RNA–Protein interactions for RNA: ENST00000600791.5

SHKBP1-226, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-226ENST00000600791 RGL2O15211 777 aa19.83■□□□□ 0.77
SHKBP1-226ENST00000600791 HSPA6P17066 643 aa19.83■□□□□ 0.77
SHKBP1-226ENST00000600791 PRELPP51888 382 aa19.83■□□□□ 0.77
SHKBP1-226ENST00000600791 CACNA1SQ13698 1873 aa19.83■□□□□ 0.76
SHKBP1-226ENST00000600791 ARFGEF2Q9Y6D5 1785 aa19.83■□□□□ 0.76
SHKBP1-226ENST00000600791 TNRC6CQ9HCJ0 1690 aaKnown RBP19.82■□□□□ 0.76
SHKBP1-226ENST00000600791 NFKBIEO00221 500 aa19.82■□□□□ 0.76
SHKBP1-226ENST00000600791 LMNB1P20700 586 aa19.82■□□□□ 0.76
SHKBP1-226ENST00000600791 NBPF5PQ86XG9 351 aaPredicted RBP19.82■□□□□ 0.76
SHKBP1-226ENST00000600791 NIP7Q9Y221 180 aaKnown RBP eCLIP19.82■□□□□ 0.76
SHKBP1-226ENST00000600791 CCDC88AQ3V6T2 1871 aa19.82■□□□□ 0.76
SHKBP1-226ENST00000600791 KDM2BQ8NHM5 1336 aa19.81■□□□□ 0.76
SHKBP1-226ENST00000600791 ZC3H4Q9UPT8 1303 aaKnown RBP19.81■□□□□ 0.76
SHKBP1-226ENST00000600791 TOMM70O94826 608 aa19.81■□□□□ 0.76
SHKBP1-226ENST00000600791 RIPK4P57078 832 aa19.81■□□□□ 0.76
SHKBP1-226ENST00000600791 FER1L6Q2WGJ9 1857 aa19.81■□□□□ 0.76
SHKBP1-226ENST00000600791 C21orf2O43822 256 aa19.8■□□□□ 0.76
SHKBP1-226ENST00000600791 SRGNP10124 158 aa19.8■□□□□ 0.76
SHKBP1-226ENST00000600791 HLFQ16534 295 aa19.8■□□□□ 0.76
SHKBP1-226ENST00000600791 TSPYL4Q9UJ04 414 aa19.8■□□□□ 0.76
SHKBP1-226ENST00000600791 SLX4Q8IY92 1834 aa19.8■□□□□ 0.76
SHKBP1-226ENST00000600791 TMPOP42166 694 aaKnown RBP19.79■□□□□ 0.76
SHKBP1-226ENST00000600791 STYK1Q6J9G0 422 aa19.79■□□□□ 0.76
SHKBP1-226ENST00000600791 ZNF219Q9P2Y4 722 aaPredicted RBP19.79■□□□□ 0.76
SHKBP1-226ENST00000600791 NUP98P52948 1817 aa19.79■□□□□ 0.76
SHKBP1-226ENST00000600791 PRPF40BQ6NWY9 871 aaKnown RBP19.78■□□□□ 0.76
SHKBP1-226ENST00000600791 NGEFQ8N5V2 710 aa19.78■□□□□ 0.76
SHKBP1-226ENST00000600791 CNKSR1Q969H4 720 aa19.78■□□□□ 0.76
SHKBP1-226ENST00000600791 MASTLQ96GX5 879 aa19.78■□□□□ 0.76
SHKBP1-226ENST00000600791 RRP7AQ9Y3A4 280 aaKnown RBP19.78■□□□□ 0.76
SHKBP1-226ENST00000600791 FAM177BA6PVY3 158 aa19.77■□□□□ 0.76
SHKBP1-226ENST00000600791 MYL6BP14649 208 aa19.77■□□□□ 0.76
SHKBP1-226ENST00000600791 LMOD3Q0VAK6 560 aa19.77■□□□□ 0.76
SHKBP1-226ENST00000600791 TPTE2Q6XPS3 522 aa19.77■□□□□ 0.76
SHKBP1-226ENST00000600791 CCDC146Q8IYE0 955 aa19.77■□□□□ 0.76
SHKBP1-226ENST00000600791 MAP3K15Q6ZN16 1313 aa19.76■□□□□ 0.75
SHKBP1-226ENST00000600791 ERVV-1B6SEH8 477 aa19.76■□□□□ 0.75
SHKBP1-226ENST00000600791 TTLL7Q6ZT98 887 aa19.76■□□□□ 0.75
SHKBP1-226ENST00000600791 DICER1Q9UPY3 1922 aaKnown RBP19.76■□□□□ 0.75
SHKBP1-226ENST00000600791 ERBB4Q15303 1308 aa19.76■□□□□ 0.75
SHKBP1-226ENST00000600791 KLRG2A4D1S0 409 aaPredicted RBP19.75■□□□□ 0.75
SHKBP1-226ENST00000600791 WDR43Q15061 677 aaKnown RBP eCLIP19.75■□□□□ 0.75
SHKBP1-226ENST00000600791 KIF6Q6ZMV9 814 aa19.75■□□□□ 0.75
SHKBP1-226ENST00000600791 C16orf71Q8IYS4 520 aaPredicted RBP19.75■□□□□ 0.75
SHKBP1-226ENST00000600791 RRAGCQ9HB90 399 aa19.75■□□□□ 0.75
SHKBP1-226ENST00000600791 RBM46Q8TBY0 533 aaKnown RBP19.74■□□□□ 0.75
SHKBP1-226ENST00000600791 BABAM1Q9NWV8 329 aa19.74■□□□□ 0.75
SHKBP1-226ENST00000600791 LTBP3Q9NS15 1303 aa19.74■□□□□ 0.75
SHKBP1-226ENST00000600791 ABCC12Q96J65 1359 aa19.73■□□□□ 0.75
SHKBP1-226ENST00000600791 GLTPD2A6NH11 291 aa19.73■□□□□ 0.75
SHKBP1-226ENST00000600791 NPR1P16066 1061 aa19.73■□□□□ 0.75
SHKBP1-226ENST00000600791 NEUROD2Q15784 382 aa19.73■□□□□ 0.75
SHKBP1-226ENST00000600791 RUNDC1Q96C34 613 aa19.73■□□□□ 0.75
SHKBP1-226ENST00000600791 TAOK3Q9H2K8 898 aa19.73■□□□□ 0.75
SHKBP1-226ENST00000600791 ZBTB3Q9H5J0 574 aa19.73■□□□□ 0.75
SHKBP1-226ENST00000600791 PRKRIP1Q9H875 184 aaPredicted RBP19.73■□□□□ 0.75
SHKBP1-226ENST00000600791 SOGA3Q5TF21 947 aa19.72■□□□□ 0.75
SHKBP1-226ENST00000600791 LRP10Q7Z4F1 713 aa19.72■□□□□ 0.75
SHKBP1-226ENST00000600791 ADAMTS8Q9UP79 889 aa19.72■□□□□ 0.75
SHKBP1-226ENST00000600791 UBN2Q6ZU65 1347 aa19.72■□□□□ 0.75
SHKBP1-226ENST00000600791 EIF2S2P20042 333 aaKnown RBP19.71■□□□□ 0.75
SHKBP1-226ENST00000600791 GTF2E1P29083 439 aaPredicted RBP19.71■□□□□ 0.75
SHKBP1-226ENST00000600791 PDIA6Q15084 440 aa19.71■□□□□ 0.75
SHKBP1-226ENST00000600791 C7orf43Q8WVR3 580 aa19.71■□□□□ 0.75
SHKBP1-226ENST00000600791 NYXQ9GZU5 481 aa19.71■□□□□ 0.75
SHKBP1-226ENST00000600791 TRIM35Q9UPQ4 493 aa19.71■□□□□ 0.75
SHKBP1-226ENST00000600791 IBTKQ9P2D0 1353 aaPredicted RBP19.7■□□□□ 0.74
SHKBP1-226ENST00000600791 GPTP24298 496 aa19.7■□□□□ 0.74
SHKBP1-226ENST00000600791 APLP1P51693 650 aa19.7■□□□□ 0.74
SHKBP1-226ENST00000600791 ERFEQ4G0M1 354 aa19.7■□□□□ 0.74
SHKBP1-226ENST00000600791 NUTM1Q86Y26 1132 aa19.7■□□□□ 0.74
SHKBP1-226ENST00000600791 WDR90Q96KV7 1748 aa19.69■□□□□ 0.74
SHKBP1-226ENST00000600791 PROSER3Q2NL68 480 aa19.69■□□□□ 0.74
SHKBP1-226ENST00000600791 CCDC93Q567U6 631 aa19.69■□□□□ 0.74
SHKBP1-226ENST00000600791 GIGYF2Q6Y7W6 1299 aaKnown RBP19.69■□□□□ 0.74
SHKBP1-226ENST00000600791 RIC1Q4ADV7 1423 aa19.68■□□□□ 0.74
SHKBP1-226ENST00000600791 CHL1O00533 1208 aa19.68■□□□□ 0.74
SHKBP1-226ENST00000600791 ANXA1P04083 346 aa19.68■□□□□ 0.74
SHKBP1-226ENST00000600791 FSTL1Q12841 308 aa19.68■□□□□ 0.74
SHKBP1-226ENST00000600791 CRY2Q49AN0 593 aa19.68■□□□□ 0.74
SHKBP1-226ENST00000600791 ZNF34Q8IZ26 560 aa19.68■□□□□ 0.74
SHKBP1-226ENST00000600791 VEGFAP15692 232 aaPredicted RBP19.67■□□□□ 0.74
SHKBP1-226ENST00000600791 KRT24Q2M2I5 525 aa19.67■□□□□ 0.74
SHKBP1-226ENST00000600791 SUSD4Q5VX71 490 aa19.67■□□□□ 0.74
SHKBP1-226ENST00000600791 OLFM4Q6UX06 510 aa19.67■□□□□ 0.74
SHKBP1-226ENST00000600791 ANKRD36CQ5JPF3 1778 aa19.66■□□□□ 0.74
SHKBP1-226ENST00000600791 NTSR2O95665 410 aa19.66■□□□□ 0.74
SHKBP1-226ENST00000600791 DPY19L2Q6NUT2 758 aa19.66■□□□□ 0.74
SHKBP1-226ENST00000600791 NECTIN2Q92692 538 aa19.66■□□□□ 0.74
SHKBP1-226ENST00000600791 LAS1LQ9Y4W2 734 aaKnown RBP19.66■□□□□ 0.74
SHKBP1-226ENST00000600791 ALDH1B1P30837 517 aa19.65■□□□□ 0.74
SHKBP1-226ENST00000600791 POTECB2RU33 542 aa19.64■□□□□ 0.73
SHKBP1-226ENST00000600791 FKBP4Q02790 459 aaKnown RBP eCLIP19.64■□□□□ 0.73
SHKBP1-226ENST00000600791 SMC1BQ8NDV3 1235 aa19.64■□□□□ 0.73
SHKBP1-226ENST00000600791 SNED1Q8TER0 1413 aa19.64■□□□□ 0.73
SHKBP1-226ENST00000600791 PARP10Q53GL7 1025 aa19.63■□□□□ 0.73
SHKBP1-226ENST00000600791 RTKN2Q8IZC4 609 aa19.63■□□□□ 0.73
SHKBP1-226ENST00000600791 COPS6Q7L5N1 327 aa19.62■□□□□ 0.73
SHKBP1-226ENST00000600791 PPP1R42Q7Z4L9 355 aa19.62■□□□□ 0.73
SHKBP1-226ENST00000600791 XAGE3Q8WTP9 111 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms