RNA–Protein interactions for RNA: ENST00000599188.5

PDE4C-214, Transcript of phosphodiesterase 4C, humanhuman

TSL 5

Gene PDE4C, Length 2,101 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-214ENST00000599188 PRDM11Q9NQV5 511 aa14.97□□□□□ -0.01
PDE4C-214ENST00000599188 DDX21Q9NR30 783 aaKnown RBP eCLIP14.97□□□□□ -0.01
PDE4C-214ENST00000599188 TRPC5Q9UL62 973 aaPredicted RBP14.97□□□□□ -0.01
PDE4C-214ENST00000599188 KDM6AO15550 1401 aaPredicted RBP14.97□□□□□ -0.01
PDE4C-214ENST00000599188 NEK4P51957 841 aa14.96□□□□□ -0.01
PDE4C-214ENST00000599188 ANAPC15P60006 121 aa14.96□□□□□ -0.01
PDE4C-214ENST00000599188 ZNF790Q6PG37 636 aa14.96□□□□□ -0.01
PDE4C-214ENST00000599188 SLC52A2Q9HAB3 445 aa14.96□□□□□ -0.01
PDE4C-214ENST00000599188 RTN4Q9NQC3 1192 aaKnown RBP14.96□□□□□ -0.01
PDE4C-214ENST00000599188 PALD1Q9ULE6 856 aa14.96□□□□□ -0.01
PDE4C-214ENST00000599188 DDX58O95786 925 aaKnown RBP14.96□□□□□ -0.01
PDE4C-214ENST00000599188 CYP2E1P05181 493 aaPredicted RBP14.96□□□□□ -0.01
PDE4C-214ENST00000599188 PHKG2P15735 406 aa14.96□□□□□ -0.01
PDE4C-214ENST00000599188 RBM6P78332 1123 aaKnown RBP14.96□□□□□ -0.01
PDE4C-214ENST00000599188 SLC39A6Q13433 755 aa14.96□□□□□ -0.01
PDE4C-214ENST00000599188 PDIA6Q15084 440 aa14.96□□□□□ -0.01
PDE4C-214ENST00000599188 SPG7Q9UQ90 795 aa14.96□□□□□ -0.01
PDE4C-214ENST00000599188 HDAC5Q9UQL6 1122 aa14.96□□□□□ -0.01
PDE4C-214ENST00000599188 MEGF6O75095 1541 aa14.95□□□□□ -0.02
PDE4C-214ENST00000599188 SLIT2O94813 1529 aa14.95□□□□□ -0.02
PDE4C-214ENST00000599188 GOLGA6L22H0YM25 854 aa14.95□□□□□ -0.02
PDE4C-214ENST00000599188 BAG4O95429 457 aaKnown RBP14.95□□□□□ -0.02
PDE4C-214ENST00000599188 MAP4K4O95819 1239 aaPredicted RBP14.95□□□□□ -0.02
PDE4C-214ENST00000599188 OS9Q13438 667 aaPredicted RBP14.95□□□□□ -0.02
PDE4C-214ENST00000599188 ZGPATQ8N5A5 531 aaKnown RBP14.95□□□□□ -0.02
PDE4C-214ENST00000599188 LINS1Q8NG48 757 aa14.95□□□□□ -0.02
PDE4C-214ENST00000599188 ARXQ96QS3 562 aa14.95□□□□□ -0.02
PDE4C-214ENST00000599188 COL18A1P39060 1754 aa14.95□□□□□ -0.02
PDE4C-214ENST00000599188 EPB41L2O43491 1005 aaKnown RBP14.95□□□□□ -0.02
PDE4C-214ENST00000599188 IL17RAQ96F46 866 aa14.95□□□□□ -0.02
PDE4C-214ENST00000599188 IL25Q9H293 177 aa14.95□□□□□ -0.02
PDE4C-214ENST00000599188 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.95□□□□□ -0.02
PDE4C-214ENST00000599188 SCN11AQ9UI33 1791 aa14.94□□□□□ -0.02
PDE4C-214ENST00000599188 USP42Q9H9J4 1324 aaKnown RBP14.94□□□□□ -0.02
PDE4C-214ENST00000599188 CSB-PGBD3P0DP91 1061 aa14.94□□□□□ -0.02
PDE4C-214ENST00000599188 XRCC6P12956 609 aaKnown RBP eCLIP14.94□□□□□ -0.02
PDE4C-214ENST00000599188 MCM2P49736 904 aa14.94□□□□□ -0.02
PDE4C-214ENST00000599188 AIMP1Q12904 312 aaKnown RBP14.94□□□□□ -0.02
PDE4C-214ENST00000599188 PKP1Q13835 747 aa14.94□□□□□ -0.02
PDE4C-214ENST00000599188 NFATC2IPQ8NCF5 419 aa14.94□□□□□ -0.02
PDE4C-214ENST00000599188 STRN4Q9NRL3 753 aa14.94□□□□□ -0.02
PDE4C-214ENST00000599188 ABCC6O95255 1503 aa14.94□□□□□ -0.02
PDE4C-214ENST00000599188 TTC41PQ6P2S7 1318 aa14.94□□□□□ -0.02
PDE4C-214ENST00000599188 ATRNO75882 1429 aa14.93□□□□□ -0.02
PDE4C-214ENST00000599188 IFNL2Q8IZJ0 200 aa14.93□□□□□ -0.02
PDE4C-214ENST00000599188 CNTROBQ8N137 903 aa14.93□□□□□ -0.02
PDE4C-214ENST00000599188 UTYO14607 1347 aa14.93□□□□□ -0.02
PDE4C-214ENST00000599188 GRM8O00222 908 aa14.93□□□□□ -0.02
PDE4C-214ENST00000599188 CLASRPQ8N2M8 674 aaKnown RBP14.93□□□□□ -0.02
PDE4C-214ENST00000599188 TMX3Q96JJ7 454 aa14.93□□□□□ -0.02
PDE4C-214ENST00000599188 GJD4Q96KN9 370 aaPredicted RBP14.93□□□□□ -0.02
PDE4C-214ENST00000599188 C5P01031 1676 aa14.93□□□□□ -0.02
PDE4C-214ENST00000599188 ERC1Q8IUD2 1116 aa14.92□□□□□ -0.02
PDE4C-214ENST00000599188 AK9Q5TCS8 1911 aa14.92□□□□□ -0.02
PDE4C-214ENST00000599188 SGSM2O43147 1006 aa14.92□□□□□ -0.02
PDE4C-214ENST00000599188 GLRX3O76003 335 aaKnown RBP14.92□□□□□ -0.02
PDE4C-214ENST00000599188 HSPA4P34932 840 aa14.92□□□□□ -0.02
PDE4C-214ENST00000599188 RIC3Q7Z5B4 369 aa14.92□□□□□ -0.02
PDE4C-214ENST00000599188 KAZALD1Q96I82 304 aa14.92□□□□□ -0.02
PDE4C-214ENST00000599188 SUCLG2Q96I99 432 aa14.92□□□□□ -0.02
PDE4C-214ENST00000599188 ISY1Q9ULR0 285 aaKnown RBP14.92□□□□□ -0.02
PDE4C-214ENST00000599188 PA2G4Q9UQ80 394 aaKnown RBP14.92□□□□□ -0.02
PDE4C-214ENST00000599188 PLEKHG2Q9H7P9 1386 aa14.91□□□□□ -0.02
PDE4C-214ENST00000599188 MYL6BP14649 208 aa14.91□□□□□ -0.02
PDE4C-214ENST00000599188 MRE11P49959 708 aa14.91□□□□□ -0.02
PDE4C-214ENST00000599188 COL14A1Q05707 1796 aaKnown RBP14.91□□□□□ -0.02
PDE4C-214ENST00000599188 A0A0G2JS52 829 aa14.9□□□□□ -0.02
PDE4C-214ENST00000599188 IGKV5-2P06315 115 aa14.9□□□□□ -0.02
PDE4C-214ENST00000599188 LARP1Q6PKG0 1096 aaKnown RBP14.9□□□□□ -0.02
PDE4C-214ENST00000599188 ZNF496Q96IT1 587 aaPredicted RBP14.9□□□□□ -0.02
PDE4C-214ENST00000599188 DCAF5Q96JK2 942 aa14.9□□□□□ -0.02
PDE4C-214ENST00000599188 BICC1Q9H694 974 aaKnown RBP14.9□□□□□ -0.02
PDE4C-214ENST00000599188 RAD50Q92878 1312 aa14.9□□□□□ -0.02
PDE4C-214ENST00000599188 NWD2Q9ULI1 1742 aa14.9□□□□□ -0.02
PDE4C-214ENST00000599188 MRC1P22897 1456 aa14.9□□□□□ -0.02
PDE4C-214ENST00000599188 CYP27B1O15528 508 aa14.9□□□□□ -0.02
PDE4C-214ENST00000599188 MCTP1Q6DN14 999 aa14.9□□□□□ -0.02
PDE4C-214ENST00000599188 ZDHHC9Q9Y397 364 aa14.9□□□□□ -0.02
PDE4C-214ENST00000599188 GLI3P10071 1580 aa14.9□□□□□ -0.02
PDE4C-214ENST00000599188 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.9□□□□□ -0.02
PDE4C-214ENST00000599188 IFIT2P09913 472 aaKnown RBP14.89□□□□□ -0.03
PDE4C-214ENST00000599188 CUL4AQ13619 759 aa14.89□□□□□ -0.03
PDE4C-214ENST00000599188 NRAPQ86VF7 1730 aa14.89□□□□□ -0.03
PDE4C-214ENST00000599188 XAGE3Q8WTP9 111 aa14.89□□□□□ -0.03
PDE4C-214ENST00000599188 GPATCH3Q96I76 525 aa14.89□□□□□ -0.03
PDE4C-214ENST00000599188 ECHDC1Q9NTX5 307 aa14.89□□□□□ -0.03
PDE4C-214ENST00000599188 CPDO75976 1380 aa14.89□□□□□ -0.03
PDE4C-214ENST00000599188 NEXNQ0ZGT2 675 aa14.89□□□□□ -0.03
PDE4C-214ENST00000599188 FAM98CQ17RN3 349 aaKnown RBP14.89□□□□□ -0.03
PDE4C-214ENST00000599188 KLHL40Q2TBA0 621 aa14.89□□□□□ -0.03
PDE4C-214ENST00000599188 COPS6Q7L5N1 327 aa14.89□□□□□ -0.03
PDE4C-214ENST00000599188 TTC5Q8N0Z6 440 aa14.89□□□□□ -0.03
PDE4C-214ENST00000599188 PANK2Q9BZ23 570 aa14.89□□□□□ -0.03
PDE4C-214ENST00000599188 UPF3BQ9BZI7 483 aaKnown RBP14.89□□□□□ -0.03
PDE4C-214ENST00000599188 GRPEL1Q9HAV7 217 aa14.89□□□□□ -0.03
PDE4C-214ENST00000599188 NEURL1BA8MQ27 555 aa14.88□□□□□ -0.03
PDE4C-214ENST00000599188 SNRPA1P09661 255 aaKnown RBP14.88□□□□□ -0.03
PDE4C-214ENST00000599188 VPS72Q15906 364 aa14.88□□□□□ -0.03
PDE4C-214ENST00000599188 CWC27Q6UX04 472 aaKnown RBP14.88□□□□□ -0.03
PDE4C-214ENST00000599188 LSG1Q9H089 658 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms