 NR1I2O75469 434 aa14.72□□□□□ -0.05
CDCA3-212ENST00000604599 FILIP1Q7Z7B0 1213 aa14.72□□□□□ -0.05
CDCA3-212ENST00000604599 ERO1AQ96HE7 468 aa14.72□□□□□ -0.05
CDCA3-212ENST00000604599 SPATA32Q96LK8 384 aa14.72□□□□□ -0.05
CDCA3-212ENST00000604599 FAM53CQ9NYF3 392 aa14.72□□□□□ -0.05
CDCA3-212ENST00000604599 AOX1Q06278 1338 aa14.71□□□□□ -0.05
CDCA3-212ENST00000604599 NYAP1Q6ZVC0 841 aa14.71□□□□□ -0.05
CDCA3-212ENST00000604599 BICD2Q8TD16 824 aa14.71□□□□□ -0.05
CDCA3-212ENST00000604599 SURF6O75683 361 aaKnown RBP14.71□□□□□ -0.06
CDCA3-212ENST00000604599 PTH1RQ03431 593 aa14.71□□□□□ -0.06
CDCA3-212ENST00000604599 EIF4A2Q14240 407 aaKnown RBP14.71□□□□□ -0.06
CDCA3-212ENST00000604599 CNTROBQ8N137 903 aa14.71□□□□□ -0.06
CDCA3-212ENST00000604599 NOL10Q9BSC4 688 aaKnown RBP14.71□□□□□ -0.06
CDCA3-212ENST00000604599 STK31Q9BXU1 1019 aa14.71□□□□□ -0.06
CDCA3-212ENST00000604599 CLSTN2Q9H4D0 955 aa14.71□□□□□ -0.06
CDCA3-212ENST00000604599 DDX19AQ9NUU7 478 aaKnown RBP14.71□□□□□ -0.06
CDCA3-212ENST00000604599 CYP46A1Q9Y6A2 500 aa14.71□□□□□ -0.06
CDCA3-212ENST00000604599 SOS1Q07889 1333 aaPredicted RBP14.71□□□□□ -0.06
CDCA3-212ENST00000604599 FLIIQ13045 1269 aa14.7□□□□□ -0.06
CDCA3-212ENST00000604599 VPS53Q5VIR6 699 aa14.7□□□□□ -0.06
CDCA3-212ENST00000604599 DNAJC2Q99543 621 aaKnown RBP14.7□□□□□ -0.06
CDCA3-212ENST00000604599 SH2B1Q9NRF2 756 aaPredicted RBP14.7□□□□□ -0.06
CDCA3-212ENST00000604599 USP16Q9Y5T5 823 aa14.7□□□□□ -0.06
CDCA3-212ENST00000604599 ELP1O95163 1332 aa14.7□□□□□ -0.06
CDCA3-212ENST00000604599 FOXO3O43524 673 aa14.7□□□□□ -0.06
CDCA3-212ENST00000604599 TTC21AQ8NDW8 1320 aa14.7□□□□□ -0.06
CDCA3-212ENST00000604599 NCKAP5LQ9HCH0 1330 aa14.7□□□□□ -0.06
CDCA3-212ENST00000604599 GOLGA6L19H0YKK7 550 aa14.69□□□□□ -0.06
CDCA3-212ENST00000604599 SLU7O95391 586 aaKnown RBP14.69□□□□□ -0.06
CDCA3-212ENST00000604599 ZSCAN31Q96LW9 406 aaPredicted RBP14.69□□□□□ -0.06
CDCA3-212ENST00000604599 TPCN1Q9ULQ1 816 aa14.69□□□□□ -0.06
CDCA3-212ENST00000604599 NPHP3Q7Z494 1330 aa14.69□□□□□ -0.06
CDCA3-212ENST00000604599 AATKQ6ZMQ8 1374 aa14.69□□□□□ -0.06
CDCA3-212ENST00000604599 EDC4Q6P2E9 1401 aaKnown RBP14.69□□□□□ -0.06
CDCA3-212ENST00000604599 CCDC69A6NI79 296 aa14.69□□□□□ -0.06
CDCA3-212ENST00000604599 COL9A3Q14050 684 aaPredicted RBP14.69□□□□□ -0.06
CDCA3-212ENST00000604599 SYTL4Q96C24 671 aaPredicted RBP14.69□□□□□ -0.06
CDCA3-212ENST00000604599 TCEANC2Q96MN5 208 aa14.69□□□□□ -0.06
CDCA3-212ENST00000604599 ERCC6LQ2NKX8 1250 aa14.69□□□□□ -0.06
CDCA3-212ENST00000604599 TRIM34Q9BYJ4 488 aa14.69□□□□□ -0.06
CDCA3-212ENST00000604599 CRB1P82279 1406 aa14.68□□□□□ -0.06
CDCA3-212ENST00000604599 TULP2O00295 520 aa14.68□□□□□ -0.06
CDCA3-212ENST00000604599 UBTFL1P0CB47 393 aaPredicted RBP14.68□□□□□ -0.06
CDCA3-212ENST00000604599 HNRNPH2P55795 449 aaKnown RBP14.68□□□□□ -0.06
CDCA3-212ENST00000604599 RBM43Q6ZSC3 357 aaKnown RBP14.68□□□□□ -0.06
CDCA3-212ENST00000604599 C11orf57Q6ZUT1 292 aaPredicted RBP14.68□□□□□ -0.06
CDCA3-212ENST00000604599 RHPN1Q8TCX5 695 aa14.68□□□□□ -0.06
CDCA3-212ENST00000604599 LEO1Q8WVC0 666 aaPredicted RBP14.68□□□□□ -0.06
CDCA3-212ENST00000604599 KIF1BPQ96EK5 621 aa14.68□□□□□ -0.06
CDCA3-212ENST00000604599 SCAND2PQ9GZW5 306 aaPredicted RBP14.68□□□□□ -0.06
CDCA3-212ENST00000604599 A0A087WWV3 80 aa14.68□□□□□ -0.06
CDCA3-212ENST00000604599 SLFNL1Q499Z3 407 aa14.68□□□□□ -0.06
CDCA3-212ENST00000604599 LRRN4CLQ8ND94 238 aa14.68□□□□□ -0.06
CDCA3-212ENST00000604599 CYP2C19P33261 490 aa14.67□□□□□ -0.06
CDCA3-212ENST00000604599 ZSWIM6Q9HCJ5 1215 aa14.67□□□□□ -0.06
CDCA3-212ENST00000604599 CDC25BP30305 580 aa14.67□□□□□ -0.06
CDCA3-212ENST00000604599 CCZ1BP86790 482 aa14.67□□□□□ -0.06
CDCA3-212ENST00000604599 CCZ1P86791 482 aaPredicted RBP14.67□□□□□ -0.06
CDCA3-212ENST00000604599 PPP1R42Q7Z4L9 355 aa14.67□□□□□ -0.06
CDCA3-212ENST00000604599 CCAR2Q8N163 923 aaKnown RBP14.67□□□□□ -0.06
CDCA3-212ENST00000604599 PGBD1Q96JS3 809 aa14.67□□□□□ -0.06
CDCA3-212ENST00000604599 CHMP4AQ9BY43 222 aa14.67□□□□□ -0.06
CDCA3-212ENST00000604599 USP44Q9H0E7 712 aa14.67□□□□□ -0.06
CDCA3-212ENST00000604599 RAB11FIP3O75154 756 aa14.66□□□□□ -0.06
CDCA3-212ENST00000604599 SLC20A2Q08357 652 aa14.66□□□□□ -0.06
CDCA3-212ENST00000604599 CPS1P31327 1500 aa14.66□□□□□ -0.06
CDCA3-212ENST00000604599 BMS1Q14692 1282 aaKnown RBP14.66□□□□□ -0.06
CDCA3-212ENST00000604599 LARP1Q6PKG0 1096 aaKnown RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms