RNA–Protein interactions for RNA: ENST00000604440.5

SH3D19-212, Transcript of SH3 domain containing 19, humanhuman

TSL 4

Gene SH3D19, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-212ENST00000604440 CABLES1Q8TDN4 633 aa12.47□□□□□ -0.41
SH3D19-212ENST00000604440 CENPJQ9HC77 1338 aaPredicted RBP12.46□□□□□ -0.41
SH3D19-212ENST00000604440 FAM83GA6ND36 823 aa12.46□□□□□ -0.41
SH3D19-212ENST00000604440 WNT7BP56706 349 aa12.46□□□□□ -0.41
SH3D19-212ENST00000604440 TREML4Q6UXN2 200 aa12.46□□□□□ -0.41
SH3D19-212ENST00000604440 CARD11Q9BXL7 1154 aa12.46□□□□□ -0.41
SH3D19-212ENST00000604440 PARD3Q8TEW0 1356 aa12.45□□□□□ -0.42
SH3D19-212ENST00000604440 SPATA31A5Q5VU36 1347 aa12.45□□□□□ -0.42
SH3D19-212ENST00000604440 SPATA31A7Q8IWB4 1347 aa12.45□□□□□ -0.42
SH3D19-212ENST00000604440 RETREG3Q86VR2 466 aa12.45□□□□□ -0.42
SH3D19-212ENST00000604440 NUTM1Q86Y26 1132 aa12.45□□□□□ -0.42
SH3D19-212ENST00000604440 RGPD3A6NKT7 1758 aaPredicted RBP12.45□□□□□ -0.42
SH3D19-212ENST00000604440 RGPD4Q7Z3J3 1758 aa12.45□□□□□ -0.42
SH3D19-212ENST00000604440 GPRASP1Q5JY77 1395 aa12.44□□□□□ -0.42
SH3D19-212ENST00000604440 TULP4Q9NRJ4 1543 aa12.44□□□□□ -0.42
SH3D19-212ENST00000604440 C11orf95C9JLR9 678 aaPredicted RBP12.44□□□□□ -0.42
SH3D19-212ENST00000604440 WASLO00401 505 aaPredicted RBP12.44□□□□□ -0.42
SH3D19-212ENST00000604440 PRR36Q9H6K5 1346 aa12.43□□□□□ -0.42
SH3D19-212ENST00000604440 ITSN1Q15811 1721 aa12.43□□□□□ -0.42
SH3D19-212ENST00000604440 RC3H1Q5TC82 1133 aaKnown RBP12.43□□□□□ -0.42
SH3D19-212ENST00000604440 KRI1Q8N9T8 703 aaKnown RBP12.43□□□□□ -0.42
SH3D19-212ENST00000604440 PMFBP1Q8TBY8 1022 aa12.43□□□□□ -0.42
SH3D19-212ENST00000604440 CDK19Q9BWU1 502 aa12.43□□□□□ -0.42
SH3D19-212ENST00000604440 PCDHGC3Q9UN70 934 aa12.43□□□□□ -0.42
SH3D19-212ENST00000604440 EIF3AQ14152 1382 aaKnown RBP12.43□□□□□ -0.42
SH3D19-212ENST00000604440 R3HDM1Q15032 1099 aaKnown RBP12.42□□□□□ -0.42
SH3D19-212ENST00000604440 CCDC9Q9Y3X0 531 aaKnown RBP12.42□□□□□ -0.42
SH3D19-212ENST00000604440 UTRNP46939 3433 aa12.42□□□□□ -0.42
SH3D19-212ENST00000604440 ATP7BP35670 1465 aa12.41□□□□□ -0.42
SH3D19-212ENST00000604440 FDX1P10109 184 aa12.41□□□□□ -0.42
SH3D19-212ENST00000604440 SRPK2P78362 688 aaKnown RBP12.41□□□□□ -0.42
SH3D19-212ENST00000604440 HPS1Q92902 700 aa12.41□□□□□ -0.42
SH3D19-212ENST00000604440 CAMKK2Q96RR4 588 aa12.41□□□□□ -0.42
SH3D19-212ENST00000604440 NUDT12Q9BQG2 462 aa12.41□□□□□ -0.42
SH3D19-212ENST00000604440 ATP13A2Q9NQ11 1180 aa12.41□□□□□ -0.42
SH3D19-212ENST00000604440 BTG4Q9NY30 223 aa12.41□□□□□ -0.42
SH3D19-212ENST00000604440 PARP4Q9UKK3 1724 aaKnown RBP12.4□□□□□ -0.42
SH3D19-212ENST00000604440 TOPAZ1Q8N9V7 1692 aa12.4□□□□□ -0.42
SH3D19-212ENST00000604440 LMO7Q8WWI1 1683 aa12.4□□□□□ -0.42
SH3D19-212ENST00000604440 NRKQ7Z2Y5 1582 aa12.39□□□□□ -0.43
SH3D19-212ENST00000604440 PTCRAQ6ISU1 281 aaPredicted RBP12.39□□□□□ -0.43
SH3D19-212ENST00000604440 NUDT16Q96DE0 195 aaKnown RBP12.39□□□□□ -0.43
SH3D19-212ENST00000604440 TIMELESSQ9UNS1 1208 aa12.39□□□□□ -0.43
SH3D19-212ENST00000604440 SPATA31A1Q5TZJ5 1347 aa12.38□□□□□ -0.43
SH3D19-212ENST00000604440 CASZ1Q86V15 1759 aa12.38□□□□□ -0.43
SH3D19-212ENST00000604440 PEAK1Q9H792 1746 aa12.38□□□□□ -0.43
SH3D19-212ENST00000604440 SSTR3P32745 418 aaPredicted RBP12.38□□□□□ -0.43
SH3D19-212ENST00000604440 EZH2Q15910 746 aaKnown RBP12.38□□□□□ -0.43
SH3D19-212ENST00000604440 SPIRE2Q8WWL2 714 aa12.38□□□□□ -0.43
SH3D19-212ENST00000604440 FAM182BQ5T319 152 aa12.37□□□□□ -0.43
SH3D19-212ENST00000604440 BARGINQ6ZT62 677 aa12.37□□□□□ -0.43
SH3D19-212ENST00000604440 USP47Q96K76 1375 aa12.37□□□□□ -0.43
SH3D19-212ENST00000604440 SBF2Q86WG5 1849 aa12.37□□□□□ -0.43
SH3D19-212ENST00000604440 EVC2Q86UK5 1308 aa12.37□□□□□ -0.43
SH3D19-212ENST00000604440 NINLQ9Y2I6 1382 aa12.36□□□□□ -0.43
SH3D19-212ENST00000604440 ST20-MTHFSA0A0A6YYL1 179 aa12.36□□□□□ -0.43
SH3D19-212ENST00000604440 C6orf229H3BNL8 230 aa12.36□□□□□ -0.43
SH3D19-212ENST00000604440 AMHR2Q16671 573 aa12.36□□□□□ -0.43
SH3D19-212ENST00000604440 NGDNQ8NEJ9 315 aaKnown RBP12.36□□□□□ -0.43
SH3D19-212ENST00000604440 PPIP5K1Q6PFW1 1433 aa12.36□□□□□ -0.43
SH3D19-212ENST00000604440 CAMTA1Q9Y6Y1 1673 aa12.35□□□□□ -0.43
SH3D19-212ENST00000604440 ZMYND10O75800 440 aa12.35□□□□□ -0.43
SH3D19-212ENST00000604440 FAM196AQ6ZSG2 479 aa12.35□□□□□ -0.43
SH3D19-212ENST00000604440 WNK3Q9BYP7 1800 aa12.34□□□□□ -0.43
SH3D19-212ENST00000604440 CCNYL3P0C7X3 344 aa12.34□□□□□ -0.43
SH3D19-212ENST00000604440 MS4A1P11836 297 aa12.34□□□□□ -0.43
SH3D19-212ENST00000604440 SNRPBP14678 240 aaKnown RBP12.34□□□□□ -0.43
SH3D19-212ENST00000604440 YY1P25490 414 aa12.34□□□□□ -0.43
SH3D19-212ENST00000604440 NFX1Q12986 1120 aaKnown RBP12.34□□□□□ -0.43
SH3D19-212ENST00000604440 TTLL12Q14166 644 aaPredicted RBP12.34□□□□□ -0.43
SH3D19-212ENST00000604440 TRIM47Q96LD4 638 aa12.34□□□□□ -0.43
SH3D19-212ENST00000604440 KIAA0232Q92628 1395 aa12.33□□□□□ -0.44
SH3D19-212ENST00000604440 MOXD2PA6NHM9 499 aa12.33□□□□□ -0.44
SH3D19-212ENST00000604440 SIAH2O43255 324 aa12.33□□□□□ -0.44
SH3D19-212ENST00000604440 WFS1O76024 890 aa12.33□□□□□ -0.44
SH3D19-212ENST00000604440 ALDH1A1P00352 501 aa12.33□□□□□ -0.44
SH3D19-212ENST00000604440 NDUFV2P19404 249 aa12.33□□□□□ -0.44
SH3D19-212ENST00000604440 SSH2Q76I76 1423 aa12.33□□□□□ -0.44
SH3D19-212ENST00000604440 ACEP12821 1306 aa12.33□□□□□ -0.44
SH3D19-212ENST00000604440 LRRC37A3O60309 1634 aa12.33□□□□□ -0.44
SH3D19-212ENST00000604440 TRIM37O94972 964 aa12.32□□□□□ -0.44
SH3D19-212ENST00000604440 ZEB1P37275 1124 aaPredicted RBP12.32□□□□□ -0.44
SH3D19-212ENST00000604440 PTPRNQ16849 979 aa12.32□□□□□ -0.44
SH3D19-212ENST00000604440 GIGYF2Q6Y7W6 1299 aaKnown RBP12.32□□□□□ -0.44
SH3D19-212ENST00000604440 PRDM11Q9NQV5 511 aa12.32□□□□□ -0.44
SH3D19-212ENST00000604440 CABP1Q9NZU7 370 aa12.32□□□□□ -0.44
SH3D19-212ENST00000604440 SBNO2Q9Y2G9 1366 aa12.31□□□□□ -0.44
SH3D19-212ENST00000604440 EHBP1Q8NDI1 1231 aa12.31□□□□□ -0.44
SH3D19-212ENST00000604440 TESK2Q96S53 571 aa12.31□□□□□ -0.44
SH3D19-212ENST00000604440 SENP2Q9HC62 589 aa12.31□□□□□ -0.44
SH3D19-212ENST00000604440 CPDO75976 1380 aa12.3□□□□□ -0.44
SH3D19-212ENST00000604440 APBA3O96018 575 aa12.3□□□□□ -0.44
SH3D19-212ENST00000604440 SH3BP2P78314 561 aa12.3□□□□□ -0.44
SH3D19-212ENST00000604440 ZC3H15Q8WU90 426 aaKnown RBP12.3□□□□□ -0.44
SH3D19-212ENST00000604440 POLR3AO14802 1390 aaPredicted RBP12.3□□□□□ -0.44
SH3D19-212ENST00000604440 MYOM1P52179 1685 aa12.29□□□□□ -0.44
SH3D19-212ENST00000604440 PLEKHG3A1L390 1219 aa12.29□□□□□ -0.44
SH3D19-212ENST00000604440 NUTM2GQ5VZR2 741 aa12.29□□□□□ -0.44
SH3D19-212ENST00000604440 TMC1Q8TDI8 760 aa12.29□□□□□ -0.44
SH3D19-212ENST00000604440 CHD4Q14839 1912 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms