RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 MYL6BP14649 208 aa18.4■□□□□ 0.54
LIG1-218ENST00000599322 GTF2E1P29083 439 aaPredicted RBP18.4■□□□□ 0.54
LIG1-218ENST00000599322 PDE6BP35913 854 aa18.4■□□□□ 0.54
LIG1-218ENST00000599322 CNBD1Q8NA66 436 aa18.4■□□□□ 0.54
LIG1-218ENST00000599322 CHMP4AQ9BY43 222 aa18.4■□□□□ 0.54
LIG1-218ENST00000599322 TRIM35Q9UPQ4 493 aa18.4■□□□□ 0.54
LIG1-218ENST00000599322 NBPF26B4DH59 902 aa18.39■□□□□ 0.53
LIG1-218ENST00000599322 CHL1O00533 1208 aa18.39■□□□□ 0.53
LIG1-218ENST00000599322 NBPF10Q6P3W6 841 aaKnown RBP18.39■□□□□ 0.53
LIG1-218ENST00000599322 ARHGAP27Q6ZUM4 889 aa18.39■□□□□ 0.53
LIG1-218ENST00000599322 NBPF5PQ86XG9 351 aaPredicted RBP18.39■□□□□ 0.53
LIG1-218ENST00000599322 NBPF15Q8N660 670 aa18.39■□□□□ 0.53
LIG1-218ENST00000599322 CFAP44Q96MT7 982 aa18.39■□□□□ 0.53
LIG1-218ENST00000599322 CCDC88AQ3V6T2 1871 aa18.39■□□□□ 0.53
LIG1-218ENST00000599322 KDM3BQ7LBC6 1761 aa18.38■□□□□ 0.53
LIG1-218ENST00000599322 HSPA6P17066 643 aa18.38■□□□□ 0.53
LIG1-218ENST00000599322 GNAI1P63096 354 aa18.38■□□□□ 0.53
LIG1-218ENST00000599322 TPTE2Q6XPS3 522 aa18.38■□□□□ 0.53
LIG1-218ENST00000599322 BRIP1Q9BX63 1249 aa18.38■□□□□ 0.53
LIG1-218ENST00000599322 NIP7Q9Y221 180 aaKnown RBP eCLIP18.38■□□□□ 0.53
LIG1-218ENST00000599322 ERVV-1B6SEH8 477 aa18.37■□□□□ 0.53
LIG1-218ENST00000599322 CHRNA5P30532 468 aa18.37■□□□□ 0.53
LIG1-218ENST00000599322 C2CD5Q86YS7 1000 aa18.37■□□□□ 0.53
LIG1-218ENST00000599322 HOXB7P09629 217 aa18.35■□□□□ 0.53
LIG1-218ENST00000599322 TTLL6Q8N841 843 aa18.35■□□□□ 0.53
LIG1-218ENST00000599322 NYXQ9GZU5 481 aa18.35■□□□□ 0.53
LIG1-218ENST00000599322 IFT57Q9NWB7 429 aa18.35■□□□□ 0.53
LIG1-218ENST00000599322 LAMB4A4D0S4 1761 aa18.35■□□□□ 0.53
LIG1-218ENST00000599322 MAP3K15Q6ZN16 1313 aa18.34■□□□□ 0.53
LIG1-218ENST00000599322 CCDC184Q52MB2 194 aa18.34■□□□□ 0.53
LIG1-218ENST00000599322 PRR5LQ6MZQ0 368 aa18.34■□□□□ 0.53
LIG1-218ENST00000599322 ZNF622Q969S3 477 aaKnown RBP eCLIP18.34■□□□□ 0.53
LIG1-218ENST00000599322 ANKRD31Q8N7Z5 1873 aa18.34■□□□□ 0.53
LIG1-218ENST00000599322 HDGFL1Q5TGJ6 251 aa18.33■□□□□ 0.52
LIG1-218ENST00000599322 NECTIN2Q92692 538 aa18.33■□□□□ 0.52
LIG1-218ENST00000599322 SCN7AQ01118 1682 aa18.33■□□□□ 0.52
LIG1-218ENST00000599322 FAM177BA6PVY3 158 aa18.32■□□□□ 0.52
LIG1-218ENST00000599322 ZBTB3Q9H5J0 574 aa18.32■□□□□ 0.52
LIG1-218ENST00000599322 NMRK2Q9NPI5 230 aa18.32■□□□□ 0.52
LIG1-218ENST00000599322 TNRC6CQ9HCJ0 1690 aaKnown RBP18.31■□□□□ 0.52
LIG1-218ENST00000599322 HLFQ16534 295 aa18.31■□□□□ 0.52
LIG1-218ENST00000599322 HSP90AB3PQ58FF7 597 aa18.31■□□□□ 0.52
LIG1-218ENST00000599322 C9orf131Q5VYM1 1079 aa18.31■□□□□ 0.52
LIG1-218ENST00000599322 TTLL7Q6ZT98 887 aa18.31■□□□□ 0.52
LIG1-218ENST00000599322 CNKSR1Q969H4 720 aa18.31■□□□□ 0.52
LIG1-218ENST00000599322 DDX21Q9NR30 783 aaKnown RBP eCLIP18.31■□□□□ 0.52
LIG1-218ENST00000599322 MBIPQ9NS73 344 aa18.31■□□□□ 0.52
LIG1-218ENST00000599322 DBF4Q9UBU7 674 aaPredicted RBP18.31■□□□□ 0.52
LIG1-218ENST00000599322 WDR90Q96KV7 1748 aa18.31■□□□□ 0.52
LIG1-218ENST00000599322 AIMP1Q12904 312 aaKnown RBP18.3■□□□□ 0.52
LIG1-218ENST00000599322 CCDC27Q2M243 656 aa18.3■□□□□ 0.52
LIG1-218ENST00000599322 DUSP27Q5VZP5 1158 aa18.3■□□□□ 0.52
LIG1-218ENST00000599322 PPP1R42Q7Z4L9 355 aa18.3■□□□□ 0.52
LIG1-218ENST00000599322 CCDC24Q8N4L8 307 aa18.3■□□□□ 0.52
LIG1-218ENST00000599322 CACNA1SQ13698 1873 aa18.29■□□□□ 0.52
LIG1-218ENST00000599322 TOMM70O94826 608 aa18.29■□□□□ 0.52
LIG1-218ENST00000599322 NCBP3Q53F19 620 aaKnown RBP18.29■□□□□ 0.52
LIG1-218ENST00000599322 PARP10Q53GL7 1025 aa18.29■□□□□ 0.52
LIG1-218ENST00000599322 GIGYF2Q6Y7W6 1299 aaKnown RBP18.29■□□□□ 0.52
LIG1-218ENST00000599322 FAM9BQ8IZU0 186 aa18.29■□□□□ 0.52
LIG1-218ENST00000599322 MASTLQ96GX5 879 aa18.29■□□□□ 0.52
LIG1-218ENST00000599322 HYPKQ9NX55 129 aa18.29■□□□□ 0.52
LIG1-218ENST00000599322 COL11A2P13942 1736 aaPredicted RBP18.29■□□□□ 0.52
LIG1-218ENST00000599322 TIAM2Q8IVF5 1701 aa18.29■□□□□ 0.52
LIG1-218ENST00000599322 BCORQ6W2J9 1755 aa18.28■□□□□ 0.52
LIG1-218ENST00000599322 ZNF853P0CG23 659 aa18.28■□□□□ 0.52
LIG1-218ENST00000599322 GPTP24298 496 aa18.28■□□□□ 0.52
LIG1-218ENST00000599322 STYK1Q6J9G0 422 aa18.28■□□□□ 0.52
LIG1-218ENST00000599322 COPS6Q7L5N1 327 aa18.28■□□□□ 0.52
LIG1-218ENST00000599322 KRT24Q2M2I5 525 aa18.27■□□□□ 0.52
LIG1-218ENST00000599322 SOGA3Q5TF21 947 aa18.27■□□□□ 0.52
LIG1-218ENST00000599322 XAGE3Q8WTP9 111 aa18.27■□□□□ 0.52
LIG1-218ENST00000599322 DICER1Q9UPY3 1922 aaKnown RBP18.27■□□□□ 0.51
LIG1-218ENST00000599322 ANXA1P04083 346 aa18.26■□□□□ 0.51
LIG1-218ENST00000599322 NPR1P16066 1061 aa18.26■□□□□ 0.51
LIG1-218ENST00000599322 PDIA6Q15084 440 aa18.26■□□□□ 0.51
LIG1-218ENST00000599322 WWC1Q8IX03 1113 aa18.26■□□□□ 0.51
LIG1-218ENST00000599322 RNF181Q9P0P0 153 aa18.26■□□□□ 0.51
LIG1-218ENST00000599322 CHPF2Q9P2E5 772 aa18.26■□□□□ 0.51
LIG1-218ENST00000599322 ELL2O00472 640 aaPredicted RBP18.25■□□□□ 0.51
LIG1-218ENST00000599322 ALDH1B1P30837 517 aa18.25■□□□□ 0.51
LIG1-218ENST00000599322 CCDC30Q5VVM6 783 aa18.25■□□□□ 0.51
LIG1-218ENST00000599322 SALL2Q9Y467 1007 aaPredicted RBP18.25■□□□□ 0.51
LIG1-218ENST00000599322 IL16Q14005 1332 aa18.24■□□□□ 0.51
LIG1-218ENST00000599322 FER1L6Q2WGJ9 1857 aa18.24■□□□□ 0.51
LIG1-218ENST00000599322 SRGNP10124 158 aa18.24■□□□□ 0.51
LIG1-218ENST00000599322 PROSER3Q2NL68 480 aa18.24■□□□□ 0.51
LIG1-218ENST00000599322 ANKRD13DQ6ZTN6 518 aa18.24■□□□□ 0.51
LIG1-218ENST00000599322 ZNF34Q8IZ26 560 aa18.24■□□□□ 0.51
LIG1-218ENST00000599322 UTP14AQ9BVJ6 771 aaKnown RBP18.24■□□□□ 0.51
LIG1-218ENST00000599322 APLP1P51693 650 aa18.23■□□□□ 0.51
LIG1-218ENST00000599322 PRELPP51888 382 aa18.23■□□□□ 0.51
LIG1-218ENST00000599322 RASSF7Q02833 373 aa18.23■□□□□ 0.51
LIG1-218ENST00000599322 GOLGA2Q08379 1002 aa18.23■□□□□ 0.51
LIG1-218ENST00000599322 IFFO2Q5TF58 517 aa18.23■□□□□ 0.51
LIG1-218ENST00000599322 WDR63Q8IWG1 891 aa18.23■□□□□ 0.51
LIG1-218ENST00000599322 RPGRQ92834 1020 aaKnown RBP18.23■□□□□ 0.51
LIG1-218ENST00000599322 STK31Q9BXU1 1019 aa18.23■□□□□ 0.51
LIG1-218ENST00000599322 TMX4Q9H1E5 349 aaPredicted RBP18.23■□□□□ 0.51
LIG1-218ENST00000599322 ZNF219Q9P2Y4 722 aaPredicted RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 1361.6 ms