RNA–Protein interactions for RNA: ENST00000603334.1

DDX55P1-201, Transcript of DEAD-box helicase 55 pseudogene 1, humanhuman

BASIC

Gene DDX55P1, Length 1,414 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55P1-201ENST00000603334 CACNA1FO60840 1977 aa13.12□□□□□ -0.31
DDX55P1-201ENST00000603334 GNPATO15228 680 aa13.12□□□□□ -0.31
DDX55P1-201ENST00000603334 CYP19A1P11511 503 aaPredicted RBP13.12□□□□□ -0.31
DDX55P1-201ENST00000603334 CRKLP46109 303 aaKnown RBP13.12□□□□□ -0.31
DDX55P1-201ENST00000603334 MRPL50Q8N5N7 158 aaKnown RBP13.12□□□□□ -0.31
DDX55P1-201ENST00000603334 NLGN2Q8NFZ4 835 aa13.12□□□□□ -0.31
DDX55P1-201ENST00000603334 PANK1Q8TE04 598 aa13.12□□□□□ -0.31
DDX55P1-201ENST00000603334 TRAPPC3LQ5T215 181 aa13.11□□□□□ -0.31
DDX55P1-201ENST00000603334 DNAJC10Q8IXB1 793 aa13.11□□□□□ -0.31
DDX55P1-201ENST00000603334 DZIP1LQ8IYY4 767 aaKnown RBP13.11□□□□□ -0.31
DDX55P1-201ENST00000603334 CCDC87Q9NVE4 849 aa13.11□□□□□ -0.31
DDX55P1-201ENST00000603334 COG6Q9Y2V7 657 aa13.11□□□□□ -0.31
DDX55P1-201ENST00000603334 KIF16BQ96L93 1317 aa13.1□□□□□ -0.31
DDX55P1-201ENST00000603334 KCNQ3O43525 872 aa13.1□□□□□ -0.31
DDX55P1-201ENST00000603334 POLD1P28340 1107 aa13.1□□□□□ -0.31
DDX55P1-201ENST00000603334 INTS5Q6P9B9 1019 aaKnown RBP13.1□□□□□ -0.31
DDX55P1-201ENST00000603334 NECTIN2Q92692 538 aa13.1□□□□□ -0.31
DDX55P1-201ENST00000603334 STK31Q9BXU1 1019 aa13.1□□□□□ -0.31
DDX55P1-201ENST00000603334 TNNQ9UQP3 1299 aa13.1□□□□□ -0.31
DDX55P1-201ENST00000603334 KDM3BQ7LBC6 1761 aa13.09□□□□□ -0.31
DDX55P1-201ENST00000603334 EIF2S2P20042 333 aaKnown RBP13.09□□□□□ -0.31
DDX55P1-201ENST00000603334 CCDC30Q5VVM6 783 aa13.09□□□□□ -0.31
DDX55P1-201ENST00000603334 ATF7IPQ6VMQ6 1270 aa13.09□□□□□ -0.31
DDX55P1-201ENST00000603334 PELP1Q8IZL8 1130 aaKnown RBP13.09□□□□□ -0.31
DDX55P1-201ENST00000603334 A0A087WZG4 1122 aa13.08□□□□□ -0.32
DDX55P1-201ENST00000603334 EIF4A1P60842 406 aaKnown RBP13.08□□□□□ -0.32
DDX55P1-201ENST00000603334 CHMP4AQ9BY43 222 aa13.08□□□□□ -0.32
DDX55P1-201ENST00000603334 BRCA1P38398 1863 aaKnown RBP13.08□□□□□ -0.32
DDX55P1-201ENST00000603334 ZBTB22O15209 634 aa13.07□□□□□ -0.32
DDX55P1-201ENST00000603334 GIGYF1O75420 1035 aaPredicted RBP13.07□□□□□ -0.32
DDX55P1-201ENST00000603334 RFC4P35249 363 aa13.07□□□□□ -0.32
DDX55P1-201ENST00000603334 IL6STP40189 918 aaPredicted RBP13.07□□□□□ -0.32
DDX55P1-201ENST00000603334 BRPF1P55201 1214 aaPredicted RBP13.07□□□□□ -0.32
DDX55P1-201ENST00000603334 NLGN1Q8N2Q7 840 aa13.07□□□□□ -0.32
DDX55P1-201ENST00000603334 ARHGEF1Q92888 912 aaKnown RBP13.07□□□□□ -0.32
DDX55P1-201ENST00000603334 SOS1Q07889 1333 aaPredicted RBP13.07□□□□□ -0.32
DDX55P1-201ENST00000603334 N4BP2Q86UW6 1770 aaPredicted RBP13.07□□□□□ -0.32
DDX55P1-201ENST00000603334 RGL2O15211 777 aa13.06□□□□□ -0.32
DDX55P1-201ENST00000603334 HOXB7P09629 217 aa13.06□□□□□ -0.32
DDX55P1-201ENST00000603334 ITPRIPQ8IWB1 547 aa13.06□□□□□ -0.32
DDX55P1-201ENST00000603334 API5Q9BZZ5 524 aaKnown RBP13.06□□□□□ -0.32
DDX55P1-201ENST00000603334 ERBB4Q15303 1308 aa13.06□□□□□ -0.32
DDX55P1-201ENST00000603334 RLBP1P12271 317 aa13.05□□□□□ -0.32
DDX55P1-201ENST00000603334 GYS1P13807 737 aa13.05□□□□□ -0.32
DDX55P1-201ENST00000603334 TRIM27P14373 513 aa13.05□□□□□ -0.32
DDX55P1-201ENST00000603334 EIF5P55010 431 aaKnown RBP13.05□□□□□ -0.32
DDX55P1-201ENST00000603334 HDGFL1Q5TGJ6 251 aa13.05□□□□□ -0.32
DDX55P1-201ENST00000603334 NPM2Q86SE8 214 aaKnown RBP13.05□□□□□ -0.32
DDX55P1-201ENST00000603334 ARHGAP45Q92619 1136 aa13.05□□□□□ -0.32
DDX55P1-201ENST00000603334 AFDNP55196 1824 aaKnown RBP13.05□□□□□ -0.32
DDX55P1-201ENST00000603334 YBX3P16989 372 aaKnown RBP eCLIP13.05□□□□□ -0.32
DDX55P1-201ENST00000603334 MVPQ14764 893 aaKnown RBP13.05□□□□□ -0.32
DDX55P1-201ENST00000603334 KLHL34Q8N239 644 aa13.05□□□□□ -0.32
DDX55P1-201ENST00000603334 ZBTB1Q9Y2K1 713 aa13.05□□□□□ -0.32
DDX55P1-201ENST00000603334 USP16Q9Y5T5 823 aa13.05□□□□□ -0.32
DDX55P1-201ENST00000603334 NRXN2Q9P2S2 1712 aa13.04□□□□□ -0.32
DDX55P1-201ENST00000603334 YY1P25490 414 aa13.04□□□□□ -0.32
DDX55P1-201ENST00000603334 TMEM57Q8N5G2 664 aa13.04□□□□□ -0.32
DDX55P1-201ENST00000603334 NARFQ9UHQ1 456 aa13.04□□□□□ -0.32
DDX55P1-201ENST00000603334 CD2APQ9Y5K6 639 aa13.04□□□□□ -0.32
DDX55P1-201ENST00000603334 SCN7AQ01118 1682 aa13.04□□□□□ -0.32
DDX55P1-201ENST00000603334 USP42Q9H9J4 1324 aaKnown RBP13.04□□□□□ -0.32
DDX55P1-201ENST00000603334 ZPR1O75312 459 aa13.03□□□□□ -0.32
DDX55P1-201ENST00000603334 ATXN8OSP0DMR3 200 aa13.03□□□□□ -0.32
DDX55P1-201ENST00000603334 SRP68Q9UHB9 627 aaKnown RBP13.03□□□□□ -0.32
DDX55P1-201ENST00000603334 DDX19BQ9UMR2 479 aa13.03□□□□□ -0.32
DDX55P1-201ENST00000603334 COL15A1P39059 1388 aa13.03□□□□□ -0.32
DDX55P1-201ENST00000603334 C10orf71Q711Q0 1435 aa13.03□□□□□ -0.32
DDX55P1-201ENST00000603334 A1BGP04217 495 aa13.02□□□□□ -0.33
DDX55P1-201ENST00000603334 MMP10P09238 476 aa13.02□□□□□ -0.33
DDX55P1-201ENST00000603334 G2E3Q7L622 706 aa13.02□□□□□ -0.33
DDX55P1-201ENST00000603334 PTPRCP08575 1304 aa13.02□□□□□ -0.33
DDX55P1-201ENST00000603334 PXDNLA1KZ92 1463 aa13.02□□□□□ -0.33
DDX55P1-201ENST00000603334 BCORQ6W2J9 1755 aa13.01□□□□□ -0.33
DDX55P1-201ENST00000603334 FKBP5Q13451 457 aaPredicted RBP13.01□□□□□ -0.33
DDX55P1-201ENST00000603334 CHMP4BQ9H444 224 aaKnown RBP13.01□□□□□ -0.33
DDX55P1-201ENST00000603334 LAMB4A4D0S4 1761 aa13.01□□□□□ -0.33
DDX55P1-201ENST00000603334 PRAMEF22A3QJZ6 481 aa13□□□□□ -0.33
DDX55P1-201ENST00000603334 AAMPQ13685 434 aa13□□□□□ -0.33
DDX55P1-201ENST00000603334 SLC4A10Q6U841 1118 aa13□□□□□ -0.33
DDX55P1-201ENST00000603334 CLEC4GQ6UXB4 293 aa13□□□□□ -0.33
DDX55P1-201ENST00000603334 DDR1Q08345 913 aa12.99□□□□□ -0.33
DDX55P1-201ENST00000603334 FLIIQ13045 1269 aa12.99□□□□□ -0.33
DDX55P1-201ENST00000603334 GPR162Q16538 588 aa12.99□□□□□ -0.33
DDX55P1-201ENST00000603334 BCL2L12Q9HB09 334 aa12.99□□□□□ -0.33
DDX55P1-201ENST00000603334 CHPF2Q9P2E5 772 aa12.99□□□□□ -0.33
DDX55P1-201ENST00000603334 ARFGEF1Q9Y6D6 1849 aa12.98□□□□□ -0.33
DDX55P1-201ENST00000603334 NBPF26B4DH59 902 aa12.98□□□□□ -0.33
DDX55P1-201ENST00000603334 ANXA1P04083 346 aa12.98□□□□□ -0.33
DDX55P1-201ENST00000603334 USPL1Q5W0Q7 1092 aa12.98□□□□□ -0.33
DDX55P1-201ENST00000603334 NBPF10Q6P3W6 841 aaKnown RBP12.98□□□□□ -0.33
DDX55P1-201ENST00000603334 DZIP3Q86Y13 1208 aaKnown RBP12.98□□□□□ -0.33
DDX55P1-201ENST00000603334 NBPF15Q8N660 670 aa12.98□□□□□ -0.33
DDX55P1-201ENST00000603334 PHAXQ9H814 394 aaKnown RBP12.98□□□□□ -0.33
DDX55P1-201ENST00000603334 DBF4Q9UBU7 674 aaPredicted RBP12.98□□□□□ -0.33
DDX55P1-201ENST00000603334 ZNF652Q9Y2D9 606 aa12.98□□□□□ -0.33
DDX55P1-201ENST00000603334 DLEC1Q9Y238 1755 aa12.98□□□□□ -0.33
DDX55P1-201ENST00000603334 ERVV-1B6SEH8 477 aa12.97□□□□□ -0.33
DDX55P1-201ENST00000603334 F6X3S4 739 aa12.97□□□□□ -0.33
DDX55P1-201ENST00000603334 TM4SF1P30408 202 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms