RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 LAMB4A4D0S4 1761 aa21.34■■□□□ 1.01
USHBP1-210ENST00000600286 PROSER3Q2NL68 480 aa21.34■■□□□ 1.01
USHBP1-210ENST00000600286 ERVV-1B6SEH8 477 aa21.33■■□□□ 1.01
USHBP1-210ENST00000600286 USPL1Q5W0Q7 1092 aa21.33■■□□□ 1.01
USHBP1-210ENST00000600286 AMIGO3Q86WK7 504 aa21.33■■□□□ 1.01
USHBP1-210ENST00000600286 SMC4Q9NTJ3 1288 aa21.33■■□□□ 1.01
USHBP1-210ENST00000600286 USP42Q9H9J4 1324 aaKnown RBP21.32■■□□□ 1
USHBP1-210ENST00000600286 RGL2O15211 777 aa21.32■■□□□ 1
USHBP1-210ENST00000600286 CLEC4GQ6UXB4 293 aa21.32■■□□□ 1
USHBP1-210ENST00000600286 ANKRD13DQ6ZTN6 518 aa21.32■■□□□ 1
USHBP1-210ENST00000600286 MAP3K15Q6ZN16 1313 aa21.31■■□□□ 1
USHBP1-210ENST00000600286 MYH14Q7Z406 1995 aaKnown RBP21.31■■□□□ 1
USHBP1-210ENST00000600286 RIC3Q7Z5B4 369 aa21.31■■□□□ 1
USHBP1-210ENST00000600286 SRP68Q9UHB9 627 aaKnown RBP21.31■■□□□ 1
USHBP1-210ENST00000600286 POLD1P28340 1107 aa21.3■■□□□ 1
USHBP1-210ENST00000600286 HSP90AB3PQ58FF7 597 aa21.3■■□□□ 1
USHBP1-210ENST00000600286 TTLL7Q6ZT98 887 aa21.3■■□□□ 1
USHBP1-210ENST00000600286 SSH1Q8WYL5 1049 aa21.3■■□□□ 1
USHBP1-210ENST00000600286 PHAXQ9H814 394 aaKnown RBP21.3■■□□□ 1
USHBP1-210ENST00000600286 CAMTA2O94983 1202 aa21.29■■□□□ 1
USHBP1-210ENST00000600286 GYS1P13807 737 aa21.29■■□□□ 1
USHBP1-210ENST00000600286 RARSP54136 660 aaKnown RBP21.29■■□□□ 1
USHBP1-210ENST00000600286 FLIIQ13045 1269 aa21.29■■□□□ 1
USHBP1-210ENST00000600286 FKBP5Q13451 457 aaPredicted RBP21.29■■□□□ 1
USHBP1-210ENST00000600286 LRP10Q7Z4F1 713 aa21.29■■□□□ 1
USHBP1-210ENST00000600286 PLBD2Q8NHP8 589 aa21.29■■□□□ 1
USHBP1-210ENST00000600286 ZBTB3Q9H5J0 574 aa21.29■■□□□ 1
USHBP1-210ENST00000600286 YY1P25490 414 aa21.28■■□□□ 1
USHBP1-210ENST00000600286 MRPL50Q8N5N7 158 aaKnown RBP21.28■■□□□ 1
USHBP1-210ENST00000600286 IPO8O15397 1037 aaKnown RBP21.27■■□□□ 1
USHBP1-210ENST00000600286 GIGYF2Q6Y7W6 1299 aaKnown RBP21.27■■□□□ 1
USHBP1-210ENST00000600286 SETDB2Q96T68 719 aa21.27■■□□□ 1
USHBP1-210ENST00000600286 BCL2L13Q9BXK5 485 aa21.27■■□□□ 1
USHBP1-210ENST00000600286 NEXNQ0ZGT2 675 aa21.26■□□□□ 0.99
USHBP1-210ENST00000600286 MSL1Q68DK7 614 aa21.26■□□□□ 0.99
USHBP1-210ENST00000600286 KSR2Q6VAB6 950 aa21.26■□□□□ 0.99
USHBP1-210ENST00000600286 PARP3Q9Y6F1 533 aa21.26■□□□□ 0.99
USHBP1-210ENST00000600286 FKBP8Q14318 412 aa21.25■□□□□ 0.99
USHBP1-210ENST00000600286 G2E3Q7L622 706 aa21.25■□□□□ 0.99
USHBP1-210ENST00000600286 PTPRCP08575 1304 aa21.25■□□□□ 0.99
USHBP1-210ENST00000600286 KIF16BQ96L93 1317 aa21.25■□□□□ 0.99
USHBP1-210ENST00000600286 PI4KAP2A4QPH2 592 aa21.24■□□□□ 0.99
USHBP1-210ENST00000600286 NPHP1O15259 732 aa21.24■□□□□ 0.99
USHBP1-210ENST00000600286 BRPF1P55201 1214 aaPredicted RBP21.24■□□□□ 0.99
USHBP1-210ENST00000600286 BICDL1Q6ZP65 573 aa21.24■□□□□ 0.99
USHBP1-210ENST00000600286 PI4KAP1Q8N8J0 262 aa21.24■□□□□ 0.99
USHBP1-210ENST00000600286 RCAN3Q9UKA8 241 aa21.24■□□□□ 0.99
USHBP1-210ENST00000600286 HLFQ16534 295 aa21.23■□□□□ 0.99
USHBP1-210ENST00000600286 NIP7Q9Y221 180 aaKnown RBP eCLIP21.23■□□□□ 0.99
USHBP1-210ENST00000600286 MAP3K2Q9Y2U5 619 aa21.23■□□□□ 0.99
USHBP1-210ENST00000600286 MMP10P09238 476 aa21.22■□□□□ 0.99
USHBP1-210ENST00000600286 TCIRG1Q13488 830 aa21.22■□□□□ 0.99
USHBP1-210ENST00000600286 PARP10Q53GL7 1025 aa21.22■□□□□ 0.99
USHBP1-210ENST00000600286 API5Q9BZZ5 524 aaKnown RBP21.22■□□□□ 0.99
USHBP1-210ENST00000600286 BCL2L12Q9HB09 334 aa21.22■□□□□ 0.99
USHBP1-210ENST00000600286 DCAF8L1A6NGE4 600 aa21.21■□□□□ 0.99
USHBP1-210ENST00000600286 TBC1D9BQ66K14 1250 aa21.21■□□□□ 0.99
USHBP1-210ENST00000600286 DNAAF4Q8WXU2 420 aa21.21■□□□□ 0.99
USHBP1-210ENST00000600286 FRAT1Q92837 279 aaPredicted RBP21.21■□□□□ 0.99
USHBP1-210ENST00000600286 METTL22Q9BUU2 404 aaPredicted RBP21.21■□□□□ 0.99
USHBP1-210ENST00000600286 NOB1Q9ULX3 412 aaKnown RBP21.21■□□□□ 0.99
USHBP1-210ENST00000600286 BCAR3O75815 825 aa21.2■□□□□ 0.98
USHBP1-210ENST00000600286 GTF2E1P29083 439 aaPredicted RBP21.2■□□□□ 0.98
USHBP1-210ENST00000600286 TM4SF1P30408 202 aa21.2■□□□□ 0.98
USHBP1-210ENST00000600286 NFIXQ14938 502 aa21.2■□□□□ 0.98
USHBP1-210ENST00000600286 PPP1R42Q7Z4L9 355 aa21.2■□□□□ 0.98
USHBP1-210ENST00000600286 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.2■□□□□ 0.98
USHBP1-210ENST00000600286 NLGN2Q8NFZ4 835 aa21.2■□□□□ 0.98
USHBP1-210ENST00000600286 ARHGAP45Q92619 1136 aa21.2■□□□□ 0.98
USHBP1-210ENST00000600286 NYXQ9GZU5 481 aa21.2■□□□□ 0.98
USHBP1-210ENST00000600286 GPTP24298 496 aa21.19■□□□□ 0.98
USHBP1-210ENST00000600286 TPTE2Q6XPS3 522 aa21.19■□□□□ 0.98
USHBP1-210ENST00000600286 MYD88Q99836 296 aa21.19■□□□□ 0.98
USHBP1-210ENST00000600286 KIF13BQ9NQT8 1826 aa21.18■□□□□ 0.98
USHBP1-210ENST00000600286 SLC4A10Q6U841 1118 aa21.18■□□□□ 0.98
USHBP1-210ENST00000600286 NBPF5PQ86XG9 351 aaPredicted RBP21.18■□□□□ 0.98
USHBP1-210ENST00000600286 ZNF34Q8IZ26 560 aa21.18■□□□□ 0.98
USHBP1-210ENST00000600286 CARMIL3Q8ND23 1372 aa21.18■□□□□ 0.98
USHBP1-210ENST00000600286 SERPINB2P05120 415 aa21.17■□□□□ 0.98
USHBP1-210ENST00000600286 MS4A1P11836 297 aa21.17■□□□□ 0.98
USHBP1-210ENST00000600286 TRIM28Q13263 835 aaKnown RBP21.17■□□□□ 0.98
USHBP1-210ENST00000600286 ZKSCAN2Q63HK3 967 aa21.17■□□□□ 0.98
USHBP1-210ENST00000600286 C4AP0C0L4 1744 aa21.17■□□□□ 0.98
USHBP1-210ENST00000600286 CACNA1FO60840 1977 aa21.17■□□□□ 0.98
USHBP1-210ENST00000600286 KIAA1551Q9HCM1 1747 aa21.16■□□□□ 0.98
USHBP1-210ENST00000600286 ATP10DQ9P241 1426 aa21.16■□□□□ 0.98
USHBP1-210ENST00000600286 CCDC191Q8NCU4 936 aa21.16■□□□□ 0.98
USHBP1-210ENST00000600286 FAM177BA6PVY3 158 aa21.15■□□□□ 0.98
USHBP1-210ENST00000600286 F6X3S4 739 aa21.15■□□□□ 0.98
USHBP1-210ENST00000600286 ATP5J2-PTCD1G3V325 749 aa21.15■□□□□ 0.98
USHBP1-210ENST00000600286 POLRMTO00411 1230 aaKnown RBP21.15■□□□□ 0.98
USHBP1-210ENST00000600286 HSP90B1P14625 803 aaKnown RBP21.15■□□□□ 0.98
USHBP1-210ENST00000600286 ST5P78524 1137 aa21.15■□□□□ 0.98
USHBP1-210ENST00000600286 LINS1Q8NG48 757 aa21.15■□□□□ 0.98
USHBP1-210ENST00000600286 UTP14AQ9BVJ6 771 aaKnown RBP21.15■□□□□ 0.98
USHBP1-210ENST00000600286 ADCY9O60503 1353 aa21.14■□□□□ 0.98
USHBP1-210ENST00000600286 ATF7IPQ6VMQ6 1270 aa21.14■□□□□ 0.97
USHBP1-210ENST00000600286 NLRP10Q86W26 655 aa21.14■□□□□ 0.97
USHBP1-210ENST00000600286 CNBD1Q8NA66 436 aa21.14■□□□□ 0.97
USHBP1-210ENST00000600286 ISCA1Q9BUE6 129 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms