RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 ARAP1Q96P48 1450 aa11.04□□□□□ -0.64
CSMD1-217ENST00000602723 SSH1Q8WYL5 1049 aa11.04□□□□□ -0.64
CSMD1-217ENST00000602723 KIF20AO95235 890 aa11.04□□□□□ -0.64
CSMD1-217ENST00000602723 MSL1Q68DK7 614 aa11.04□□□□□ -0.64
CSMD1-217ENST00000602723 ZNF692Q9BU19 519 aaPredicted RBP11.04□□□□□ -0.64
CSMD1-217ENST00000602723 NSRP1Q9H0G5 558 aaKnown RBP11.04□□□□□ -0.64
CSMD1-217ENST00000602723 MIS18AQ9NYP9 233 aa11.04□□□□□ -0.64
CSMD1-217ENST00000602723 GTF2A1P52655 376 aaPredicted RBP11.04□□□□□ -0.64
CSMD1-217ENST00000602723 FAM69CQ0P6D2 419 aa11.04□□□□□ -0.64
CSMD1-217ENST00000602723 ALDH1L2Q3SY69 923 aa11.04□□□□□ -0.64
CSMD1-217ENST00000602723 CYB5RLQ6IPT4 315 aa11.04□□□□□ -0.64
CSMD1-217ENST00000602723 ZSWIM4Q9H7M6 989 aa11.04□□□□□ -0.64
CSMD1-217ENST00000602723 ZSCAN23Q3MJ62 389 aa11.04□□□□□ -0.64
CSMD1-217ENST00000602723 CCDC40Q4G0X9 1142 aa11.04□□□□□ -0.64
CSMD1-217ENST00000602723 CUL5Q93034 780 aa11.04□□□□□ -0.64
CSMD1-217ENST00000602723 COMMD10Q9Y6G5 202 aa11.04□□□□□ -0.64
CSMD1-217ENST00000602723 CCDC96Q2M329 555 aa11.04□□□□□ -0.64
CSMD1-217ENST00000602723 MKNK2Q9HBH9 465 aa11.04□□□□□ -0.64
CSMD1-217ENST00000602723 LRPPRCP42704 1394 aaKnown RBP11.04□□□□□ -0.64
CSMD1-217ENST00000602723 RANBP6O60518 1105 aaKnown RBP11.04□□□□□ -0.64
CSMD1-217ENST00000602723 CCT2P78371 535 aaKnown RBP11.04□□□□□ -0.64
CSMD1-217ENST00000602723 CKAP4Q07065 602 aaKnown RBP11.04□□□□□ -0.64
CSMD1-217ENST00000602723 FERP16591 822 aa11.04□□□□□ -0.64
CSMD1-217ENST00000602723 A0A1W2PRG0 241 aa11.03□□□□□ -0.64
CSMD1-217ENST00000602723 TMCO5BA8MYB1 307 aa11.03□□□□□ -0.64
CSMD1-217ENST00000602723 GRIPAP1Q4V328 841 aa11.03□□□□□ -0.64
CSMD1-217ENST00000602723 SREK1Q8WXA9 508 aaKnown RBP11.03□□□□□ -0.64
CSMD1-217ENST00000602723 RBM27Q9P2N5 1060 aaKnown RBP11.03□□□□□ -0.64
CSMD1-217ENST00000602723 GJB2P29033 226 aa11.03□□□□□ -0.64
CSMD1-217ENST00000602723 GDPD2Q9HCC8 539 aa11.03□□□□□ -0.64
CSMD1-217ENST00000602723 IQCA1Q86XH1 822 aa11.03□□□□□ -0.64
CSMD1-217ENST00000602723 PYM1Q9BRP8 204 aaKnown RBP11.03□□□□□ -0.64
CSMD1-217ENST00000602723 DZIP1Q86YF9 867 aaKnown RBP11.03□□□□□ -0.64
CSMD1-217ENST00000602723 BAG4O95429 457 aaKnown RBP11.03□□□□□ -0.64
CSMD1-217ENST00000602723 DDX12PQ92771 950 aa11.03□□□□□ -0.64
CSMD1-217ENST00000602723 RNF41Q9H4P4 317 aaPredicted RBP11.03□□□□□ -0.64
CSMD1-217ENST00000602723 IGF1RP08069 1367 aa11.03□□□□□ -0.64
CSMD1-217ENST00000602723 KIF14Q15058 1648 aa11.03□□□□□ -0.64
CSMD1-217ENST00000602723 FERMT2Q96AC1 680 aa11.03□□□□□ -0.64
CSMD1-217ENST00000602723 CALML4Q96GE6 196 aa11.03□□□□□ -0.64
CSMD1-217ENST00000602723 CCDC82Q8N4S0 544 aa11.02□□□□□ -0.64
CSMD1-217ENST00000602723 CRACR2BQ8N4Y2 399 aaPredicted RBP11.02□□□□□ -0.64
CSMD1-217ENST00000602723 CCDC155Q8N6L0 562 aa11.02□□□□□ -0.64
CSMD1-217ENST00000602723 CFAP57Q96MR6 1250 aa11.02□□□□□ -0.64
CSMD1-217ENST00000602723 MAP3K12Q12852 859 aa11.02□□□□□ -0.64
CSMD1-217ENST00000602723 TBC1D9Q6ZT07 1266 aa11.02□□□□□ -0.64
CSMD1-217ENST00000602723 TSNARE1Q96NA8 513 aa11.02□□□□□ -0.65
CSMD1-217ENST00000602723 SERPINA10Q9UK55 444 aa11.02□□□□□ -0.65
CSMD1-217ENST00000602723 CAVIN4Q5BKX8 364 aa11.02□□□□□ -0.65
CSMD1-217ENST00000602723 FBF1Q8TES7 1133 aa11.02□□□□□ -0.65
CSMD1-217ENST00000602723 ANKIB1Q9P2G1 1089 aa11.02□□□□□ -0.65
CSMD1-217ENST00000602723 RASAL2Q9UJF2 1139 aa11.02□□□□□ -0.65
CSMD1-217ENST00000602723 DAPK1P53355 1430 aa11.02□□□□□ -0.65
CSMD1-217ENST00000602723 IFI16Q16666 785 aaKnown RBP11.02□□□□□ -0.65
CSMD1-217ENST00000602723 KANK3Q6NY19 840 aa11.02□□□□□ -0.65
CSMD1-217ENST00000602723 MYO1BO43795 1136 aa11.02□□□□□ -0.65
CSMD1-217ENST00000602723 ATP2C2O75185 946 aa11.02□□□□□ -0.65
CSMD1-217ENST00000602723 MCM10Q7L590 875 aa11.02□□□□□ -0.65
CSMD1-217ENST00000602723 TCP11L1Q9NUJ3 509 aa11.02□□□□□ -0.65
CSMD1-217ENST00000602723 KIF5BP33176 963 aa11.02□□□□□ -0.65
CSMD1-217ENST00000602723 RARSP54136 660 aaKnown RBP11.02□□□□□ -0.65
CSMD1-217ENST00000602723 UVSSAQ2YD98 709 aa11.02□□□□□ -0.65
CSMD1-217ENST00000602723 CC2D2AQ9P2K1 1620 aa11.02□□□□□ -0.65
CSMD1-217ENST00000602723 AMPD3Q01432 767 aa11.02□□□□□ -0.65
CSMD1-217ENST00000602723 C20orf194Q5TEA3 1177 aa11.02□□□□□ -0.65
CSMD1-217ENST00000602723 PUS7Q96PZ0 661 aaKnown RBP11.02□□□□□ -0.65
CSMD1-217ENST00000602723 STARD3NLO95772 234 aa11.01□□□□□ -0.65
CSMD1-217ENST00000602723 MCM6Q14566 821 aa11.01□□□□□ -0.65
CSMD1-217ENST00000602723 TCERG1LQ5VWI1 586 aa11.01□□□□□ -0.65
CSMD1-217ENST00000602723 EHMT1Q9H9B1 1298 aa11.01□□□□□ -0.65
CSMD1-217ENST00000602723 NCAPD3P42695 1498 aa11.01□□□□□ -0.65
CSMD1-217ENST00000602723 TTC21AQ8NDW8 1320 aa11.01□□□□□ -0.65
CSMD1-217ENST00000602723 DHX29Q7Z478 1369 aaKnown RBP11.01□□□□□ -0.65
CSMD1-217ENST00000602723 CTAGE9A4FU28 777 aa11.01□□□□□ -0.65
CSMD1-217ENST00000602723 GOLGA8AA7E2F4 631 aa11.01□□□□□ -0.65
CSMD1-217ENST00000602723 HCLS1P14317 486 aaPredicted RBP11.01□□□□□ -0.65
CSMD1-217ENST00000602723 TOP2BQ02880 1626 aa11.01□□□□□ -0.65
CSMD1-217ENST00000602723 EPRSP07814 1512 aaKnown RBP11.01□□□□□ -0.65
CSMD1-217ENST00000602723 GOLIM4O00461 696 aa11.01□□□□□ -0.65
CSMD1-217ENST00000602723 THUMPD2Q9BTF0 503 aaKnown RBP11.01□□□□□ -0.65
CSMD1-217ENST00000602723 HYPKQ9NX55 129 aa11.01□□□□□ -0.65
CSMD1-217ENST00000602723 PHF23Q9BUL5 403 aaPredicted RBP11.01□□□□□ -0.65
CSMD1-217ENST00000602723 KIF4AO95239 1232 aa11.01□□□□□ -0.65
CSMD1-217ENST00000602723 NBPF8Q3BBV2 869 aa11.01□□□□□ -0.65
CSMD1-217ENST00000602723 PROSER2Q86WR7 435 aaPredicted RBP11.01□□□□□ -0.65
CSMD1-217ENST00000602723 DDX23Q9BUQ8 820 aaKnown RBP11.01□□□□□ -0.65
CSMD1-217ENST00000602723 RSPH14Q9UHP6 348 aa11.01□□□□□ -0.65
CSMD1-217ENST00000602723 ZNF652Q9Y2D9 606 aa11.01□□□□□ -0.65
CSMD1-217ENST00000602723 IFIT3O14879 490 aaKnown RBP11.01□□□□□ -0.65
CSMD1-217ENST00000602723 IFIT5Q13325 482 aaKnown RBP11.01□□□□□ -0.65
CSMD1-217ENST00000602723 FERMT1Q9BQL6 677 aa11.01□□□□□ -0.65
CSMD1-217ENST00000602723 PRDM11Q9NQV5 511 aa11.01□□□□□ -0.65
CSMD1-217ENST00000602723 SLC5A1P13866 664 aa11□□□□□ -0.65
CSMD1-217ENST00000602723 PSMD1Q99460 953 aa11□□□□□ -0.65
CSMD1-217ENST00000602723 EXOC1Q9NV70 894 aa11□□□□□ -0.65
CSMD1-217ENST00000602723 CCDC6Q16204 474 aa11□□□□□ -0.65
CSMD1-217ENST00000602723 PLVAPQ9BX97 442 aa11□□□□□ -0.65
CSMD1-217ENST00000602723 TBC1D5Q92609 795 aa11□□□□□ -0.65
CSMD1-217ENST00000602723 PAIP2Q9BPZ3 127 aaKnown RBP11□□□□□ -0.65
CSMD1-217ENST00000602723 PCF11O94913 1555 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms