RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 ERVV-1B6SEH8 477 aa21.73■■□□□ 1.07
SSBP4-213ENST00000602088 HLFQ16534 295 aa21.73■■□□□ 1.07
SSBP4-213ENST00000602088 PROSER3Q2NL68 480 aa21.73■■□□□ 1.07
SSBP4-213ENST00000602088 N4BP2Q86UW6 1770 aaPredicted RBP21.73■■□□□ 1.07
SSBP4-213ENST00000602088 IL16Q14005 1332 aa21.73■■□□□ 1.07
SSBP4-213ENST00000602088 DPEP1P16444 411 aa21.72■■□□□ 1.07
SSBP4-213ENST00000602088 KCNA3P22001 575 aa21.72■■□□□ 1.07
SSBP4-213ENST00000602088 HDGFL1Q5TGJ6 251 aa21.72■■□□□ 1.07
SSBP4-213ENST00000602088 SALL2Q9Y467 1007 aaPredicted RBP21.72■■□□□ 1.07
SSBP4-213ENST00000602088 MAP3K15Q6ZN16 1313 aa21.72■■□□□ 1.07
SSBP4-213ENST00000602088 CCER2I3L3R5 266 aa21.71■■□□□ 1.07
SSBP4-213ENST00000602088 ANXA1P04083 346 aa21.71■■□□□ 1.07
SSBP4-213ENST00000602088 KIF6Q6ZMV9 814 aa21.71■■□□□ 1.07
SSBP4-213ENST00000602088 DDX21Q9NR30 783 aaKnown RBP eCLIP21.71■■□□□ 1.07
SSBP4-213ENST00000602088 GRIN3BO60391 1043 aa21.7■■□□□ 1.06
SSBP4-213ENST00000602088 PRR5LQ6MZQ0 368 aa21.7■■□□□ 1.06
SSBP4-213ENST00000602088 WDR63Q8IWG1 891 aa21.7■■□□□ 1.06
SSBP4-213ENST00000602088 C8orf58Q8NAV2 365 aa21.7■■□□□ 1.06
SSBP4-213ENST00000602088 WWC3Q9ULE0 1092 aa21.7■■□□□ 1.06
SSBP4-213ENST00000602088 ELL2O00472 640 aaPredicted RBP21.69■■□□□ 1.06
SSBP4-213ENST00000602088 TSR2Q969E8 191 aaKnown RBP21.69■■□□□ 1.06
SSBP4-213ENST00000602088 CHPF2Q9P2E5 772 aa21.69■■□□□ 1.06
SSBP4-213ENST00000602088 NIP7Q9Y221 180 aaKnown RBP eCLIP21.69■■□□□ 1.06
SSBP4-213ENST00000602088 CHRNA5P30532 468 aa21.68■■□□□ 1.06
SSBP4-213ENST00000602088 DIEXFQ68CQ4 756 aaKnown RBP21.68■■□□□ 1.06
SSBP4-213ENST00000602088 ZBTB3Q9H5J0 574 aa21.68■■□□□ 1.06
SSBP4-213ENST00000602088 DBF4Q9UBU7 674 aaPredicted RBP21.68■■□□□ 1.06
SSBP4-213ENST00000602088 NUP98P52948 1817 aa21.68■■□□□ 1.06
SSBP4-213ENST00000602088 COPS6Q7L5N1 327 aa21.67■■□□□ 1.06
SSBP4-213ENST00000602088 CNBD1Q8NA66 436 aa21.67■■□□□ 1.06
SSBP4-213ENST00000602088 GIGYF2Q6Y7W6 1299 aaKnown RBP21.66■■□□□ 1.06
SSBP4-213ENST00000602088 NBPF5PQ86XG9 351 aaPredicted RBP21.66■■□□□ 1.06
SSBP4-213ENST00000602088 CCDC24Q8N4L8 307 aa21.66■■□□□ 1.06
SSBP4-213ENST00000602088 XAGE3Q8WTP9 111 aa21.66■■□□□ 1.06
SSBP4-213ENST00000602088 BRIP1Q9BX63 1249 aa21.66■■□□□ 1.06
SSBP4-213ENST00000602088 PIM2Q9P1W9 311 aa21.66■■□□□ 1.06
SSBP4-213ENST00000602088 BRCA1P38398 1863 aaKnown RBP21.66■■□□□ 1.06
SSBP4-213ENST00000602088 ATP10DQ9P241 1426 aa21.65■■□□□ 1.06
SSBP4-213ENST00000602088 AIMP1Q12904 312 aaKnown RBP21.65■■□□□ 1.06
SSBP4-213ENST00000602088 TSPYL6Q8N831 410 aa21.65■■□□□ 1.06
SSBP4-213ENST00000602088 CHD4Q14839 1912 aa21.65■■□□□ 1.06
SSBP4-213ENST00000602088 NPHP1O15259 732 aa21.64■■□□□ 1.05
SSBP4-213ENST00000602088 TPTE2Q6XPS3 522 aa21.64■■□□□ 1.05
SSBP4-213ENST00000602088 HYPKQ9NX55 129 aa21.64■■□□□ 1.05
SSBP4-213ENST00000602088 BCS1LQ9Y276 419 aa21.64■■□□□ 1.05
SSBP4-213ENST00000602088 ANKRD31Q8N7Z5 1873 aa21.63■■□□□ 1.05
SSBP4-213ENST00000602088 YY1P25490 414 aa21.63■■□□□ 1.05
SSBP4-213ENST00000602088 PDE6BP35913 854 aa21.63■■□□□ 1.05
SSBP4-213ENST00000602088 ST5P78524 1137 aa21.63■■□□□ 1.05
SSBP4-213ENST00000602088 ZNF34Q8IZ26 560 aa21.63■■□□□ 1.05
SSBP4-213ENST00000602088 CHMP4AQ9BY43 222 aa21.63■■□□□ 1.05
SSBP4-213ENST00000602088 FAM177BA6PVY3 158 aa21.62■■□□□ 1.05
SSBP4-213ENST00000602088 H0YIN7 160 aa21.62■■□□□ 1.05
SSBP4-213ENST00000602088 C2CD5Q86YS7 1000 aa21.62■■□□□ 1.05
SSBP4-213ENST00000602088 PDZRN3Q9UPQ7 1066 aa21.62■■□□□ 1.05
SSBP4-213ENST00000602088 ZNF521Q96K83 1311 aa21.61■■□□□ 1.05
SSBP4-213ENST00000602088 FANCIQ9NVI1 1328 aa21.61■■□□□ 1.05
SSBP4-213ENST00000602088 GPTP24298 496 aa21.61■■□□□ 1.05
SSBP4-213ENST00000602088 DALRD3Q5D0E6 543 aaKnown RBP21.61■■□□□ 1.05
SSBP4-213ENST00000602088 SPINK5Q9NQ38 1064 aaPredicted RBP21.61■■□□□ 1.05
SSBP4-213ENST00000602088 UBN2Q6ZU65 1347 aa21.6■■□□□ 1.05
SSBP4-213ENST00000602088 CCDC30Q5VVM6 783 aa21.6■■□□□ 1.05
SSBP4-213ENST00000602088 MIER1Q8N108 512 aa21.6■■□□□ 1.05
SSBP4-213ENST00000602088 DLEC1Q9Y238 1755 aa21.59■■□□□ 1.05
SSBP4-213ENST00000602088 TWISTNBQ3B726 338 aaPredicted RBP21.59■■□□□ 1.05
SSBP4-213ENST00000602088 ANKRD13DQ6ZTN6 518 aa21.59■■□□□ 1.05
SSBP4-213ENST00000602088 PLBD2Q8NHP8 589 aa21.59■■□□□ 1.05
SSBP4-213ENST00000602088 NYXQ9GZU5 481 aa21.59■■□□□ 1.05
SSBP4-213ENST00000602088 GOLGA2Q08379 1002 aa21.58■■□□□ 1.05
SSBP4-213ENST00000602088 HSP90AB3PQ58FF7 597 aa21.58■■□□□ 1.05
SSBP4-213ENST00000602088 SUSD4Q5VX71 490 aa21.58■■□□□ 1.05
SSBP4-213ENST00000602088 PHAXQ9H814 394 aaKnown RBP21.58■■□□□ 1.05
SSBP4-213ENST00000602088 IBTKQ9P2D0 1353 aaPredicted RBP21.58■■□□□ 1.04
SSBP4-213ENST00000602088 ARFGEF1Q9Y6D6 1849 aa21.57■■□□□ 1.04
SSBP4-213ENST00000602088 KLRG2A4D1S0 409 aaPredicted RBP21.57■■□□□ 1.04
SSBP4-213ENST00000602088 GTF2E1P29083 439 aaPredicted RBP21.57■■□□□ 1.04
SSBP4-213ENST00000602088 TCIRG1Q13488 830 aa21.57■■□□□ 1.04
SSBP4-213ENST00000602088 PARP10Q53GL7 1025 aa21.57■■□□□ 1.04
SSBP4-213ENST00000602088 TTLL6Q8N841 843 aa21.57■■□□□ 1.04
SSBP4-213ENST00000602088 MYH16Q9H6N6 1097 aa21.57■■□□□ 1.04
SSBP4-213ENST00000602088 SRGNP10124 158 aa21.56■■□□□ 1.04
SSBP4-213ENST00000602088 EXOSC9Q06265 439 aaKnown RBP21.56■■□□□ 1.04
SSBP4-213ENST00000602088 NTSR2O95665 410 aa21.55■■□□□ 1.04
SSBP4-213ENST00000602088 ERFEQ4G0M1 354 aa21.55■■□□□ 1.04
SSBP4-213ENST00000602088 PPP1R42Q7Z4L9 355 aa21.55■■□□□ 1.04
SSBP4-213ENST00000602088 NUTM1Q86Y26 1132 aa21.55■■□□□ 1.04
SSBP4-213ENST00000602088 ANKRD36CQ5JPF3 1778 aa21.55■■□□□ 1.04
SSBP4-213ENST00000602088 COL11A2P13942 1736 aaPredicted RBP21.55■■□□□ 1.04
SSBP4-213ENST00000602088 ARHGAP27Q6ZUM4 889 aa21.54■■□□□ 1.04
SSBP4-213ENST00000602088 NLRP10Q86W26 655 aa21.54■■□□□ 1.04
SSBP4-213ENST00000602088 ZNF622Q969S3 477 aaKnown RBP eCLIP21.54■■□□□ 1.04
SSBP4-213ENST00000602088 ABCC12Q96J65 1359 aa21.53■■□□□ 1.04
SSBP4-213ENST00000602088 TCERG1O14776 1098 aaKnown RBP21.53■■□□□ 1.04
SSBP4-213ENST00000602088 VAMP4O75379 141 aa21.53■■□□□ 1.04
SSBP4-213ENST00000602088 STYK1Q6J9G0 422 aa21.53■■□□□ 1.04
SSBP4-213ENST00000602088 MASTLQ96GX5 879 aa21.53■■□□□ 1.04
SSBP4-213ENST00000602088 STK31Q9BXU1 1019 aa21.53■■□□□ 1.04
SSBP4-213ENST00000602088 RIC3Q7Z5B4 369 aa21.52■■□□□ 1.04
SSBP4-213ENST00000602088 ISCA1Q9BUE6 129 aa21.52■■□□□ 1.04
SSBP4-213ENST00000602088 UTP14AQ9BVJ6 771 aaKnown RBP21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms