RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 USP42Q9H9J4 1324 aaKnown RBP15.07■□□□□ 0
CHMP2A-207ENST00000600804 CACNA1FO60840 1977 aa15.07■□□□□ 0
CHMP2A-207ENST00000600804 KCNQ3O43525 872 aa15.06■□□□□ 0
CHMP2A-207ENST00000600804 PTCD1O75127 700 aaKnown RBP15.06■□□□□ 0
CHMP2A-207ENST00000600804 CRKLP46109 303 aaKnown RBP15.06■□□□□ 0
CHMP2A-207ENST00000600804 C9orf131Q5VYM1 1079 aa15.06■□□□□ 0
CHMP2A-207ENST00000600804 TSR2Q969E8 191 aaKnown RBP15.06■□□□□ 0
CHMP2A-207ENST00000600804 ZNF496Q96IT1 587 aaPredicted RBP15.06■□□□□ 0
CHMP2A-207ENST00000600804 CHMP4AQ9BY43 222 aa15.06■□□□□ 0
CHMP2A-207ENST00000600804 PARP3Q9Y6F1 533 aa15.06■□□□□ 0
CHMP2A-207ENST00000600804 CHRNA5P30532 468 aa15.05■□□□□ -0
CHMP2A-207ENST00000600804 INTS5Q6P9B9 1019 aaKnown RBP15.05■□□□□ -0
CHMP2A-207ENST00000600804 ZNF428Q96B54 188 aa15.05■□□□□ -0
CHMP2A-207ENST00000600804 TEX13AQ9BXU3 409 aaPredicted RBP15.05■□□□□ -0
CHMP2A-207ENST00000600804 FER1L6Q2WGJ9 1857 aa15.05■□□□□ -0
CHMP2A-207ENST00000600804 SNRPA1P09661 255 aaKnown RBP15.04■□□□□ -0
CHMP2A-207ENST00000600804 PRELPP51888 382 aa15.04■□□□□ -0
CHMP2A-207ENST00000600804 LAMB4A4D0S4 1761 aa15.03■□□□□ -0
CHMP2A-207ENST00000600804 SCN7AQ01118 1682 aa15.03■□□□□ -0
CHMP2A-207ENST00000600804 POLRMTO00411 1230 aaKnown RBP15.03■□□□□ -0
CHMP2A-207ENST00000600804 TM4SF1P30408 202 aa15.03■□□□□ -0
CHMP2A-207ENST00000600804 RBM46Q8TBY0 533 aaKnown RBP15.03■□□□□ -0
CHMP2A-207ENST00000600804 EXOSC9Q06265 439 aaKnown RBP15.02■□□□□ -0
CHMP2A-207ENST00000600804 PIM2Q9P1W9 311 aa15.02■□□□□ -0
CHMP2A-207ENST00000600804 ARFGEF2Q9Y6D5 1785 aa15.01□□□□□ -0.01
CHMP2A-207ENST00000600804 DNAJC10Q8IXB1 793 aa15.01□□□□□ -0.01
CHMP2A-207ENST00000600804 C8orf58Q8NAV2 365 aa15.01□□□□□ -0.01
CHMP2A-207ENST00000600804 CARMIL3Q8ND23 1372 aa15□□□□□ -0.01
CHMP2A-207ENST00000600804 ERBB4Q15303 1308 aa15□□□□□ -0.01
CHMP2A-207ENST00000600804 VAMP4O75379 141 aa15□□□□□ -0.01
CHMP2A-207ENST00000600804 TWISTNBQ3B726 338 aaPredicted RBP15□□□□□ -0.01
CHMP2A-207ENST00000600804 DALRD3Q5D0E6 543 aaKnown RBP15□□□□□ -0.01
CHMP2A-207ENST00000600804 RNF181Q9P0P0 153 aa15□□□□□ -0.01
CHMP2A-207ENST00000600804 BCORQ6W2J9 1755 aa15□□□□□ -0.01
CHMP2A-207ENST00000600804 STARD3NLO95772 234 aa14.99□□□□□ -0.01
CHMP2A-207ENST00000600804 RASSF7Q02833 373 aa14.99□□□□□ -0.01
CHMP2A-207ENST00000600804 USPL1Q5W0Q7 1092 aa14.99□□□□□ -0.01
CHMP2A-207ENST00000600804 TSPYL6Q8N831 410 aa14.99□□□□□ -0.01
CHMP2A-207ENST00000600804 BCL2L12Q9HB09 334 aa14.99□□□□□ -0.01
CHMP2A-207ENST00000600804 RRAGCQ9HB90 399 aa14.99□□□□□ -0.01
CHMP2A-207ENST00000600804 KRT24Q2M2I5 525 aa14.98□□□□□ -0.01
CHMP2A-207ENST00000600804 JMYQ8N9B5 988 aa14.98□□□□□ -0.01
CHMP2A-207ENST00000600804 KLRG1Q96E93 195 aa14.98□□□□□ -0.01
CHMP2A-207ENST00000600804 COL15A1P39059 1388 aa14.98□□□□□ -0.01
CHMP2A-207ENST00000600804 CYP19A1P11511 503 aaPredicted RBP14.97□□□□□ -0.01
CHMP2A-207ENST00000600804 BRPF1P55201 1214 aaPredicted RBP14.97□□□□□ -0.01
CHMP2A-207ENST00000600804 ZBTB1Q9Y2K1 713 aa14.97□□□□□ -0.01
CHMP2A-207ENST00000600804 USP16Q9Y5T5 823 aa14.97□□□□□ -0.01
CHMP2A-207ENST00000600804 SLX4Q8IY92 1834 aa14.96□□□□□ -0.01
CHMP2A-207ENST00000600804 FSTL1Q12841 308 aa14.96□□□□□ -0.01
CHMP2A-207ENST00000600804 NFIXQ14938 502 aa14.96□□□□□ -0.01
CHMP2A-207ENST00000600804 ALDH1L2Q3SY69 923 aa14.96□□□□□ -0.01
CHMP2A-207ENST00000600804 COL13A1Q5TAT6 717 aaPredicted RBP14.96□□□□□ -0.01
CHMP2A-207ENST00000600804 CCDC30Q5VVM6 783 aa14.96□□□□□ -0.01
CHMP2A-207ENST00000600804 KDM2BQ8NHM5 1336 aa14.95□□□□□ -0.02
CHMP2A-207ENST00000600804 PRAMEF22A3QJZ6 481 aa14.95□□□□□ -0.02
CHMP2A-207ENST00000600804 HDGFL1Q5TGJ6 251 aa14.95□□□□□ -0.02
CHMP2A-207ENST00000600804 ELL2O00472 640 aaPredicted RBP14.94□□□□□ -0.02
CHMP2A-207ENST00000600804 DDX21Q9NR30 783 aaKnown RBP eCLIP14.94□□□□□ -0.02
CHMP2A-207ENST00000600804 NARFQ9UHQ1 456 aa14.94□□□□□ -0.02
CHMP2A-207ENST00000600804 NFKBIEO00221 500 aa14.93□□□□□ -0.02
CHMP2A-207ENST00000600804 RARSP54136 660 aaKnown RBP14.93□□□□□ -0.02
CHMP2A-207ENST00000600804 C16orf71Q8IYS4 520 aaPredicted RBP14.93□□□□□ -0.02
CHMP2A-207ENST00000600804 DBF4Q9UBU7 674 aaPredicted RBP14.93□□□□□ -0.02
CHMP2A-207ENST00000600804 ZPR1O75312 459 aa14.92□□□□□ -0.02
CHMP2A-207ENST00000600804 EIF2S2P20042 333 aaKnown RBP14.92□□□□□ -0.02
CHMP2A-207ENST00000600804 PDIA6Q15084 440 aa14.92□□□□□ -0.02
CHMP2A-207ENST00000600804 LRP10Q7Z4F1 713 aa14.92□□□□□ -0.02
CHMP2A-207ENST00000600804 POTECB2RU33 542 aa14.91□□□□□ -0.02
CHMP2A-207ENST00000600804 SERPINB2P05120 415 aa14.91□□□□□ -0.02
CHMP2A-207ENST00000600804 IL6STP40189 918 aaPredicted RBP14.91□□□□□ -0.02
CHMP2A-207ENST00000600804 SSH1Q8WYL5 1049 aa14.91□□□□□ -0.02
CHMP2A-207ENST00000600804 STK31Q9BXU1 1019 aa14.91□□□□□ -0.02
CHMP2A-207ENST00000600804 HYPKQ9NX55 129 aa14.91□□□□□ -0.02
CHMP2A-207ENST00000600804 ZC3H4Q9UPT8 1303 aaKnown RBP14.91□□□□□ -0.02
CHMP2A-207ENST00000600804 NBPF26B4DH59 902 aa14.9□□□□□ -0.02
CHMP2A-207ENST00000600804 RGL2O15211 777 aa14.9□□□□□ -0.02
CHMP2A-207ENST00000600804 A1BGP04217 495 aa14.9□□□□□ -0.02
CHMP2A-207ENST00000600804 EIF5P55010 431 aaKnown RBP14.9□□□□□ -0.02
CHMP2A-207ENST00000600804 NBPF10Q6P3W6 841 aaKnown RBP14.9□□□□□ -0.02
CHMP2A-207ENST00000600804 NBPF15Q8N660 670 aa14.9□□□□□ -0.02
CHMP2A-207ENST00000600804 CHPF2Q9P2E5 772 aa14.9□□□□□ -0.02
CHMP2A-207ENST00000600804 RCAN3Q9UKA8 241 aa14.9□□□□□ -0.02
CHMP2A-207ENST00000600804 GLTPD2A6NH11 291 aa14.89□□□□□ -0.03
CHMP2A-207ENST00000600804 LMNB1P20700 586 aa14.89□□□□□ -0.03
CHMP2A-207ENST00000600804 MRPL50Q8N5N7 158 aaKnown RBP14.89□□□□□ -0.03
CHMP2A-207ENST00000600804 SMC1BQ8NDV3 1235 aa14.89□□□□□ -0.03
CHMP2A-207ENST00000600804 SLC4A2P04920 1241 aa14.88□□□□□ -0.03
CHMP2A-207ENST00000600804 C2CD5Q86YS7 1000 aa14.88□□□□□ -0.03
CHMP2A-207ENST00000600804 SCN4AP35499 1836 aa14.87□□□□□ -0.03
CHMP2A-207ENST00000600804 A0A087WZG4 1122 aa14.87□□□□□ -0.03
CHMP2A-207ENST00000600804 CENPBP07199 599 aaPredicted RBP14.87□□□□□ -0.03
CHMP2A-207ENST00000600804 CANXP27824 592 aaKnown RBP14.87□□□□□ -0.03
CHMP2A-207ENST00000600804 PROSER3Q2NL68 480 aa14.87□□□□□ -0.03
CHMP2A-207ENST00000600804 TBC1D9BQ66K14 1250 aa14.87□□□□□ -0.03
CHMP2A-207ENST00000600804 CCDC24Q8N4L8 307 aa14.87□□□□□ -0.03
CHMP2A-207ENST00000600804 TTLL6Q8N841 843 aa14.87□□□□□ -0.03
CHMP2A-207ENST00000600804 ARHGAP45Q92619 1136 aa14.87□□□□□ -0.03
CHMP2A-207ENST00000600804 SMC4Q9NTJ3 1288 aa14.87□□□□□ -0.03
CHMP2A-207ENST00000600804 KIF16BQ96L93 1317 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms