RNA–Protein interactions for RNA: ENST00000601009.1

FARP1-232, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-232ENST00000601009 PIP4K2AP48426 406 aaPredicted RBP12.08□□□□□ -0.48
FARP1-232ENST00000601009 APLP1P51693 650 aa12.08□□□□□ -0.48
FARP1-232ENST00000601009 RASSF7Q02833 373 aa12.08□□□□□ -0.48
FARP1-232ENST00000601009 STYK1Q6J9G0 422 aa12.08□□□□□ -0.48
FARP1-232ENST00000601009 KIF6Q6ZMV9 814 aa12.08□□□□□ -0.48
FARP1-232ENST00000601009 RBM46Q8TBY0 533 aaKnown RBP12.08□□□□□ -0.48
FARP1-232ENST00000601009 MASTLQ96GX5 879 aa12.08□□□□□ -0.48
FARP1-232ENST00000601009 NMRK2Q9NPI5 230 aa12.08□□□□□ -0.48
FARP1-232ENST00000601009 MIS18AQ9NYP9 233 aa12.08□□□□□ -0.48
FARP1-232ENST00000601009 NIP7Q9Y221 180 aaKnown RBP eCLIP12.08□□□□□ -0.48
FARP1-232ENST00000601009 COL11A2P13942 1736 aaPredicted RBP12.07□□□□□ -0.48
FARP1-232ENST00000601009 GTF2E1P29083 439 aaPredicted RBP12.07□□□□□ -0.48
FARP1-232ENST00000601009 EIF4A1P60842 406 aaKnown RBP12.07□□□□□ -0.48
FARP1-232ENST00000601009 DDX10Q13206 875 aaKnown RBP12.07□□□□□ -0.48
FARP1-232ENST00000601009 NYXQ9GZU5 481 aa12.07□□□□□ -0.48
FARP1-232ENST00000601009 BABAM1Q9NWV8 329 aa12.07□□□□□ -0.48
FARP1-232ENST00000601009 TSPYL4Q9UJ04 414 aa12.07□□□□□ -0.48
FARP1-232ENST00000601009 ERBB4Q15303 1308 aa12.07□□□□□ -0.48
FARP1-232ENST00000601009 ARFGEF2Q9Y6D5 1785 aa12.06□□□□□ -0.48
FARP1-232ENST00000601009 NBPF26B4DH59 902 aa12.06□□□□□ -0.48
FARP1-232ENST00000601009 ERVV-1B6SEH8 477 aa12.06□□□□□ -0.48
FARP1-232ENST00000601009 C21orf2O43822 256 aa12.06□□□□□ -0.48
FARP1-232ENST00000601009 SRGNP10124 158 aa12.06□□□□□ -0.48
FARP1-232ENST00000601009 RIPK4P57078 832 aa12.06□□□□□ -0.48
FARP1-232ENST00000601009 FSTL1Q12841 308 aa12.06□□□□□ -0.48
FARP1-232ENST00000601009 WDR43Q15061 677 aaKnown RBP eCLIP12.06□□□□□ -0.48
FARP1-232ENST00000601009 NBPF10Q6P3W6 841 aaKnown RBP12.06□□□□□ -0.48
FARP1-232ENST00000601009 NBPF15Q8N660 670 aa12.06□□□□□ -0.48
FARP1-232ENST00000601009 CCDC88AQ3V6T2 1871 aa12.06□□□□□ -0.48
FARP1-232ENST00000601009 TIAM2Q8IVF5 1701 aa12.06□□□□□ -0.48
FARP1-232ENST00000601009 NFKBIEO00221 500 aa12.05□□□□□ -0.48
FARP1-232ENST00000601009 NPR1P16066 1061 aa12.05□□□□□ -0.48
FARP1-232ENST00000601009 DPY19L2Q6NUT2 758 aa12.05□□□□□ -0.48
FARP1-232ENST00000601009 PRPF40BQ6NWY9 871 aaKnown RBP12.05□□□□□ -0.48
FARP1-232ENST00000601009 CCDC24Q8N4L8 307 aa12.05□□□□□ -0.48
FARP1-232ENST00000601009 THUMPD2Q9BTF0 503 aaKnown RBP12.05□□□□□ -0.48
FARP1-232ENST00000601009 TAOK3Q9H2K8 898 aa12.05□□□□□ -0.48
FARP1-232ENST00000601009 LTBP3Q9NS15 1303 aa12.05□□□□□ -0.48
FARP1-232ENST00000601009 CACNA1SQ13698 1873 aa12.04□□□□□ -0.48
FARP1-232ENST00000601009 FER1L6Q2WGJ9 1857 aa12.04□□□□□ -0.48
FARP1-232ENST00000601009 DICER1Q9UPY3 1922 aaKnown RBP12.04□□□□□ -0.48
FARP1-232ENST00000601009 GLTPD2A6NH11 291 aa12.04□□□□□ -0.48
FARP1-232ENST00000601009 RRAGCQ9HB90 399 aa12.04□□□□□ -0.48
FARP1-232ENST00000601009 ZNF219Q9P2Y4 722 aaPredicted RBP12.04□□□□□ -0.48
FARP1-232ENST00000601009 RRP7AQ9Y3A4 280 aaKnown RBP12.04□□□□□ -0.48
FARP1-232ENST00000601009 MAP3K15Q6ZN16 1313 aa12.04□□□□□ -0.48
FARP1-232ENST00000601009 MYL6BP14649 208 aa12.03□□□□□ -0.48
FARP1-232ENST00000601009 VEGFAP15692 232 aaPredicted RBP12.03□□□□□ -0.48
FARP1-232ENST00000601009 ALDH1B1P30837 517 aa12.03□□□□□ -0.48
FARP1-232ENST00000601009 TMPOP42166 694 aaKnown RBP12.03□□□□□ -0.48
FARP1-232ENST00000601009 ERFEQ4G0M1 354 aa12.03□□□□□ -0.48
FARP1-232ENST00000601009 CCDC93Q567U6 631 aa12.03□□□□□ -0.48
FARP1-232ENST00000601009 NGEFQ8N5V2 710 aa12.03□□□□□ -0.48
FARP1-232ENST00000601009 SMC1BQ8NDV3 1235 aa12.03□□□□□ -0.48
FARP1-232ENST00000601009 IBTKQ9P2D0 1353 aaPredicted RBP12.03□□□□□ -0.48
FARP1-232ENST00000601009 NUP98P52948 1817 aa12.02□□□□□ -0.48
FARP1-232ENST00000601009 KLRG2A4D1S0 409 aaPredicted RBP12.02□□□□□ -0.49
FARP1-232ENST00000601009 FAM177BA6PVY3 158 aa12.02□□□□□ -0.49
FARP1-232ENST00000601009 HLFQ16534 295 aa12.02□□□□□ -0.49
FARP1-232ENST00000601009 RUNDC1Q96C34 613 aa12.02□□□□□ -0.49
FARP1-232ENST00000601009 SLX4Q8IY92 1834 aa12.02□□□□□ -0.49
FARP1-232ENST00000601009 PPP1R42Q7Z4L9 355 aa12.01□□□□□ -0.49
FARP1-232ENST00000601009 RTKN2Q8IZC4 609 aa12.01□□□□□ -0.49
FARP1-232ENST00000601009 EIF2S2P20042 333 aaKnown RBP12□□□□□ -0.49
FARP1-232ENST00000601009 PRELPP51888 382 aa12□□□□□ -0.49
FARP1-232ENST00000601009 PARP10Q53GL7 1025 aa12□□□□□ -0.49
FARP1-232ENST00000601009 TTLL7Q6ZT98 887 aa12□□□□□ -0.49
FARP1-232ENST00000601009 RPGRQ92834 1020 aaKnown RBP12□□□□□ -0.49
FARP1-232ENST00000601009 ZBTB3Q9H5J0 574 aa12□□□□□ -0.49
FARP1-232ENST00000601009 RIC1Q4ADV7 1423 aa12□□□□□ -0.49
FARP1-232ENST00000601009 WDR90Q96KV7 1748 aa12□□□□□ -0.49
FARP1-232ENST00000601009 FKBP4Q02790 459 aaKnown RBP eCLIP11.99□□□□□ -0.49
FARP1-232ENST00000601009 NEUROD2Q15784 382 aa11.99□□□□□ -0.49
FARP1-232ENST00000601009 GRIPAP1Q4V328 841 aa11.99□□□□□ -0.49
FARP1-232ENST00000601009 HSP90AB3PQ58FF7 597 aa11.99□□□□□ -0.49
FARP1-232ENST00000601009 CC2D2BQ6DHV5 1058 aa11.99□□□□□ -0.49
FARP1-232ENST00000601009 GIGYF2Q6Y7W6 1299 aaKnown RBP11.99□□□□□ -0.49
FARP1-232ENST00000601009 CCDC146Q8IYE0 955 aa11.99□□□□□ -0.49
FARP1-232ENST00000601009 TMX4Q9H1E5 349 aaPredicted RBP11.99□□□□□ -0.49
FARP1-232ENST00000601009 RNF123Q5XPI4 1314 aa11.98□□□□□ -0.49
FARP1-232ENST00000601009 IQCA1LA6NCM1 817 aa11.98□□□□□ -0.49
FARP1-232ENST00000601009 GPTP24298 496 aa11.98□□□□□ -0.49
FARP1-232ENST00000601009 RBM17Q96I25 401 aaKnown RBP11.98□□□□□ -0.49
FARP1-232ENST00000601009 PRKRIP1Q9H875 184 aaPredicted RBP11.98□□□□□ -0.49
FARP1-232ENST00000601009 HOXB7P09629 217 aa11.97□□□□□ -0.49
FARP1-232ENST00000601009 CALD1Q05682 793 aaKnown RBP11.97□□□□□ -0.49
FARP1-232ENST00000601009 CRY2Q49AN0 593 aa11.97□□□□□ -0.49
FARP1-232ENST00000601009 NUTM1Q86Y26 1132 aa11.97□□□□□ -0.49
FARP1-232ENST00000601009 ZNF34Q8IZ26 560 aa11.97□□□□□ -0.49
FARP1-232ENST00000601009 C7orf43Q8WVR3 580 aa11.97□□□□□ -0.49
FARP1-232ENST00000601009 LAS1LQ9Y4W2 734 aaKnown RBP11.97□□□□□ -0.49
FARP1-232ENST00000601009 ABCC12Q96J65 1359 aa11.96□□□□□ -0.49
FARP1-232ENST00000601009 UBN2Q6ZU65 1347 aa11.96□□□□□ -0.49
FARP1-232ENST00000601009 CHL1O00533 1208 aa11.96□□□□□ -0.49
FARP1-232ENST00000601009 NLRP3Q96P20 1036 aa11.96□□□□□ -0.49
FARP1-232ENST00000601009 UTP14AQ9BVJ6 771 aaKnown RBP11.96□□□□□ -0.49
FARP1-232ENST00000601009 DDX21Q9NR30 783 aaKnown RBP eCLIP11.96□□□□□ -0.49
FARP1-232ENST00000601009 ADAMTS8Q9UP79 889 aa11.96□□□□□ -0.49
FARP1-232ENST00000601009 NTSR2O95665 410 aa11.95□□□□□ -0.5
FARP1-232ENST00000601009 HOXA10P31260 410 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms