RNA–Protein interactions for RNA: ENST00000599880.1

SIN3B-210, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 3

Gene SIN3B, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-210ENST00000599880 H0YIN7 160 aa14.32□□□□□ -0.12
SIN3B-210ENST00000599880 C2CD5Q86YS7 1000 aa14.32□□□□□ -0.12
SIN3B-210ENST00000599880 CCDC146Q8IYE0 955 aa14.32□□□□□ -0.12
SIN3B-210ENST00000599880 TTLL6Q8N841 843 aa14.32□□□□□ -0.12
SIN3B-210ENST00000599880 DICER1Q9UPY3 1922 aaKnown RBP14.31□□□□□ -0.12
SIN3B-210ENST00000599880 ST5P78524 1137 aa14.31□□□□□ -0.12
SIN3B-210ENST00000599880 GPBP1L1Q9HC44 474 aaPredicted RBP14.31□□□□□ -0.12
SIN3B-210ENST00000599880 TIAM2Q8IVF5 1701 aa14.31□□□□□ -0.12
SIN3B-210ENST00000599880 ERVV-1B6SEH8 477 aa14.3□□□□□ -0.12
SIN3B-210ENST00000599880 C1QTNF8P60827 252 aa14.3□□□□□ -0.12
SIN3B-210ENST00000599880 TRIM35Q9UPQ4 493 aa14.3□□□□□ -0.12
SIN3B-210ENST00000599880 RRP7AQ9Y3A4 280 aaKnown RBP14.3□□□□□ -0.12
SIN3B-210ENST00000599880 TNRC6CQ9HCJ0 1690 aaKnown RBP14.3□□□□□ -0.12
SIN3B-210ENST00000599880 SLX4Q8IY92 1834 aa14.29□□□□□ -0.12
SIN3B-210ENST00000599880 CHL1O00533 1208 aa14.29□□□□□ -0.12
SIN3B-210ENST00000599880 NPHP1O15259 732 aa14.29□□□□□ -0.12
SIN3B-210ENST00000599880 NEUROD2Q15784 382 aa14.29□□□□□ -0.12
SIN3B-210ENST00000599880 NBPF5PQ86XG9 351 aaPredicted RBP14.29□□□□□ -0.12
SIN3B-210ENST00000599880 NIP7Q9Y221 180 aaKnown RBP eCLIP14.29□□□□□ -0.12
SIN3B-210ENST00000599880 MAP3K15Q6ZN16 1313 aa14.29□□□□□ -0.12
SIN3B-210ENST00000599880 IBTKQ9P2D0 1353 aaPredicted RBP14.29□□□□□ -0.12
SIN3B-210ENST00000599880 TPTE2Q6XPS3 522 aa14.28□□□□□ -0.12
SIN3B-210ENST00000599880 KIF6Q6ZMV9 814 aa14.28□□□□□ -0.12
SIN3B-210ENST00000599880 ZC3H4Q9UPT8 1303 aaKnown RBP14.28□□□□□ -0.12
SIN3B-210ENST00000599880 RIC1Q4ADV7 1423 aa14.27□□□□□ -0.12
SIN3B-210ENST00000599880 ZNF316A6NFI3 1004 aaPredicted RBP14.27□□□□□ -0.13
SIN3B-210ENST00000599880 HLFQ16534 295 aa14.27□□□□□ -0.13
SIN3B-210ENST00000599880 C9orf131Q5VYM1 1079 aa14.27□□□□□ -0.13
SIN3B-210ENST00000599880 STYK1Q6J9G0 422 aa14.27□□□□□ -0.13
SIN3B-210ENST00000599880 KLRG2A4D1S0 409 aaPredicted RBP14.26□□□□□ -0.13
SIN3B-210ENST00000599880 HOXB7P09629 217 aa14.26□□□□□ -0.13
SIN3B-210ENST00000599880 SRGNP10124 158 aa14.26□□□□□ -0.13
SIN3B-210ENST00000599880 MYL6BP14649 208 aa14.26□□□□□ -0.13
SIN3B-210ENST00000599880 PDIA6Q15084 440 aa14.26□□□□□ -0.13
SIN3B-210ENST00000599880 TTLL7Q6ZT98 887 aa14.26□□□□□ -0.13
SIN3B-210ENST00000599880 LRP10Q7Z4F1 713 aa14.26□□□□□ -0.13
SIN3B-210ENST00000599880 CNKSR1Q969H4 720 aa14.26□□□□□ -0.13
SIN3B-210ENST00000599880 MASTLQ96GX5 879 aa14.26□□□□□ -0.13
SIN3B-210ENST00000599880 CFAP44Q96MT7 982 aa14.26□□□□□ -0.13
SIN3B-210ENST00000599880 GIGYF2Q6Y7W6 1299 aaKnown RBP14.25□□□□□ -0.13
SIN3B-210ENST00000599880 CCDC24Q8N4L8 307 aa14.25□□□□□ -0.13
SIN3B-210ENST00000599880 ZNF526Q8TF50 670 aaPredicted RBP14.25□□□□□ -0.13
SIN3B-210ENST00000599880 ZNF622Q969S3 477 aaKnown RBP eCLIP14.25□□□□□ -0.133e-11■■□□□ 12.8
SIN3B-210ENST00000599880 NYXQ9GZU5 481 aa14.25□□□□□ -0.13
SIN3B-210ENST00000599880 RNF181Q9P0P0 153 aa14.25□□□□□ -0.13
SIN3B-210ENST00000599880 APAF1O14727 1248 aa14.24□□□□□ -0.13
SIN3B-210ENST00000599880 EIF2S2P20042 333 aaKnown RBP14.24□□□□□ -0.13
SIN3B-210ENST00000599880 LMNB1P20700 586 aa14.24□□□□□ -0.13
SIN3B-210ENST00000599880 CALD1Q05682 793 aaKnown RBP14.24□□□□□ -0.13
SIN3B-210ENST00000599880 SOGA3Q5TF21 947 aa14.24□□□□□ -0.13
SIN3B-210ENST00000599880 NGEFQ8N5V2 710 aa14.24□□□□□ -0.13
SIN3B-210ENST00000599880 LTBP3Q9NS15 1303 aa14.23□□□□□ -0.13
SIN3B-210ENST00000599880 NFKBIEO00221 500 aa14.23□□□□□ -0.13
SIN3B-210ENST00000599880 NPR1P16066 1061 aa14.23□□□□□ -0.13
SIN3B-210ENST00000599880 RASSF7Q02833 373 aa14.23□□□□□ -0.13
SIN3B-210ENST00000599880 ZBTB3Q9H5J0 574 aa14.23□□□□□ -0.13
SIN3B-210ENST00000599880 DDX21Q9NR30 783 aaKnown RBP eCLIP14.23□□□□□ -0.13
SIN3B-210ENST00000599880 LAMB2P55268 1798 aa14.22□□□□□ -0.13
SIN3B-210ENST00000599880 UBN2Q6ZU65 1347 aa14.22□□□□□ -0.13
SIN3B-210ENST00000599880 KDM2BQ8NHM5 1336 aa14.22□□□□□ -0.13
SIN3B-210ENST00000599880 KIF3CO14782 793 aa14.22□□□□□ -0.13
SIN3B-210ENST00000599880 ZNF853P0CG23 659 aa14.22□□□□□ -0.13
SIN3B-210ENST00000599880 GTF2E1P29083 439 aaPredicted RBP14.22□□□□□ -0.13
SIN3B-210ENST00000599880 PARP10Q53GL7 1025 aa14.22□□□□□ -0.13
SIN3B-210ENST00000599880 PRPF40BQ6NWY9 871 aaKnown RBP14.22□□□□□ -0.13
SIN3B-210ENST00000599880 ZNF34Q8IZ26 560 aa14.22□□□□□ -0.13
SIN3B-210ENST00000599880 IFT57Q9NWB7 429 aa14.22□□□□□ -0.13
SIN3B-210ENST00000599880 LAS1LQ9Y4W2 734 aaKnown RBP14.22□□□□□ -0.13
SIN3B-210ENST00000599880 ABCC12Q96J65 1359 aa14.22□□□□□ -0.13
SIN3B-210ENST00000599880 RNF123Q5XPI4 1314 aa14.21□□□□□ -0.13
SIN3B-210ENST00000599880 C21orf2O43822 256 aa14.21□□□□□ -0.13
SIN3B-210ENST00000599880 GNAI1P63096 354 aa14.21□□□□□ -0.13
SIN3B-210ENST00000599880 PROSER3Q2NL68 480 aa14.21□□□□□ -0.13
SIN3B-210ENST00000599880 CRY2Q49AN0 593 aa14.21□□□□□ -0.13
SIN3B-210ENST00000599880 MBIPQ9NS73 344 aa14.21□□□□□ -0.13
SIN3B-210ENST00000599880 FAM177BA6PVY3 158 aa14.2□□□□□ -0.14
SIN3B-210ENST00000599880 ANP32CO43423 234 aa14.2□□□□□ -0.14
SIN3B-210ENST00000599880 NTSR2O95665 410 aa14.2□□□□□ -0.14
SIN3B-210ENST00000599880 PRELPP51888 382 aa14.2□□□□□ -0.14
SIN3B-210ENST00000599880 KRT24Q2M2I5 525 aa14.2□□□□□ -0.14
SIN3B-210ENST00000599880 CCDC184Q52MB2 194 aa14.2□□□□□ -0.14
SIN3B-210ENST00000599880 HSP90AB3PQ58FF7 597 aa14.2□□□□□ -0.14
SIN3B-210ENST00000599880 HDGFL1Q5TGJ6 251 aa14.2□□□□□ -0.14
SIN3B-210ENST00000599880 PPP1R42Q7Z4L9 355 aa14.2□□□□□ -0.14
SIN3B-210ENST00000599880 WDR90Q96KV7 1748 aa14.19□□□□□ -0.14
SIN3B-210ENST00000599880 SENP3-EIF4A1A0A087X0R7 540 aa14.19□□□□□ -0.14
SIN3B-210ENST00000599880 ANXA1P04083 346 aa14.19□□□□□ -0.14
SIN3B-210ENST00000599880 GPTP24298 496 aa14.19□□□□□ -0.14
SIN3B-210ENST00000599880 ALDH1B1P30837 517 aa14.19□□□□□ -0.14
SIN3B-210ENST00000599880 CCDC27Q2M243 656 aa14.19□□□□□ -0.14
SIN3B-210ENST00000599880 NCBP3Q53F19 620 aaKnown RBP14.19□□□□□ -0.14
SIN3B-210ENST00000599880 SUSD4Q5VX71 490 aa14.19□□□□□ -0.14
SIN3B-210ENST00000599880 COPS6Q7L5N1 327 aa14.19□□□□□ -0.14
SIN3B-210ENST00000599880 C7orf43Q8WVR3 580 aa14.19□□□□□ -0.14
SIN3B-210ENST00000599880 TAOK3Q9H2K8 898 aa14.19□□□□□ -0.14
SIN3B-210ENST00000599880 DBF4Q9UBU7 674 aaPredicted RBP14.19□□□□□ -0.14
SIN3B-210ENST00000599880 ERFEQ4G0M1 354 aa14.18□□□□□ -0.14
SIN3B-210ENST00000599880 CCDC93Q567U6 631 aa14.18□□□□□ -0.14
SIN3B-210ENST00000599880 DUSP27Q5VZP5 1158 aa14.18□□□□□ -0.14
SIN3B-210ENST00000599880 NUTM1Q86Y26 1132 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms