RNA–Protein interactions for RNA: ENST00000602150.2

SCN1B-205, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 2

Gene SCN1B, Length 3,461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-205ENST00000602150 HSP90AB1P08238 724 aaKnown RBP13.36□□□□□ -0.27
SCN1B-205ENST00000602150 PRIM1P49642 420 aaKnown RBP13.36□□□□□ -0.27
SCN1B-205ENST00000602150 CCT4P50991 539 aaKnown RBP13.36□□□□□ -0.27
SCN1B-205ENST00000602150 NUCB1Q02818 461 aa13.36□□□□□ -0.27
SCN1B-205ENST00000602150 TTLL7Q6ZT98 887 aa13.36□□□□□ -0.27
SCN1B-205ENST00000602150 ROBO1Q9Y6N7 1651 aa13.36□□□□□ -0.27
SCN1B-205ENST00000602150 SRGAP3O43295 1099 aa13.36□□□□□ -0.27
SCN1B-205ENST00000602150 MEX3CQ5U5Q3 659 aaKnown RBP13.36□□□□□ -0.27
SCN1B-205ENST00000602150 FMNL2Q96PY5 1086 aa13.36□□□□□ -0.27
SCN1B-205ENST00000602150 EXOC5O00471 708 aa13.35□□□□□ -0.27
SCN1B-205ENST00000602150 K7ELQ4 463 aaPredicted RBP13.35□□□□□ -0.27
SCN1B-205ENST00000602150 SURF6O75683 361 aaKnown RBP13.35□□□□□ -0.27
SCN1B-205ENST00000602150 NUTM1Q86Y26 1132 aa13.35□□□□□ -0.27
SCN1B-205ENST00000602150 DNAJC10Q8IXB1 793 aa13.35□□□□□ -0.27
SCN1B-205ENST00000602150 CPDO75976 1380 aa13.35□□□□□ -0.27
SCN1B-205ENST00000602150 SSFA2P28290 1259 aa13.34□□□□□ -0.27
SCN1B-205ENST00000602150 PPP1R42Q7Z4L9 355 aa13.34□□□□□ -0.27
SCN1B-205ENST00000602150 PIGBQ92521 554 aa13.34□□□□□ -0.27
SCN1B-205ENST00000602150 BAG4O95429 457 aaKnown RBP13.34□□□□□ -0.27
SCN1B-205ENST00000602150 BRPF1P55201 1214 aaPredicted RBP13.34□□□□□ -0.27
SCN1B-205ENST00000602150 SMAP1Q8IYB5 467 aaPredicted RBP13.34□□□□□ -0.27
SCN1B-205ENST00000602150 R3HCC1Q9Y3T6 440 aaKnown RBP13.34□□□□□ -0.27
SCN1B-205ENST00000602150 SNRPA1P09661 255 aaKnown RBP13.34□□□□□ -0.27
SCN1B-205ENST00000602150 ANP32BQ92688 251 aaKnown RBP13.34□□□□□ -0.27
SCN1B-205ENST00000602150 FAM13BQ9NYF5 915 aa13.34□□□□□ -0.27
SCN1B-205ENST00000602150 KCNQ2O43526 872 aa13.33□□□□□ -0.27
SCN1B-205ENST00000602150 GPTP24298 496 aa13.33□□□□□ -0.27
SCN1B-205ENST00000602150 ANKRD44Q8N8A2 993 aa13.33□□□□□ -0.27
SCN1B-205ENST00000602150 BMP2KLQ5H9B9 411 aa13.33□□□□□ -0.28
SCN1B-205ENST00000602150 PTF1AQ7RTS3 328 aa13.33□□□□□ -0.28
SCN1B-205ENST00000602150 ADCY9O60503 1353 aa13.33□□□□□ -0.28
SCN1B-205ENST00000602150 DDX49Q9Y6V7 483 aaKnown RBP13.33□□□□□ -0.28
SCN1B-205ENST00000602150 DDB1Q16531 1140 aa13.32□□□□□ -0.28
SCN1B-205ENST00000602150 UBE3BQ7Z3V4 1068 aa13.32□□□□□ -0.28
SCN1B-205ENST00000602150 MTERF4Q7Z6M4 381 aaKnown RBP13.32□□□□□ -0.28
SCN1B-205ENST00000602150 PDIA6Q15084 440 aa13.32□□□□□ -0.28
SCN1B-205ENST00000602150 DYNC1I1O14576 645 aa13.32□□□□□ -0.28
SCN1B-205ENST00000602150 BEND3Q5T5X7 828 aa13.32□□□□□ -0.28
SCN1B-205ENST00000602150 NBPF26B4DH59 902 aa13.31□□□□□ -0.28
SCN1B-205ENST00000602150 NBPF14Q5TI25 921 aa13.31□□□□□ -0.28
SCN1B-205ENST00000602150 NBPF10Q6P3W6 841 aaKnown RBP13.31□□□□□ -0.28
SCN1B-205ENST00000602150 NBPF15Q8N660 670 aa13.31□□□□□ -0.28
SCN1B-205ENST00000602150 RBSNQ9H1K0 784 aa13.31□□□□□ -0.28
SCN1B-205ENST00000602150 DDX21Q9NR30 783 aaKnown RBP eCLIP13.31□□□□□ -0.28
SCN1B-205ENST00000602150 UQCRHLA0A096LP55 91 aa13.31□□□□□ -0.28
SCN1B-205ENST00000602150 GOLGA6L22H0YM25 854 aa13.31□□□□□ -0.28
SCN1B-205ENST00000602150 UQCRHP07919 91 aa13.31□□□□□ -0.28
SCN1B-205ENST00000602150 ZSCAN23Q3MJ62 389 aa13.31□□□□□ -0.28
SCN1B-205ENST00000602150 TRIM6-TRIM34B2RNG4 842 aa13.3□□□□□ -0.28
SCN1B-205ENST00000602150 CYP2E1P05181 493 aaPredicted RBP13.3□□□□□ -0.28
SCN1B-205ENST00000602150 GNAI3P08754 354 aa13.3□□□□□ -0.28
SCN1B-205ENST00000602150 RILPL2Q969X0 211 aa13.3□□□□□ -0.28
SCN1B-205ENST00000602150 OVOS2A0A0G2JMS6 1433 aa13.3□□□□□ -0.28
SCN1B-205ENST00000602150 MCM5P33992 734 aa13.3□□□□□ -0.28
SCN1B-205ENST00000602150 HSPA1LP34931 641 aa13.3□□□□□ -0.28
SCN1B-205ENST00000602150 KSR2Q6VAB6 950 aa13.3□□□□□ -0.28
SCN1B-205ENST00000602150 ANKRD13DQ6ZTN6 518 aa13.3□□□□□ -0.28
SCN1B-205ENST00000602150 CHMP4BQ9H444 224 aaKnown RBP13.3□□□□□ -0.28
SCN1B-205ENST00000602150 FOXD4L1Q9NU39 408 aa13.3□□□□□ -0.28
SCN1B-205ENST00000602150 TBC1D2BQ9UPU7 963 aa13.3□□□□□ -0.28
SCN1B-205ENST00000602150 SUCLG2Q96I99 432 aa13.3□□□□□ -0.28
SCN1B-205ENST00000602150 LMBRD1Q9NUN5 540 aa13.3□□□□□ -0.28
SCN1B-205ENST00000602150 ZKSCAN5Q9Y2L8 839 aa13.3□□□□□ -0.28
SCN1B-205ENST00000602150 HMMRO75330 724 aa13.29□□□□□ -0.28
SCN1B-205ENST00000602150 SYNE4Q8N205 404 aa13.29□□□□□ -0.28
SCN1B-205ENST00000602150 ATP10DQ9P241 1426 aa13.29□□□□□ -0.28
SCN1B-205ENST00000602150 NEXNQ0ZGT2 675 aa13.29□□□□□ -0.28
SCN1B-205ENST00000602150 HYPKQ9NX55 129 aa13.29□□□□□ -0.28
SCN1B-205ENST00000602150 COL18A1P39060 1754 aa13.29□□□□□ -0.28
SCN1B-205ENST00000602150 DDX58O95786 925 aaKnown RBP13.29□□□□□ -0.28
SCN1B-205ENST00000602150 IGKV5-2P06315 115 aa13.29□□□□□ -0.28
SCN1B-205ENST00000602150 SOS1Q07889 1333 aaPredicted RBP13.29□□□□□ -0.28
SCN1B-205ENST00000602150 GCC1Q96CN9 775 aa13.29□□□□□ -0.28
SCN1B-205ENST00000602150 BICC1Q9H694 974 aaKnown RBP13.29□□□□□ -0.28
SCN1B-205ENST00000602150 DCTPP1Q9H773 170 aa13.29□□□□□ -0.28
SCN1B-205ENST00000602150 CSPP1Q1MSJ5 1256 aa13.28□□□□□ -0.28
SCN1B-205ENST00000602150 EPHA10Q5JZY3 1008 aa13.28□□□□□ -0.28
SCN1B-205ENST00000602150 RPAP2Q8IXW5 612 aaPredicted RBP13.28□□□□□ -0.28
SCN1B-205ENST00000602150 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.28□□□□□ -0.28
SCN1B-205ENST00000602150 A0A087WZG4 1122 aa13.27□□□□□ -0.28
SCN1B-205ENST00000602150 GSPT1P15170 499 aaKnown RBP13.27□□□□□ -0.28
SCN1B-205ENST00000602150 TBC1D9Q6ZT07 1266 aa13.27□□□□□ -0.28
SCN1B-205ENST00000602150 PLEKHM2Q8IWE5 1019 aa13.27□□□□□ -0.28
SCN1B-205ENST00000602150 ATG3Q9NT62 314 aa13.27□□□□□ -0.28
SCN1B-205ENST00000602150 NDUFB9Q9Y6M9 179 aa13.27□□□□□ -0.28
SCN1B-205ENST00000602150 USP54Q70EL1 1684 aa13.27□□□□□ -0.29
SCN1B-205ENST00000602150 MARCH10Q8NA82 808 aaPredicted RBP13.27□□□□□ -0.29
SCN1B-205ENST00000602150 FAM208AQ9UK61 1670 aaKnown RBP13.26□□□□□ -0.29
SCN1B-205ENST00000602150 CAVIN1Q6NZI2 390 aaKnown RBP13.26□□□□□ -0.29
SCN1B-205ENST00000602150 ZBTB1Q9Y2K1 713 aa13.26□□□□□ -0.29
SCN1B-205ENST00000602150 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.26□□□□□ -0.29
SCN1B-205ENST00000602150 GRM8O00222 908 aa13.26□□□□□ -0.29
SCN1B-205ENST00000602150 UTP14CQ5TAP6 766 aaKnown RBP13.26□□□□□ -0.29
SCN1B-205ENST00000602150 SLC4A9Q96Q91 983 aa13.26□□□□□ -0.29
SCN1B-205ENST00000602150 BABAM1Q9NWV8 329 aa13.26□□□□□ -0.29
SCN1B-205ENST00000602150 CCDC8Q9H0W5 538 aaPredicted RBP13.25□□□□□ -0.29
SCN1B-205ENST00000602150 USP21Q9UK80 565 aa13.25□□□□□ -0.29
SCN1B-205ENST00000602150 LTBP4Q8N2S1 1624 aa13.25□□□□□ -0.29
SCN1B-205ENST00000602150 ATP8B2P98198 1209 aa13.25□□□□□ -0.29
SCN1B-205ENST00000602150 MCTP1Q6DN14 999 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms