RNA–Protein interactions for RNA: ENST00000600778.3

SOX2-OT-233, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 762 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-233ENST00000600778 RRP7AQ9Y3A4 280 aaKnown RBP15.23■□□□□ 0.03
SOX2-OT-233ENST00000600778 MYL6BP14649 208 aa15.22■□□□□ 0.03
SOX2-OT-233ENST00000600778 RASSF7Q02833 373 aa15.22■□□□□ 0.03
SOX2-OT-233ENST00000600778 HLFQ16534 295 aa15.22■□□□□ 0.03
SOX2-OT-233ENST00000600778 NBPF5PQ86XG9 351 aaPredicted RBP15.22■□□□□ 0.03
SOX2-OT-233ENST00000600778 PRKRIP1Q9H875 184 aaPredicted RBP15.22■□□□□ 0.03
SOX2-OT-233ENST00000600778 NIP7Q9Y221 180 aaKnown RBP eCLIP15.22■□□□□ 0.03
SOX2-OT-233ENST00000600778 ANKRD31Q8N7Z5 1873 aa15.22■□□□□ 0.03
SOX2-OT-233ENST00000600778 LAMB4A4D0S4 1761 aa15.21■□□□□ 0.03
SOX2-OT-233ENST00000600778 DLEC1Q9Y238 1755 aa15.21■□□□□ 0.03
SOX2-OT-233ENST00000600778 FAM177BA6PVY3 158 aa15.21■□□□□ 0.03
SOX2-OT-233ENST00000600778 KIF3CO14782 793 aa15.21■□□□□ 0.03
SOX2-OT-233ENST00000600778 LMOD3Q0VAK6 560 aa15.21■□□□□ 0.03
SOX2-OT-233ENST00000600778 RUNDC1Q96C34 613 aa15.21■□□□□ 0.03
SOX2-OT-233ENST00000600778 ZNF219Q9P2Y4 722 aaPredicted RBP15.21■□□□□ 0.03
SOX2-OT-233ENST00000600778 ADAMTS8Q9UP79 889 aa15.21■□□□□ 0.03
SOX2-OT-233ENST00000600778 C21orf2O43822 256 aa15.19■□□□□ 0.02
SOX2-OT-233ENST00000600778 TPTE2Q6XPS3 522 aa15.19■□□□□ 0.02
SOX2-OT-233ENST00000600778 TTLL7Q6ZT98 887 aa15.19■□□□□ 0.02
SOX2-OT-233ENST00000600778 RGL2O15211 777 aa15.18■□□□□ 0.02
SOX2-OT-233ENST00000600778 EIF2S2P20042 333 aaKnown RBP15.18■□□□□ 0.02
SOX2-OT-233ENST00000600778 PRELPP51888 382 aa15.18■□□□□ 0.02
SOX2-OT-233ENST00000600778 KIF6Q6ZMV9 814 aa15.18■□□□□ 0.02
SOX2-OT-233ENST00000600778 NMRK2Q9NPI5 230 aa15.18■□□□□ 0.02
SOX2-OT-233ENST00000600778 BABAM1Q9NWV8 329 aa15.18■□□□□ 0.02
SOX2-OT-233ENST00000600778 MAP3K15Q6ZN16 1313 aa15.17■□□□□ 0.02
SOX2-OT-233ENST00000600778 COL11A2P13942 1736 aaPredicted RBP15.17■□□□□ 0.02
SOX2-OT-233ENST00000600778 SBF1O95248 1867 aa15.17■□□□□ 0.02
SOX2-OT-233ENST00000600778 ERVV-1B6SEH8 477 aa15.17■□□□□ 0.02
SOX2-OT-233ENST00000600778 NFKBIEO00221 500 aa15.17■□□□□ 0.02
SOX2-OT-233ENST00000600778 SRGNP10124 158 aa15.17■□□□□ 0.02
SOX2-OT-233ENST00000600778 LMNB1P20700 586 aa15.17■□□□□ 0.02
SOX2-OT-233ENST00000600778 STYK1Q6J9G0 422 aa15.17■□□□□ 0.02
SOX2-OT-233ENST00000600778 CNKSR1Q969H4 720 aa15.17■□□□□ 0.02
SOX2-OT-233ENST00000600778 MASTLQ96GX5 879 aa15.17■□□□□ 0.02
SOX2-OT-233ENST00000600778 ZBTB3Q9H5J0 574 aa15.17■□□□□ 0.02
SOX2-OT-233ENST00000600778 TRIM35Q9UPQ4 493 aa15.17■□□□□ 0.02
SOX2-OT-233ENST00000600778 LAS1LQ9Y4W2 734 aaKnown RBP15.17■□□□□ 0.02
SOX2-OT-233ENST00000600778 CEP350Q5VT06 3117 aa15.17■□□□□ 0.02
SOX2-OT-233ENST00000600778 GTF2E1P29083 439 aaPredicted RBP15.16■□□□□ 0.02
SOX2-OT-233ENST00000600778 KDM2BQ8NHM5 1336 aa15.16■□□□□ 0.02
SOX2-OT-233ENST00000600778 PRPF40BQ6NWY9 871 aaKnown RBP15.15■□□□□ 0.02
SOX2-OT-233ENST00000600778 NECTIN2Q92692 538 aa15.15■□□□□ 0.02
SOX2-OT-233ENST00000600778 RRAGCQ9HB90 399 aa15.15■□□□□ 0.02
SOX2-OT-233ENST00000600778 ERBB4Q15303 1308 aa15.15■□□□□ 0.02
SOX2-OT-233ENST00000600778 CHL1O00533 1208 aa15.14■□□□□ 0.01
SOX2-OT-233ENST00000600778 TOMM70O94826 608 aa15.14■□□□□ 0.01
SOX2-OT-233ENST00000600778 ANXA1P04083 346 aa15.14■□□□□ 0.01
SOX2-OT-233ENST00000600778 NPR1P16066 1061 aa15.14■□□□□ 0.01
SOX2-OT-233ENST00000600778 GPTP24298 496 aa15.14■□□□□ 0.01
SOX2-OT-233ENST00000600778 PDIA6Q15084 440 aa15.14■□□□□ 0.01
SOX2-OT-233ENST00000600778 NYXQ9GZU5 481 aa15.14■□□□□ 0.01
SOX2-OT-233ENST00000600778 KLRG2A4D1S0 409 aaPredicted RBP15.13■□□□□ 0.01
SOX2-OT-233ENST00000600778 HSPA6P17066 643 aa15.13■□□□□ 0.01
SOX2-OT-233ENST00000600778 CACNA1SQ13698 1873 aa15.13■□□□□ 0.01
SOX2-OT-233ENST00000600778 KRT24Q2M2I5 525 aa15.13■□□□□ 0.01
SOX2-OT-233ENST00000600778 NUTM1Q86Y26 1132 aa15.13■□□□□ 0.01
SOX2-OT-233ENST00000600778 C16orf71Q8IYS4 520 aaPredicted RBP15.13■□□□□ 0.01
SOX2-OT-233ENST00000600778 NUP98P52948 1817 aa15.13■□□□□ 0.01
SOX2-OT-233ENST00000600778 SLX4Q8IY92 1834 aa15.13■□□□□ 0.01
SOX2-OT-233ENST00000600778 PROSER3Q2NL68 480 aa15.12■□□□□ 0.01
SOX2-OT-233ENST00000600778 ERFEQ4G0M1 354 aa15.12■□□□□ 0.01
SOX2-OT-233ENST00000600778 GIGYF2Q6Y7W6 1299 aaKnown RBP15.12■□□□□ 0.01
SOX2-OT-233ENST00000600778 LRP10Q7Z4F1 713 aa15.12■□□□□ 0.01
SOX2-OT-233ENST00000600778 UBN2Q6ZU65 1347 aa15.12■□□□□ 0.01
SOX2-OT-233ENST00000600778 ZC3H4Q9UPT8 1303 aaKnown RBP15.12■□□□□ 0.01
SOX2-OT-233ENST00000600778 CCDC88AQ3V6T2 1871 aa15.12■□□□□ 0.01
SOX2-OT-233ENST00000600778 SOGA3Q5TF21 947 aa15.11■□□□□ 0.01
SOX2-OT-233ENST00000600778 SUSD4Q5VX71 490 aa15.11■□□□□ 0.01
SOX2-OT-233ENST00000600778 ZNF34Q8IZ26 560 aa15.11■□□□□ 0.01
SOX2-OT-233ENST00000600778 GLTPD2A6NH11 291 aa15.1■□□□□ 0.01
SOX2-OT-233ENST00000600778 APAF1O14727 1248 aa15.1■□□□□ 0.01
SOX2-OT-233ENST00000600778 ALDH1B1P30837 517 aa15.1■□□□□ 0.01
SOX2-OT-233ENST00000600778 AIMP1Q12904 312 aaKnown RBP15.1■□□□□ 0.01
SOX2-OT-233ENST00000600778 COPS6Q7L5N1 327 aa15.1■□□□□ 0.01
SOX2-OT-233ENST00000600778 C7orf43Q8WVR3 580 aa15.1■□□□□ 0.01
SOX2-OT-233ENST00000600778 TAOK3Q9H2K8 898 aa15.1■□□□□ 0.01
SOX2-OT-233ENST00000600778 FER1L6Q2WGJ9 1857 aa15.1■□□□□ 0.01
SOX2-OT-233ENST00000600778 ABCC12Q96J65 1359 aa15.1■□□□□ 0.01
SOX2-OT-233ENST00000600778 CCDC93Q567U6 631 aa15.09■□□□□ 0.01
SOX2-OT-233ENST00000600778 PPP1R42Q7Z4L9 355 aa15.09■□□□□ 0.01
SOX2-OT-233ENST00000600778 XAGE3Q8WTP9 111 aa15.09■□□□□ 0.01
SOX2-OT-233ENST00000600778 CFAP44Q96MT7 982 aa15.09■□□□□ 0.01
SOX2-OT-233ENST00000600778 LTBP3Q9NS15 1303 aa15.09■□□□□ 0.01
SOX2-OT-233ENST00000600778 ARFGEF2Q9Y6D5 1785 aa15.08■□□□□ 0.01
SOX2-OT-233ENST00000600778 NTSR2O95665 410 aa15.08■□□□□ 0
SOX2-OT-233ENST00000600778 CCDC184Q52MB2 194 aa15.08■□□□□ 0
SOX2-OT-233ENST00000600778 PARP10Q53GL7 1025 aa15.08■□□□□ 0
SOX2-OT-233ENST00000600778 DPY19L2Q6NUT2 758 aa15.08■□□□□ 0
SOX2-OT-233ENST00000600778 OLFM4Q6UX06 510 aa15.08■□□□□ 0
SOX2-OT-233ENST00000600778 RBM46Q8TBY0 533 aaKnown RBP15.08■□□□□ 0
SOX2-OT-233ENST00000600778 DDX21Q9NR30 783 aaKnown RBP eCLIP15.08■□□□□ 0
SOX2-OT-233ENST00000600778 TIAM2Q8IVF5 1701 aa15.08■□□□□ 0
SOX2-OT-233ENST00000600778 TNRC6CQ9HCJ0 1690 aaKnown RBP15.07■□□□□ 0
SOX2-OT-233ENST00000600778 CRY2Q49AN0 593 aa15.07■□□□□ 0
SOX2-OT-233ENST00000600778 HDGFL1Q5TGJ6 251 aa15.07■□□□□ 0
SOX2-OT-233ENST00000600778 RPGRQ92834 1020 aaKnown RBP15.07■□□□□ 0
SOX2-OT-233ENST00000600778 MBIPQ9NS73 344 aa15.07■□□□□ 0
SOX2-OT-233ENST00000600778 CHPF2Q9P2E5 772 aa15.07■□□□□ 0
SOX2-OT-233ENST00000600778 IBTKQ9P2D0 1353 aaPredicted RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms