RNA–Protein interactions for RNA: ENST00000604423.1

SRGAP2-211, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 1 (best)

Gene SRGAP2, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-211ENST00000604423 USP32Q8NFA0 1604 aa7.85□□□□□ -1.15
SRGAP2-211ENST00000604423 ZBTB7CA1YPR0 619 aa7.85□□□□□ -1.15
SRGAP2-211ENST00000604423 CBX1P83916 185 aa7.85□□□□□ -1.15
SRGAP2-211ENST00000604423 CHAF1AQ13111 956 aaPredicted RBP7.85□□□□□ -1.15
SRGAP2-211ENST00000604423 TSR2Q969E8 191 aaKnown RBP7.85□□□□□ -1.15
SRGAP2-211ENST00000604423 CARD14Q9BXL6 1004 aa7.85□□□□□ -1.15
SRGAP2-211ENST00000604423 GPBP1L1Q9HC44 474 aaPredicted RBP7.85□□□□□ -1.15
SRGAP2-211ENST00000604423 NOB1Q9ULX3 412 aaKnown RBP7.85□□□□□ -1.15
SRGAP2-211ENST00000604423 ERCC6Q03468 1493 aa7.85□□□□□ -1.15
SRGAP2-211ENST00000604423 MRC2Q9UBG0 1479 aa7.85□□□□□ -1.15
SRGAP2-211ENST00000604423 U2AF1L5P0DN76 240 aaPredicted RBP7.85□□□□□ -1.15
SRGAP2-211ENST00000604423 U2AF1Q01081 240 aaKnown RBP eCLIP7.85□□□□□ -1.15
SRGAP2-211ENST00000604423 EXOSC9Q06265 439 aaKnown RBP7.85□□□□□ -1.15
SRGAP2-211ENST00000604423 MSS51Q4VC12 460 aa7.85□□□□□ -1.15
SRGAP2-211ENST00000604423 TAF3Q5VWG9 929 aa7.85□□□□□ -1.15
SRGAP2-211ENST00000604423 SPRYD7Q5W111 196 aa7.85□□□□□ -1.15
SRGAP2-211ENST00000604423 Q6ZNB5 142 aa7.85□□□□□ -1.15
SRGAP2-211ENST00000604423 RNF214Q8ND24 703 aa7.85□□□□□ -1.15
SRGAP2-211ENST00000604423 SSH1Q8WYL5 1049 aa7.85□□□□□ -1.15
SRGAP2-211ENST00000604423 TSPY26PQ9H489 355 aa7.85□□□□□ -1.15
SRGAP2-211ENST00000604423 ZBTB40Q9NUA8 1239 aa7.85□□□□□ -1.15
SRGAP2-211ENST00000604423 KIF3AQ9Y496 699 aa7.85□□□□□ -1.15
SRGAP2-211ENST00000604423 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.85□□□□□ -1.15
SRGAP2-211ENST00000604423 ABCA6Q8N139 1617 aa7.84□□□□□ -1.15
SRGAP2-211ENST00000604423 PDE4CQ08493 712 aa7.84□□□□□ -1.15
SRGAP2-211ENST00000604423 CASC1Q6TDU7 716 aa7.84□□□□□ -1.15
SRGAP2-211ENST00000604423 GPT2Q8TD30 523 aa7.84□□□□□ -1.15
SRGAP2-211ENST00000604423 MAP3K4Q9Y6R4 1608 aa7.84□□□□□ -1.16
SRGAP2-211ENST00000604423 ZNF697Q5TEC3 545 aa7.83□□□□□ -1.16
SRGAP2-211ENST00000604423 CCDC24Q8N4L8 307 aa7.83□□□□□ -1.16
SRGAP2-211ENST00000604423 CYP2E1P05181 493 aaPredicted RBP7.83□□□□□ -1.16
SRGAP2-211ENST00000604423 MTHFSP49914 203 aa7.83□□□□□ -1.16
SRGAP2-211ENST00000604423 PDCL2Q8N4E4 241 aa7.83□□□□□ -1.16
SRGAP2-211ENST00000604423 PIBF1Q8WXW3 757 aa7.83□□□□□ -1.16
SRGAP2-211ENST00000604423 TMEM63CQ9P1W3 806 aa7.83□□□□□ -1.16
SRGAP2-211ENST00000604423 QRICH2Q9H0J4 1663 aa7.82□□□□□ -1.16
SRGAP2-211ENST00000604423 MED14O60244 1454 aa7.82□□□□□ -1.16
SRGAP2-211ENST00000604423 TNFRSF10AO00220 468 aa7.82□□□□□ -1.16
SRGAP2-211ENST00000604423 CDK11BP21127 795 aaKnown RBP7.82□□□□□ -1.16
SRGAP2-211ENST00000604423 GTF2F1P35269 517 aaKnown RBP eCLIP7.82□□□□□ -1.16
SRGAP2-211ENST00000604423 NOS1P29475 1434 aa7.82□□□□□ -1.16
SRGAP2-211ENST00000604423 ZC3H13Q5T200 1668 aaKnown RBP7.82□□□□□ -1.16
SRGAP2-211ENST00000604423 PTPRTO14522 1441 aa7.81□□□□□ -1.16
SRGAP2-211ENST00000604423 INTS3Q68E01 1043 aaKnown RBP7.81□□□□□ -1.16
SRGAP2-211ENST00000604423 DIAPH3Q9NSV4 1193 aa7.81□□□□□ -1.16
SRGAP2-211ENST00000604423 INO80Q9ULG1 1556 aaPredicted RBP7.81□□□□□ -1.16
SRGAP2-211ENST00000604423 KIF1BO60333 1816 aa7.81□□□□□ -1.16
SRGAP2-211ENST00000604423 MYOM2P54296 1465 aa7.81□□□□□ -1.16
SRGAP2-211ENST00000604423 PPIP5K1Q6PFW1 1433 aa7.81□□□□□ -1.16
SRGAP2-211ENST00000604423 PKP1Q13835 747 aa7.81□□□□□ -1.16
SRGAP2-211ENST00000604423 NOLC1Q14978 699 aaKnown RBP eCLIP7.81□□□□□ -1.16
SRGAP2-211ENST00000604423 ZNF771Q7L3S4 317 aaPredicted RBP7.81□□□□□ -1.16
SRGAP2-211ENST00000604423 ZNF598Q86UK7 904 aaKnown RBP7.81□□□□□ -1.16
SRGAP2-211ENST00000604423 RETREG3Q86VR2 466 aa7.81□□□□□ -1.16
SRGAP2-211ENST00000604423 FAM184AQ8NB25 1140 aa7.81□□□□□ -1.16
SRGAP2-211ENST00000604423 CHMP7Q8WUX9 453 aaPredicted RBP7.81□□□□□ -1.16
SRGAP2-211ENST00000604423 SBNO2Q9Y2G9 1366 aa7.81□□□□□ -1.16
SRGAP2-211ENST00000604423 IL16Q14005 1332 aa7.8□□□□□ -1.16
SRGAP2-211ENST00000604423 TET3O43151 1660 aa7.8□□□□□ -1.16
SRGAP2-211ENST00000604423 FOXC1Q12948 553 aa7.8□□□□□ -1.16
SRGAP2-211ENST00000604423 ALDH1L2Q3SY69 923 aa7.8□□□□□ -1.16
SRGAP2-211ENST00000604423 RSBN1LQ6PCB5 846 aaPredicted RBP7.8□□□□□ -1.16
SRGAP2-211ENST00000604423 TRIM67Q6ZTA4 783 aa7.8□□□□□ -1.16
SRGAP2-211ENST00000604423 NSD2O96028 1365 aa7.8□□□□□ -1.16
SRGAP2-211ENST00000604423 TRAPPC8Q9Y2L5 1435 aa7.8□□□□□ -1.16
SRGAP2-211ENST00000604423 U2SURPO15042 1029 aaKnown RBP7.79□□□□□ -1.16
SRGAP2-211ENST00000604423 ZBTB24O43167 697 aaPredicted RBP7.79□□□□□ -1.16
SRGAP2-211ENST00000604423 DXOO77932 396 aaKnown RBP7.79□□□□□ -1.16
SRGAP2-211ENST00000604423 MMP16P51512 607 aa7.79□□□□□ -1.16
SRGAP2-211ENST00000604423 NEURL4Q96JN8 1562 aa7.79□□□□□ -1.16
SRGAP2-211ENST00000604423 YEATS2Q9ULM3 1422 aa7.79□□□□□ -1.16
SRGAP2-211ENST00000604423 FKBP5Q13451 457 aaPredicted RBP7.79□□□□□ -1.16
SRGAP2-211ENST00000604423 MTMR2Q13614 643 aa7.79□□□□□ -1.16
SRGAP2-211ENST00000604423 UVSSAQ2YD98 709 aa7.79□□□□□ -1.16
SRGAP2-211ENST00000604423 FOXD4L5Q5VV16 416 aaPredicted RBP7.79□□□□□ -1.16
SRGAP2-211ENST00000604423 ZGPATQ8N5A5 531 aaKnown RBP7.79□□□□□ -1.16
SRGAP2-211ENST00000604423 FOXD4L4Q8WXT5 416 aaPredicted RBP7.79□□□□□ -1.16
SRGAP2-211ENST00000604423 TSC1Q92574 1164 aa7.79□□□□□ -1.16
SRGAP2-211ENST00000604423 C1orf115Q9H7X2 142 aa7.79□□□□□ -1.16
SRGAP2-211ENST00000604423 IFT172Q9UG01 1749 aa7.79□□□□□ -1.16
SRGAP2-211ENST00000604423 REC8O95072 547 aa7.78□□□□□ -1.16
SRGAP2-211ENST00000604423 JUNDP17535 347 aa7.78□□□□□ -1.16
SRGAP2-211ENST00000604423 TMPOP42166 694 aaKnown RBP7.78□□□□□ -1.16
SRGAP2-211ENST00000604423 ATP2B3Q16720 1220 aa7.78□□□□□ -1.16
SRGAP2-211ENST00000604423 CFAP70Q5T0N1 1121 aa7.78□□□□□ -1.16
SRGAP2-211ENST00000604423 MYSM1Q5VVJ2 828 aa7.78□□□□□ -1.16
SRGAP2-211ENST00000604423 KDM4CQ9H3R0 1056 aa7.78□□□□□ -1.16
SRGAP2-211ENST00000604423 ANKRD36BQ8N2N9 1353 aa7.78□□□□□ -1.16
SRGAP2-211ENST00000604423 GTF2E1P29083 439 aaPredicted RBP7.78□□□□□ -1.16
SRGAP2-211ENST00000604423 DIXDC1Q155Q3 683 aa7.78□□□□□ -1.16
SRGAP2-211ENST00000604423 RIC3Q7Z5B4 369 aa7.78□□□□□ -1.16
SRGAP2-211ENST00000604423 PRR7Q8TB68 274 aa7.78□□□□□ -1.16
SRGAP2-211ENST00000604423 CABLES1Q8TDN4 633 aa7.78□□□□□ -1.16
SRGAP2-211ENST00000604423 JARID2Q92833 1246 aaPredicted RBP7.78□□□□□ -1.16
SRGAP2-211ENST00000604423 LIMD1Q9UGP4 676 aa7.78□□□□□ -1.16
SRGAP2-211ENST00000604423 USP25Q9UHP3 1055 aa7.78□□□□□ -1.16
SRGAP2-211ENST00000604423 CD109Q6YHK3 1445 aa7.77□□□□□ -1.16
SRGAP2-211ENST00000604423 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.77□□□□□ -1.17
SRGAP2-211ENST00000604423 GOLGA6L6A8MZA4 724 aa7.77□□□□□ -1.17
SRGAP2-211ENST00000604423 TPM3P06753 285 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms