RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 CWC25Q9NXE8 425 aaPredicted RBP14.03□□□□□ -0.16
SHANK2-218ENST00000601538 CTAGE9A4FU28 777 aa14.03□□□□□ -0.16
SHANK2-218ENST00000601538 ZBTB17Q13105 803 aa14.03□□□□□ -0.16
SHANK2-218ENST00000601538 GAS2L2Q8NHY3 880 aa14.03□□□□□ -0.16
SHANK2-218ENST00000601538 TRERF1Q96PN7 1200 aa14.03□□□□□ -0.16
SHANK2-218ENST00000601538 MATR3P43243 847 aaKnown RBP eCLIP14.02□□□□□ -0.161e-6■■■■□ 21.4
SHANK2-218ENST00000601538 JAKMIP2Q96AA8 810 aa14.02□□□□□ -0.16
SHANK2-218ENST00000601538 PABPN1LA6NDY0 278 aaKnown RBP14.02□□□□□ -0.16
SHANK2-218ENST00000601538 FAM114A2Q9NRY5 505 aa14.02□□□□□ -0.16
SHANK2-218ENST00000601538 PTPN23Q9H3S7 1636 aa14.02□□□□□ -0.16
SHANK2-218ENST00000601538 ADCY5O95622 1261 aa14.02□□□□□ -0.17
SHANK2-218ENST00000601538 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.02□□□□□ -0.172e-6■■□□□ 14.1
SHANK2-218ENST00000601538 TCHHQ07283 1943 aa14.02□□□□□ -0.17
SHANK2-218ENST00000601538 NAA25Q14CX7 972 aa14.02□□□□□ -0.17
SHANK2-218ENST00000601538 MAP7D1Q3KQU3 841 aa14.02□□□□□ -0.17
SHANK2-218ENST00000601538 AP1ARQ63HQ0 302 aa14.01□□□□□ -0.17
SHANK2-218ENST00000601538 CEP128Q6ZU80 1094 aa14.01□□□□□ -0.17
SHANK2-218ENST00000601538 ERO1AQ96HE7 468 aa14.01□□□□□ -0.17
SHANK2-218ENST00000601538 FEZ2Q9UHY8 353 aaPredicted RBP14.01□□□□□ -0.17
SHANK2-218ENST00000601538 CASTP20810 708 aaKnown RBP14.01□□□□□ -0.17
SHANK2-218ENST00000601538 PPFIBP2Q8ND30 876 aa14.01□□□□□ -0.17
SHANK2-218ENST00000601538 PIBF1Q8WXW3 757 aa14.01□□□□□ -0.17
SHANK2-218ENST00000601538 TBC1D2Q9BYX2 928 aa14.01□□□□□ -0.17
SHANK2-218ENST00000601538 ATP2A1O14983 1001 aa14.01□□□□□ -0.17
SHANK2-218ENST00000601538 LUC7L3O95232 432 aaKnown RBP14.01□□□□□ -0.17
SHANK2-218ENST00000601538 ALDH3A1P30838 453 aa14.01□□□□□ -0.17
SHANK2-218ENST00000601538 GBP1P32455 592 aa14.01□□□□□ -0.17
SHANK2-218ENST00000601538 PPP4R3AQ6IN85 833 aa14.01□□□□□ -0.17
SHANK2-218ENST00000601538 CCDC129Q6ZRS4 1044 aa14.01□□□□□ -0.17
SHANK2-218ENST00000601538 NBPF11Q86T75 865 aa14.01□□□□□ -0.17
SHANK2-218ENST00000601538 KIF14Q15058 1648 aa14.01□□□□□ -0.17
SHANK2-218ENST00000601538 SETDB1Q15047 1291 aa14.01□□□□□ -0.17
SHANK2-218ENST00000601538 AEBP2Q6ZN18 517 aaPredicted RBP14.01□□□□□ -0.17
SHANK2-218ENST00000601538 GOLGA1Q92805 767 aa14.01□□□□□ -0.17
SHANK2-218ENST00000601538 NUP133Q8WUM0 1156 aa14.01□□□□□ -0.17
SHANK2-218ENST00000601538 NECTIN2Q92692 538 aa14.01□□□□□ -0.17
SHANK2-218ENST00000601538 STMN2Q93045 179 aa14.01□□□□□ -0.17
SHANK2-218ENST00000601538 SCLT1Q96NL6 688 aa14.01□□□□□ -0.17
SHANK2-218ENST00000601538 SEC63Q9UGP8 760 aaKnown RBP14.01□□□□□ -0.17
SHANK2-218ENST00000601538 AMPD3Q01432 767 aa14□□□□□ -0.17
SHANK2-218ENST00000601538 MVPQ14764 893 aaKnown RBP14□□□□□ -0.17
SHANK2-218ENST00000601538 ZSCAN23Q3MJ62 389 aa14□□□□□ -0.17
SHANK2-218ENST00000601538 CCDC114Q96M63 670 aa14□□□□□ -0.17
SHANK2-218ENST00000601538 RAD50Q92878 1312 aa14□□□□□ -0.17
SHANK2-218ENST00000601538 STK3Q13188 491 aa14□□□□□ -0.17
SHANK2-218ENST00000601538 SAMD15Q9P1V8 674 aa14□□□□□ -0.17
SHANK2-218ENST00000601538 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14□□□□□ -0.173e-6■■□□□ 13.6
SHANK2-218ENST00000601538 AQRO60306 1485 aaKnown RBP eCLIP14□□□□□ -0.173e-7■■■■■ 29.7
SHANK2-218ENST00000601538 GCC2Q8IWJ2 1684 aa14□□□□□ -0.17
SHANK2-218ENST00000601538 SPDYE4A6NLX3 237 aa14□□□□□ -0.17
SHANK2-218ENST00000601538 ZBTB16Q05516 673 aa14□□□□□ -0.17
SHANK2-218ENST00000601538 TSNAXIP1Q2TAA8 658 aa14□□□□□ -0.17
SHANK2-218ENST00000601538 SSX2IPQ9Y2D8 614 aa14□□□□□ -0.17
SHANK2-218ENST00000601538 BMP2KLQ5H9B9 411 aa13.99□□□□□ -0.17
SHANK2-218ENST00000601538 MPNDQ8N594 471 aa13.99□□□□□ -0.17
SHANK2-218ENST00000601538 STMN1P16949 149 aa13.99□□□□□ -0.17
SHANK2-218ENST00000601538 CAMK4Q16566 473 aa13.99□□□□□ -0.17
SHANK2-218ENST00000601538 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.99□□□□□ -0.17
SHANK2-218ENST00000601538 JAKMIP1Q96N16 626 aaKnown RBP13.99□□□□□ -0.17
SHANK2-218ENST00000601538 TTC21AQ8NDW8 1320 aa13.99□□□□□ -0.17
SHANK2-218ENST00000601538 ZNF853P0CG23 659 aa13.99□□□□□ -0.17
SHANK2-218ENST00000601538 TMEM266Q2M3C6 531 aa13.99□□□□□ -0.17
SHANK2-218ENST00000601538 FAM200AQ8TCP9 573 aa13.99□□□□□ -0.17
SHANK2-218ENST00000601538 SLMAPQ14BN4 828 aa13.99□□□□□ -0.17
SHANK2-218ENST00000601538 CCDC174Q6PII3 467 aa13.99□□□□□ -0.17
SHANK2-218ENST00000601538 HDXQ7Z353 690 aa13.99□□□□□ -0.17
SHANK2-218ENST00000601538 CCDC12Q8WUD4 166 aaPredicted RBP13.99□□□□□ -0.17
SHANK2-218ENST00000601538 NCOA2Q15596 1464 aa13.99□□□□□ -0.17
SHANK2-218ENST00000601538 PAXIP1Q6ZW49 1069 aaPredicted RBP13.99□□□□□ -0.17
SHANK2-218ENST00000601538 RPAINQ86UA6 219 aa13.99□□□□□ -0.17
SHANK2-218ENST00000601538 ATP5DP30049 168 aa13.99□□□□□ -0.17
SHANK2-218ENST00000601538 CTTNBP2Q8WZ74 1663 aa13.99□□□□□ -0.17
SHANK2-218ENST00000601538 CTAGE15A4D2H0 777 aa13.99□□□□□ -0.17
SHANK2-218ENST00000601538 CTAGE8P0CG41 777 aa13.99□□□□□ -0.17
SHANK2-218ENST00000601538 NBPF8Q3BBV2 869 aa13.99□□□□□ -0.17
SHANK2-218ENST00000601538 CTAGE6Q86UF2 777 aa13.99□□□□□ -0.17
SHANK2-218ENST00000601538 CTAGE4Q8IX94 777 aa13.99□□□□□ -0.17
SHANK2-218ENST00000601538 VCXQ9H320 206 aa13.99□□□□□ -0.17
SHANK2-218ENST00000601538 STXBP4Q6ZWJ1 553 aa13.98□□□□□ -0.17
SHANK2-218ENST00000601538 RPUSD2Q8IZ73 545 aaKnown RBP13.98□□□□□ -0.17
SHANK2-218ENST00000601538 TRIM7Q9C029 511 aa13.98□□□□□ -0.17
SHANK2-218ENST00000601538 SPATS2LQ9NUQ6 558 aaKnown RBP13.98□□□□□ -0.17
SHANK2-218ENST00000601538 COMMD10Q9Y6G5 202 aa13.98□□□□□ -0.17
SHANK2-218ENST00000601538 SSBP05455 408 aaKnown RBP eCLIP13.98□□□□□ -0.17
SHANK2-218ENST00000601538 TDRD12Q587J7 1177 aaKnown RBP13.98□□□□□ -0.17
SHANK2-218ENST00000601538 SMC5Q8IY18 1101 aa13.98□□□□□ -0.17
SHANK2-218ENST00000601538 RPGRIP1LQ68CZ1 1315 aa13.98□□□□□ -0.17
SHANK2-218ENST00000601538 ATRIPQ8WXE1 791 aa13.98□□□□□ -0.17
SHANK2-218ENST00000601538 RABGAP1Q9Y3P9 1069 aa13.98□□□□□ -0.17
SHANK2-218ENST00000601538 ABCC11Q96J66 1382 aa13.98□□□□□ -0.17
SHANK2-218ENST00000601538 CASQ2O14958 399 aaPredicted RBP13.98□□□□□ -0.17
SHANK2-218ENST00000601538 RALGAPBQ86X10 1494 aa13.98□□□□□ -0.17
SHANK2-218ENST00000601538 ATP8B1O43520 1251 aa13.98□□□□□ -0.17
SHANK2-218ENST00000601538 RAPGEF4Q8WZA2 1011 aa13.98□□□□□ -0.17
SHANK2-218ENST00000601538 ATF7IPQ6VMQ6 1270 aa13.98□□□□□ -0.17
SHANK2-218ENST00000601538 SAMD1Q6SPF0 538 aaPredicted RBP13.97□□□□□ -0.17
SHANK2-218ENST00000601538 ZNF445P59923 1031 aa13.97□□□□□ -0.17
SHANK2-218ENST00000601538 GNG11P61952 73 aa13.97□□□□□ -0.17
SHANK2-218ENST00000601538 MYO1BO43795 1136 aa13.97□□□□□ -0.17
SHANK2-218ENST00000601538 SLC8A1P32418 973 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms