RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 HSPA5P11021 654 aaKnown RBP14.41□□□□□ -0.1
SMG9-207ENST00000598860 RPIAP49247 311 aa14.41□□□□□ -0.1
SMG9-207ENST00000598860 TRIM34Q9BYJ4 488 aa14.41□□□□□ -0.1
SMG9-207ENST00000598860 CENPJQ9HC77 1338 aaPredicted RBP14.41□□□□□ -0.1
SMG9-207ENST00000598860 ADGRB2O60241 1585 aa14.4□□□□□ -0.1
SMG9-207ENST00000598860 POM121CA8CG34 1229 aa14.4□□□□□ -0.1
SMG9-207ENST00000598860 FOXO3O43524 673 aa14.4□□□□□ -0.1
SMG9-207ENST00000598860 NR6A1Q15406 480 aa14.4□□□□□ -0.1
SMG9-207ENST00000598860 MEX3CQ5U5Q3 659 aaKnown RBP14.4□□□□□ -0.1
SMG9-207ENST00000598860 RGS17Q9UGC6 210 aaPredicted RBP14.4□□□□□ -0.1
SMG9-207ENST00000598860 NHSL1Q5SYE7 1610 aa14.4□□□□□ -0.1
SMG9-207ENST00000598860 SOS2Q07890 1332 aaPredicted RBP14.4□□□□□ -0.1
SMG9-207ENST00000598860 RGS20O76081 388 aa14.39□□□□□ -0.11
SMG9-207ENST00000598860 V9GY48 417 aaPredicted RBP14.39□□□□□ -0.11
SMG9-207ENST00000598860 NPHP3Q7Z494 1330 aa14.39□□□□□ -0.11
SMG9-207ENST00000598860 TRIM32Q13049 653 aa14.38□□□□□ -0.11
SMG9-207ENST00000598860 IRF5Q13568 498 aa14.38□□□□□ -0.11
SMG9-207ENST00000598860 EPS8L1Q8TE68 723 aa14.38□□□□□ -0.11
SMG9-207ENST00000598860 SHPRHQ149N8 1683 aa14.37□□□□□ -0.11
SMG9-207ENST00000598860 ST20-MTHFSA0A0A6YYL1 179 aa14.37□□□□□ -0.11
SMG9-207ENST00000598860 GPR37L1O60883 481 aa14.37□□□□□ -0.11
SMG9-207ENST00000598860 SPRYD7Q5W111 196 aa14.37□□□□□ -0.11
SMG9-207ENST00000598860 CALR3Q96L12 384 aaKnown RBP14.37□□□□□ -0.11
SMG9-207ENST00000598860 HIRIP3Q9BW71 556 aaPredicted RBP14.37□□□□□ -0.11
SMG9-207ENST00000598860 CD2BP2O95400 341 aaKnown RBP14.36□□□□□ -0.11
SMG9-207ENST00000598860 GLMNQ92990 594 aa14.36□□□□□ -0.11
SMG9-207ENST00000598860 PNPLA6Q8IY17 1366 aa14.35□□□□□ -0.11
SMG9-207ENST00000598860 FMN2Q9NZ56 1722 aa14.35□□□□□ -0.11
SMG9-207ENST00000598860 XPCQ01831 940 aaPredicted RBP14.35□□□□□ -0.11
SMG9-207ENST00000598860 ITSN1Q15811 1721 aa14.35□□□□□ -0.11
SMG9-207ENST00000598860 WASLO00401 505 aaPredicted RBP14.34□□□□□ -0.11
SMG9-207ENST00000598860 TMF1P82094 1093 aa14.34□□□□□ -0.11
SMG9-207ENST00000598860 LINC01559Q495D7 138 aa14.34□□□□□ -0.11
SMG9-207ENST00000598860 BAP1Q92560 729 aa14.34□□□□□ -0.11
SMG9-207ENST00000598860 CDCA8Q53HL2 280 aa14.33□□□□□ -0.12
SMG9-207ENST00000598860 POTEAQ6S8J7 498 aa14.33□□□□□ -0.12
SMG9-207ENST00000598860 KRT28Q7Z3Y7 464 aa14.33□□□□□ -0.12
SMG9-207ENST00000598860 TESK2Q96S53 571 aa14.33□□□□□ -0.12
SMG9-207ENST00000598860 LRP6O75581 1613 aa14.33□□□□□ -0.12
SMG9-207ENST00000598860 RGPD8O14715 1765 aaPredicted RBP14.32□□□□□ -0.12
SMG9-207ENST00000598860 TULP4Q9NRJ4 1543 aa14.32□□□□□ -0.12
SMG9-207ENST00000598860 PSME1Q06323 249 aa14.32□□□□□ -0.12
SMG9-207ENST00000598860 WASHC4Q2M389 1173 aa14.32□□□□□ -0.12
SMG9-207ENST00000598860 ZNF697Q5TEC3 545 aa14.32□□□□□ -0.12
SMG9-207ENST00000598860 ZNF598Q86UK7 904 aaKnown RBP14.32□□□□□ -0.12
SMG9-207ENST00000598860 ANKARQ7Z5J8 1434 aa14.32□□□□□ -0.12
SMG9-207ENST00000598860 ZNF772Q68DY9 489 aaPredicted RBP14.31□□□□□ -0.12
SMG9-207ENST00000598860 ARMC2Q8NEN0 867 aa14.31□□□□□ -0.12
SMG9-207ENST00000598860 PMFBP1Q8TBY8 1022 aa14.31□□□□□ -0.12
SMG9-207ENST00000598860 EVC2Q86UK5 1308 aa14.31□□□□□ -0.12
SMG9-207ENST00000598860 PXDNQ92626 1479 aa14.31□□□□□ -0.12
SMG9-207ENST00000598860 ADAMTS2O95450 1211 aa14.3□□□□□ -0.12
SMG9-207ENST00000598860 PUS7Q96PZ0 661 aaKnown RBP14.3□□□□□ -0.12
SMG9-207ENST00000598860 KIF1AQ12756 1690 aa14.3□□□□□ -0.12
SMG9-207ENST00000598860 SKOR1P84550 965 aa14.29□□□□□ -0.12
SMG9-207ENST00000598860 NGLY1Q96IV0 654 aa14.29□□□□□ -0.12
SMG9-207ENST00000598860 C8orf37Q96NL8 207 aa14.29□□□□□ -0.12
SMG9-207ENST00000598860 CDK19Q9BWU1 502 aa14.29□□□□□ -0.12
SMG9-207ENST00000598860 FKBPLQ9UIM3 349 aa14.29□□□□□ -0.12
SMG9-207ENST00000598860 MYOM1P52179 1685 aa14.29□□□□□ -0.12
SMG9-207ENST00000598860 TOPAZ1Q8N9V7 1692 aa14.29□□□□□ -0.12
SMG9-207ENST00000598860 SH3BP2P78314 561 aa14.28□□□□□ -0.12
SMG9-207ENST00000598860 SPATA31A3Q5VYP0 1347 aa14.28□□□□□ -0.12
SMG9-207ENST00000598860 ZNF511Q8NB15 262 aa14.28□□□□□ -0.12
SMG9-207ENST00000598860 ATAD2Q6PL18 1390 aa14.27□□□□□ -0.12
SMG9-207ENST00000598860 CCDC7Q96M83 1385 aa14.27□□□□□ -0.12
SMG9-207ENST00000598860 AFF2P51816 1311 aa14.27□□□□□ -0.12
SMG9-207ENST00000598860 PRR36Q9H6K5 1346 aa14.27□□□□□ -0.12
SMG9-207ENST00000598860 PDIA4P13667 645 aaKnown RBP14.27□□□□□ -0.13
SMG9-207ENST00000598860 VAC14Q08AM6 782 aa14.27□□□□□ -0.13
SMG9-207ENST00000598860 ADAMTS19Q8TE59 1207 aa14.27□□□□□ -0.13
SMG9-207ENST00000598860 NUDT16Q96DE0 195 aaKnown RBP14.27□□□□□ -0.13
SMG9-207ENST00000598860 NINLQ9Y2I6 1382 aa14.26□□□□□ -0.13
SMG9-207ENST00000598860 WNT7BP56706 349 aa14.26□□□□□ -0.13
SMG9-207ENST00000598860 HDGFL1Q5TGJ6 251 aa14.26□□□□□ -0.13
SMG9-207ENST00000598860 NBPF14Q5TI25 921 aa14.26□□□□□ -0.13
SMG9-207ENST00000598860 PNMA1Q8ND90 353 aa14.26□□□□□ -0.13
SMG9-207ENST00000598860 NGDNQ8NEJ9 315 aaKnown RBP14.26□□□□□ -0.13
SMG9-207ENST00000598860 KIF7Q2M1P5 1343 aa14.25□□□□□ -0.13
SMG9-207ENST00000598860 USP32Q8NFA0 1604 aa14.25□□□□□ -0.13
SMG9-207ENST00000598860 SBNO1A3KN83 1393 aa14.24□□□□□ -0.13
SMG9-207ENST00000598860 RXRBP28702 533 aa14.24□□□□□ -0.13
SMG9-207ENST00000598860 FOXC1Q12948 553 aa14.24□□□□□ -0.13
SMG9-207ENST00000598860 AKAP12Q02952 1782 aa14.24□□□□□ -0.13
SMG9-207ENST00000598860 ATP7BP35670 1465 aa14.24□□□□□ -0.13
SMG9-207ENST00000598860 COL22A1Q8NFW1 1626 aaPredicted RBP14.23□□□□□ -0.13
SMG9-207ENST00000598860 WASHC2AQ641Q2 1341 aa14.23□□□□□ -0.13
SMG9-207ENST00000598860 SRPK2P78362 688 aaKnown RBP14.23□□□□□ -0.13
SMG9-207ENST00000598860 RC3H1Q5TC82 1133 aaKnown RBP14.23□□□□□ -0.13
SMG9-207ENST00000598860 GPKOWQ92917 476 aaPredicted RBP eCLIP14.23□□□□□ -0.13
SMG9-207ENST00000598860 FOXJ1Q92949 421 aa14.23□□□□□ -0.13
SMG9-207ENST00000598860 QTRT2Q9H974 415 aaKnown RBP14.23□□□□□ -0.13
SMG9-207ENST00000598860 PODXL2Q9NZ53 605 aa14.23□□□□□ -0.13
SMG9-207ENST00000598860 TNS3Q68CZ2 1445 aa14.23□□□□□ -0.13
SMG9-207ENST00000598860 ZC3H4Q9UPT8 1303 aaKnown RBP14.22□□□□□ -0.13
SMG9-207ENST00000598860 AGERQ15109 404 aa14.22□□□□□ -0.13
SMG9-207ENST00000598860 ARHGEF10O15013 1369 aa14.22□□□□□ -0.13
SMG9-207ENST00000598860 C11orf95C9JLR9 678 aaPredicted RBP14.21□□□□□ -0.13
SMG9-207ENST00000598860 USP21Q9UK80 565 aa14.21□□□□□ -0.13
SMG9-207ENST00000598860 MON2Q7Z3U7 1717 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms