RNA–Protein interactions for RNA: ENST00000602698.5

HCG18-247, Transcript of HLA complex group 18, humanhuman

TSL 3 BASIC

Gene HCG18, Length 573 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-247ENST00000602698 MIS18AQ9NYP9 233 aa12.67□□□□□ -0.38
HCG18-247ENST00000602698 PDZRN3Q9UPQ7 1066 aa12.67□□□□□ -0.38
HCG18-247ENST00000602698 HSPA6P17066 643 aa12.66□□□□□ -0.38
HCG18-247ENST00000602698 THUMPD2Q9BTF0 503 aaKnown RBP12.66□□□□□ -0.38
HCG18-247ENST00000602698 ZNF652Q9Y2D9 606 aa12.66□□□□□ -0.38
HCG18-247ENST00000602698 WDR90Q96KV7 1748 aa12.65□□□□□ -0.38
HCG18-247ENST00000602698 ZC3H4Q9UPT8 1303 aaKnown RBP12.65□□□□□ -0.38
HCG18-247ENST00000602698 RGL2O15211 777 aa12.65□□□□□ -0.38
HCG18-247ENST00000602698 NPHP1O15259 732 aa12.65□□□□□ -0.38
HCG18-247ENST00000602698 ST5P78524 1137 aa12.65□□□□□ -0.38
HCG18-247ENST00000602698 ZNF622Q969S3 477 aaKnown RBP eCLIP12.65□□□□□ -0.38
HCG18-247ENST00000602698 KDM2BQ8NHM5 1336 aa12.64□□□□□ -0.39
HCG18-247ENST00000602698 ANKRD36CQ5JPF3 1778 aa12.64□□□□□ -0.39
HCG18-247ENST00000602698 NFKBIEO00221 500 aa12.64□□□□□ -0.39
HCG18-247ENST00000602698 TOMM70O94826 608 aa12.64□□□□□ -0.39
HCG18-247ENST00000602698 LMNB1P20700 586 aa12.64□□□□□ -0.39
HCG18-247ENST00000602698 PRELPP51888 382 aa12.64□□□□□ -0.39
HCG18-247ENST00000602698 EIF4A1P60842 406 aaKnown RBP12.64□□□□□ -0.39
HCG18-247ENST00000602698 DDX10Q13206 875 aaKnown RBP12.64□□□□□ -0.39
HCG18-247ENST00000602698 MYBBP1AQ9BQG0 1328 aaKnown RBP12.63□□□□□ -0.39
HCG18-247ENST00000602698 NBPF5PQ86XG9 351 aaPredicted RBP12.63□□□□□ -0.39
HCG18-247ENST00000602698 C21orf2O43822 256 aa12.62□□□□□ -0.39
HCG18-247ENST00000602698 SRGNP10124 158 aa12.62□□□□□ -0.39
HCG18-247ENST00000602698 STYK1Q6J9G0 422 aa12.62□□□□□ -0.39
HCG18-247ENST00000602698 CNKSR1Q969H4 720 aa12.62□□□□□ -0.39
HCG18-247ENST00000602698 NIP7Q9Y221 180 aaKnown RBP eCLIP12.62□□□□□ -0.39
HCG18-247ENST00000602698 RIPK4P57078 832 aa12.61□□□□□ -0.39
HCG18-247ENST00000602698 HLFQ16534 295 aa12.61□□□□□ -0.39
HCG18-247ENST00000602698 PRPF40BQ6NWY9 871 aaKnown RBP12.61□□□□□ -0.39
HCG18-247ENST00000602698 RBM46Q8TBY0 533 aaKnown RBP12.61□□□□□ -0.39
HCG18-247ENST00000602698 MASTLQ96GX5 879 aa12.61□□□□□ -0.39
HCG18-247ENST00000602698 TMPOP42166 694 aaKnown RBP12.6□□□□□ -0.39
HCG18-247ENST00000602698 TPTE2Q6XPS3 522 aa12.6□□□□□ -0.39
HCG18-247ENST00000602698 C16orf71Q8IYS4 520 aaPredicted RBP12.6□□□□□ -0.39
HCG18-247ENST00000602698 RRAGCQ9HB90 399 aa12.6□□□□□ -0.39
HCG18-247ENST00000602698 ZNF219Q9P2Y4 722 aaPredicted RBP12.6□□□□□ -0.39
HCG18-247ENST00000602698 TSPYL4Q9UJ04 414 aa12.6□□□□□ -0.39
HCG18-247ENST00000602698 ERBB4Q15303 1308 aa12.6□□□□□ -0.39
HCG18-247ENST00000602698 MAP3K15Q6ZN16 1313 aa12.6□□□□□ -0.39
HCG18-247ENST00000602698 LTBP3Q9NS15 1303 aa12.6□□□□□ -0.39
HCG18-247ENST00000602698 LAMB2P55268 1798 aa12.59□□□□□ -0.39
HCG18-247ENST00000602698 KLRG2A4D1S0 409 aaPredicted RBP12.59□□□□□ -0.39
HCG18-247ENST00000602698 GLTPD2A6NH11 291 aa12.59□□□□□ -0.39
HCG18-247ENST00000602698 FAM177BA6PVY3 158 aa12.59□□□□□ -0.39
HCG18-247ENST00000602698 ERVV-1B6SEH8 477 aa12.59□□□□□ -0.39
HCG18-247ENST00000602698 LMOD3Q0VAK6 560 aa12.59□□□□□ -0.39
HCG18-247ENST00000602698 KIF6Q6ZMV9 814 aa12.59□□□□□ -0.39
HCG18-247ENST00000602698 TTLL7Q6ZT98 887 aa12.59□□□□□ -0.39
HCG18-247ENST00000602698 NGEFQ8N5V2 710 aa12.59□□□□□ -0.39
HCG18-247ENST00000602698 RRP7AQ9Y3A4 280 aaKnown RBP12.59□□□□□ -0.39
HCG18-247ENST00000602698 ABCC12Q96J65 1359 aa12.58□□□□□ -0.4
HCG18-247ENST00000602698 IBTKQ9P2D0 1353 aaPredicted RBP12.58□□□□□ -0.4
HCG18-247ENST00000602698 MYL6BP14649 208 aa12.58□□□□□ -0.4
HCG18-247ENST00000602698 NPR1P16066 1061 aa12.58□□□□□ -0.4
HCG18-247ENST00000602698 APLP1P51693 650 aa12.58□□□□□ -0.4
HCG18-247ENST00000602698 SOGA3Q5TF21 947 aa12.58□□□□□ -0.4
HCG18-247ENST00000602698 CCDC146Q8IYE0 955 aa12.58□□□□□ -0.4
HCG18-247ENST00000602698 TAOK3Q9H2K8 898 aa12.58□□□□□ -0.4
HCG18-247ENST00000602698 BABAM1Q9NWV8 329 aa12.58□□□□□ -0.4
HCG18-247ENST00000602698 RIC1Q4ADV7 1423 aa12.57□□□□□ -0.4
HCG18-247ENST00000602698 FSTL1Q12841 308 aa12.57□□□□□ -0.4
HCG18-247ENST00000602698 ERFEQ4G0M1 354 aa12.57□□□□□ -0.4
HCG18-247ENST00000602698 NYXQ9GZU5 481 aa12.57□□□□□ -0.4
HCG18-247ENST00000602698 SCN4AP35499 1836 aa12.57□□□□□ -0.4
HCG18-247ENST00000602698 UBN2Q6ZU65 1347 aa12.57□□□□□ -0.4
HCG18-247ENST00000602698 PCNTO95613 3336 aa12.56□□□□□ -0.4
HCG18-247ENST00000602698 WDR43Q15061 677 aaKnown RBP eCLIP12.56□□□□□ -0.4
HCG18-247ENST00000602698 CCDC93Q567U6 631 aa12.56□□□□□ -0.4
HCG18-247ENST00000602698 LRP10Q7Z4F1 713 aa12.56□□□□□ -0.4
HCG18-247ENST00000602698 C7orf43Q8WVR3 580 aa12.56□□□□□ -0.4
HCG18-247ENST00000602698 RUNDC1Q96C34 613 aa12.56□□□□□ -0.4
HCG18-247ENST00000602698 ZBTB3Q9H5J0 574 aa12.56□□□□□ -0.4
HCG18-247ENST00000602698 VEGFAP15692 232 aaPredicted RBP12.55□□□□□ -0.4
HCG18-247ENST00000602698 EIF2S2P20042 333 aaKnown RBP12.55□□□□□ -0.4
HCG18-247ENST00000602698 GPTP24298 496 aa12.55□□□□□ -0.4
HCG18-247ENST00000602698 GTF2E1P29083 439 aaPredicted RBP12.55□□□□□ -0.4
HCG18-247ENST00000602698 PDIA6Q15084 440 aa12.55□□□□□ -0.4
HCG18-247ENST00000602698 NEUROD2Q15784 382 aa12.55□□□□□ -0.4
HCG18-247ENST00000602698 NUTM1Q86Y26 1132 aa12.55□□□□□ -0.4
HCG18-247ENST00000602698 PRKRIP1Q9H875 184 aaPredicted RBP12.55□□□□□ -0.4
HCG18-247ENST00000602698 SNED1Q8TER0 1413 aa12.54□□□□□ -0.4
HCG18-247ENST00000602698 PROSER3Q2NL68 480 aa12.54□□□□□ -0.4
HCG18-247ENST00000602698 CRY2Q49AN0 593 aa12.54□□□□□ -0.4
HCG18-247ENST00000602698 DPY19L2Q6NUT2 758 aa12.54□□□□□ -0.4
HCG18-247ENST00000602698 GIGYF2Q6Y7W6 1299 aaKnown RBP12.54□□□□□ -0.4
HCG18-247ENST00000602698 ZNF34Q8IZ26 560 aa12.54□□□□□ -0.4
HCG18-247ENST00000602698 SMC1BQ8NDV3 1235 aa12.54□□□□□ -0.4
HCG18-247ENST00000602698 ADAMTS8Q9UP79 889 aa12.54□□□□□ -0.4
HCG18-247ENST00000602698 TRIM35Q9UPQ4 493 aa12.54□□□□□ -0.4
HCG18-247ENST00000602698 POTECB2RU33 542 aa12.53□□□□□ -0.4
HCG18-247ENST00000602698 CHL1O00533 1208 aa12.53□□□□□ -0.4
HCG18-247ENST00000602698 NTSR2O95665 410 aa12.53□□□□□ -0.4
HCG18-247ENST00000602698 ANXA1P04083 346 aa12.53□□□□□ -0.4
HCG18-247ENST00000602698 ALDH1B1P30837 517 aa12.53□□□□□ -0.4
HCG18-247ENST00000602698 FKBP4Q02790 459 aaKnown RBP eCLIP12.53□□□□□ -0.4
HCG18-247ENST00000602698 SUSD4Q5VX71 490 aa12.53□□□□□ -0.4
HCG18-247ENST00000602698 OLFM4Q6UX06 510 aa12.53□□□□□ -0.4
HCG18-247ENST00000602698 DDX60Q8IY21 1712 aaKnown RBP12.53□□□□□ -0.4
HCG18-247ENST00000602698 RTKN2Q8IZC4 609 aa12.52□□□□□ -0.41
HCG18-247ENST00000602698 DNAJC5GQ8N7S2 189 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms