RNA–Protein interactions for RNA: ENST00000602905.1

PPFIA3-213, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-213ENST00000602905 ERVV-1B6SEH8 477 aa20.62■□□□□ 0.89
PPFIA3-213ENST00000602905 ANXA1P04083 346 aa20.62■□□□□ 0.89
PPFIA3-213ENST00000602905 TM4SF1P30408 202 aa20.62■□□□□ 0.89
PPFIA3-213ENST00000602905 HNRNPUQ00839 825 aaKnown RBP eCLIP20.62■□□□□ 0.89
PPFIA3-213ENST00000602905 EXOSC9Q06265 439 aaKnown RBP20.62■□□□□ 0.89
PPFIA3-213ENST00000602905 AIMP1Q12904 312 aaKnown RBP20.62■□□□□ 0.89
PPFIA3-213ENST00000602905 NFIXQ14938 502 aa20.62■□□□□ 0.89
PPFIA3-213ENST00000602905 PROSER3Q2NL68 480 aa20.62■□□□□ 0.89
PPFIA3-213ENST00000602905 SETDB2Q96T68 719 aa20.62■□□□□ 0.89
PPFIA3-213ENST00000602905 STK31Q9BXU1 1019 aa20.62■□□□□ 0.89
PPFIA3-213ENST00000602905 SPINK5Q9NQ38 1064 aaPredicted RBP20.62■□□□□ 0.89
PPFIA3-213ENST00000602905 TBC1D9BQ66K14 1250 aa20.61■□□□□ 0.89
PPFIA3-213ENST00000602905 TTLL7Q6ZT98 887 aa20.61■□□□□ 0.89
PPFIA3-213ENST00000602905 COPS6Q7L5N1 327 aa20.61■□□□□ 0.89
PPFIA3-213ENST00000602905 SYT17Q9BSW7 474 aa20.61■□□□□ 0.89
PPFIA3-213ENST00000602905 CD2APQ9Y5K6 639 aa20.61■□□□□ 0.89
PPFIA3-213ENST00000602905 NPHP1O15259 732 aa20.6■□□□□ 0.89
PPFIA3-213ENST00000602905 XAGE3Q8WTP9 111 aa20.6■□□□□ 0.89
PPFIA3-213ENST00000602905 AFDNP55196 1824 aaKnown RBP20.6■□□□□ 0.89
PPFIA3-213ENST00000602905 DCAF8L1A6NGE4 600 aa20.59■□□□□ 0.89
PPFIA3-213ENST00000602905 POLRMTO00411 1230 aaKnown RBP20.59■□□□□ 0.89
PPFIA3-213ENST00000602905 DDR1Q08345 913 aa20.59■□□□□ 0.89
PPFIA3-213ENST00000602905 ZBTB3Q9H5J0 574 aa20.59■□□□□ 0.89
PPFIA3-213ENST00000602905 CARMIL3Q8ND23 1372 aa20.59■□□□□ 0.89
PPFIA3-213ENST00000602905 SERPINB2P05120 415 aa20.58■□□□□ 0.89
PPFIA3-213ENST00000602905 SLFN5Q08AF3 891 aa20.58■□□□□ 0.89
PPFIA3-213ENST00000602905 LRP10Q7Z4F1 713 aa20.58■□□□□ 0.89
PPFIA3-213ENST00000602905 NIP7Q9Y221 180 aaKnown RBP eCLIP20.58■□□□□ 0.89
PPFIA3-213ENST00000602905 HLFQ16534 295 aa20.57■□□□□ 0.88
PPFIA3-213ENST00000602905 VAMP4O75379 141 aa20.56■□□□□ 0.88
PPFIA3-213ENST00000602905 HSP90AB3PQ58FF7 597 aa20.56■□□□□ 0.88
PPFIA3-213ENST00000602905 GIGYF2Q6Y7W6 1299 aaKnown RBP20.56■□□□□ 0.88
PPFIA3-213ENST00000602905 KIF13BQ9NQT8 1826 aa20.55■□□□□ 0.88
PPFIA3-213ENST00000602905 DDX58O95786 925 aaKnown RBP20.55■□□□□ 0.88
PPFIA3-213ENST00000602905 ANKRD13DQ6ZTN6 518 aa20.55■□□□□ 0.88
PPFIA3-213ENST00000602905 CDCA7LQ96GN5 454 aa20.55■□□□□ 0.88
PPFIA3-213ENST00000602905 NRXN2Q9P2S2 1712 aa20.54■□□□□ 0.88
PPFIA3-213ENST00000602905 NBPF5PQ86XG9 351 aaPredicted RBP20.54■□□□□ 0.88
PPFIA3-213ENST00000602905 PLBD2Q8NHP8 589 aa20.54■□□□□ 0.88
PPFIA3-213ENST00000602905 C10orf71Q711Q0 1435 aa20.53■□□□□ 0.88
PPFIA3-213ENST00000602905 TCERG1O14776 1098 aaKnown RBP20.53■□□□□ 0.88
PPFIA3-213ENST00000602905 SLC4A2P04920 1241 aa20.53■□□□□ 0.88
PPFIA3-213ENST00000602905 ST5P78524 1137 aa20.53■□□□□ 0.88
PPFIA3-213ENST00000602905 RIC3Q7Z5B4 369 aa20.53■□□□□ 0.88
PPFIA3-213ENST00000602905 CNBD1Q8NA66 436 aa20.53■□□□□ 0.88
PPFIA3-213ENST00000602905 ANKRD36CQ5JPF3 1778 aa20.53■□□□□ 0.88
PPFIA3-213ENST00000602905 ATP10DQ9P241 1426 aa20.53■□□□□ 0.88
PPFIA3-213ENST00000602905 GTF2E1P29083 439 aaPredicted RBP20.52■□□□□ 0.88
PPFIA3-213ENST00000602905 TGFB2P61812 414 aa20.52■□□□□ 0.88
PPFIA3-213ENST00000602905 TPTE2Q6XPS3 522 aa20.52■□□□□ 0.88
PPFIA3-213ENST00000602905 NLGN2Q8NFZ4 835 aa20.52■□□□□ 0.88
PPFIA3-213ENST00000602905 NYXQ9GZU5 481 aa20.52■□□□□ 0.88
PPFIA3-213ENST00000602905 PHAXQ9H814 394 aaKnown RBP20.52■□□□□ 0.88
PPFIA3-213ENST00000602905 GPTP24298 496 aa20.51■□□□□ 0.87
PPFIA3-213ENST00000602905 PARP10Q53GL7 1025 aa20.51■□□□□ 0.87
PPFIA3-213ENST00000602905 ARFGEF2Q9Y6D5 1785 aa20.5■□□□□ 0.87
PPFIA3-213ENST00000602905 FAM177BA6PVY3 158 aa20.5■□□□□ 0.87
PPFIA3-213ENST00000602905 TCIRG1Q13488 830 aa20.5■□□□□ 0.87
PPFIA3-213ENST00000602905 PPP1R42Q7Z4L9 355 aa20.5■□□□□ 0.87
PPFIA3-213ENST00000602905 TRMT2AQ8IZ69 625 aaKnown RBP20.5■□□□□ 0.87
PPFIA3-213ENST00000602905 ZBED9Q6R2W3 1325 aa20.5■□□□□ 0.87
PPFIA3-213ENST00000602905 N4BP2Q86UW6 1770 aaPredicted RBP20.49■□□□□ 0.87
PPFIA3-213ENST00000602905 PRR5LQ6MZQ0 368 aa20.49■□□□□ 0.87
PPFIA3-213ENST00000602905 ZNF34Q8IZ26 560 aa20.49■□□□□ 0.87
PPFIA3-213ENST00000602905 ZNF428Q96B54 188 aa20.49■□□□□ 0.87
PPFIA3-213ENST00000602905 CT47B1P0C2W7 299 aaPredicted RBP20.48■□□□□ 0.87
PPFIA3-213ENST00000602905 PELP1Q8IZL8 1130 aaKnown RBP20.48■□□□□ 0.87
PPFIA3-213ENST00000602905 PDZRN3Q9UPQ7 1066 aa20.48■□□□□ 0.87
PPFIA3-213ENST00000602905 PDE6BP35913 854 aa20.47■□□□□ 0.87
PPFIA3-213ENST00000602905 FLIIQ13045 1269 aa20.47■□□□□ 0.87
PPFIA3-213ENST00000602905 BRIP1Q9BX63 1249 aa20.47■□□□□ 0.87
PPFIA3-213ENST00000602905 IBTKQ9P2D0 1353 aaPredicted RBP20.46■□□□□ 0.87
PPFIA3-213ENST00000602905 A0A0G2JLW4 131 aa20.46■□□□□ 0.87
PPFIA3-213ENST00000602905 FKBP5Q13451 457 aaPredicted RBP20.46■□□□□ 0.87
PPFIA3-213ENST00000602905 GPR162Q16538 588 aa20.46■□□□□ 0.87
PPFIA3-213ENST00000602905 KSR2Q6VAB6 950 aa20.46■□□□□ 0.87
PPFIA3-213ENST00000602905 UTP14AQ9BVJ6 771 aaKnown RBP20.46■□□□□ 0.87
PPFIA3-213ENST00000602905 UBN2Q6ZU65 1347 aa20.46■□□□□ 0.87
PPFIA3-213ENST00000602905 PXDNLA1KZ92 1463 aa20.45■□□□□ 0.86
PPFIA3-213ENST00000602905 H0YIN7 160 aa20.45■□□□□ 0.86
PPFIA3-213ENST00000602905 DPEP1P16444 411 aa20.45■□□□□ 0.86
PPFIA3-213ENST00000602905 NEXNQ0ZGT2 675 aa20.45■□□□□ 0.86
PPFIA3-213ENST00000602905 SUSD4Q5VX71 490 aa20.45■□□□□ 0.86
PPFIA3-213ENST00000602905 MAP3K2Q9Y2U5 619 aa20.45■□□□□ 0.86
PPFIA3-213ENST00000602905 ANKRD31Q8N7Z5 1873 aa20.44■□□□□ 0.86
PPFIA3-213ENST00000602905 PI4KAP2A4QPH2 592 aa20.44■□□□□ 0.86
PPFIA3-213ENST00000602905 G2E3Q7L622 706 aa20.44■□□□□ 0.86
PPFIA3-213ENST00000602905 C2CD5Q86YS7 1000 aa20.44■□□□□ 0.86
PPFIA3-213ENST00000602905 CCDC24Q8N4L8 307 aa20.44■□□□□ 0.86
PPFIA3-213ENST00000602905 PI4KAP1Q8N8J0 262 aa20.44■□□□□ 0.86
PPFIA3-213ENST00000602905 MYD88Q99836 296 aa20.44■□□□□ 0.86
PPFIA3-213ENST00000602905 RNF123Q5XPI4 1314 aa20.44■□□□□ 0.86
PPFIA3-213ENST00000602905 ATP5J2-PTCD1G3V325 749 aa20.43■□□□□ 0.86
PPFIA3-213ENST00000602905 NLRP10Q86W26 655 aa20.43■□□□□ 0.86
PPFIA3-213ENST00000602905 ISCA1Q9BUE6 129 aa20.43■□□□□ 0.86
PPFIA3-213ENST00000602905 METTL22Q9BUU2 404 aaPredicted RBP20.43■□□□□ 0.86
PPFIA3-213ENST00000602905 PIM2Q9P1W9 311 aa20.43■□□□□ 0.86
PPFIA3-213ENST00000602905 KIAA1551Q9HCM1 1747 aa20.43■□□□□ 0.86
PPFIA3-213ENST00000602905 CHRNA5P30532 468 aa20.42■□□□□ 0.86
PPFIA3-213ENST00000602905 ALDH1L2Q3SY69 923 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms