RNA–Protein interactions for RNA: ENST00000598812.5

ARHGEF1-217, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene ARHGEF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-217ENST00000598812 ST5P78524 1137 aa25.95■■□□□ 1.74
ARHGEF1-217ENST00000598812 TTLL6Q8N841 843 aa25.95■■□□□ 1.74
ARHGEF1-217ENST00000598812 ADAMTS8Q9UP79 889 aa25.95■■□□□ 1.74
ARHGEF1-217ENST00000598812 PDZRN3Q9UPQ7 1066 aa25.95■■□□□ 1.74
ARHGEF1-217ENST00000598812 WDR90Q96KV7 1748 aa25.94■■□□□ 1.74
ARHGEF1-217ENST00000598812 RGL2O15211 777 aa25.94■■□□□ 1.74
ARHGEF1-217ENST00000598812 CCDC24Q8N4L8 307 aa25.94■■□□□ 1.74
ARHGEF1-217ENST00000598812 BABAM1Q9NWV8 329 aa25.94■■□□□ 1.74
ARHGEF1-217ENST00000598812 NBPF5PQ86XG9 351 aaPredicted RBP25.93■■□□□ 1.74
ARHGEF1-217ENST00000598812 NGEFQ8N5V2 710 aa25.93■■□□□ 1.74
ARHGEF1-217ENST00000598812 ANKRD31Q8N7Z5 1873 aa25.93■■□□□ 1.74
ARHGEF1-217ENST00000598812 APLP1P51693 650 aa25.92■■□□□ 1.74
ARHGEF1-217ENST00000598812 C9orf131Q5VYM1 1079 aa25.91■■□□□ 1.74
ARHGEF1-217ENST00000598812 DNAJC5GQ8N7S2 189 aa25.91■■□□□ 1.74
ARHGEF1-217ENST00000598812 ZNF622Q969S3 477 aaKnown RBP eCLIP25.91■■□□□ 1.741e-8■□□□□ 9.7
ARHGEF1-217ENST00000598812 NIP7Q9Y221 180 aaKnown RBP eCLIP25.91■■□□□ 1.74
ARHGEF1-217ENST00000598812 MYL6BP14649 208 aa25.9■■□□□ 1.74
ARHGEF1-217ENST00000598812 KIF6Q6ZMV9 814 aa25.9■■□□□ 1.74
ARHGEF1-217ENST00000598812 ERBB4Q15303 1308 aa25.88■■□□□ 1.73
ARHGEF1-217ENST00000598812 HLFQ16534 295 aa25.88■■□□□ 1.73
ARHGEF1-217ENST00000598812 RNF181Q9P0P0 153 aa25.88■■□□□ 1.73
ARHGEF1-217ENST00000598812 TPTE2Q6XPS3 522 aa25.87■■□□□ 1.73
ARHGEF1-217ENST00000598812 TRIM35Q9UPQ4 493 aa25.87■■□□□ 1.73
ARHGEF1-217ENST00000598812 COL11A2P13942 1736 aaPredicted RBP25.86■■□□□ 1.73
ARHGEF1-217ENST00000598812 ERVV-1B6SEH8 477 aa25.86■■□□□ 1.73
ARHGEF1-217ENST00000598812 EIF2S2P20042 333 aaKnown RBP25.86■■□□□ 1.73
ARHGEF1-217ENST00000598812 LAS1LQ9Y4W2 734 aaKnown RBP25.86■■□□□ 1.73
ARHGEF1-217ENST00000598812 MAP3K15Q6ZN16 1313 aa25.86■■□□□ 1.73
ARHGEF1-217ENST00000598812 FAM177BA6PVY3 158 aa25.85■■□□□ 1.73
ARHGEF1-217ENST00000598812 TTLL7Q6ZT98 887 aa25.85■■□□□ 1.73
ARHGEF1-217ENST00000598812 CHL1O00533 1208 aa25.84■■□□□ 1.73
ARHGEF1-217ENST00000598812 RASSF7Q02833 373 aa25.84■■□□□ 1.73
ARHGEF1-217ENST00000598812 CNKSR1Q969H4 720 aa25.84■■□□□ 1.73
ARHGEF1-217ENST00000598812 SRGNP10124 158 aa25.83■■□□□ 1.73
ARHGEF1-217ENST00000598812 GTF2E1P29083 439 aaPredicted RBP25.83■■□□□ 1.73
ARHGEF1-217ENST00000598812 STYK1Q6J9G0 422 aa25.83■■□□□ 1.73
ARHGEF1-217ENST00000598812 ZBTB3Q9H5J0 574 aa25.83■■□□□ 1.73
ARHGEF1-217ENST00000598812 MASTLQ96GX5 879 aa25.82■■□□□ 1.72
ARHGEF1-217ENST00000598812 SBF1O95248 1867 aa25.82■■□□□ 1.72
ARHGEF1-217ENST00000598812 C21orf2O43822 256 aa25.81■■□□□ 1.72
ARHGEF1-217ENST00000598812 TOMM70O94826 608 aa25.81■■□□□ 1.72
ARHGEF1-217ENST00000598812 LMNB1P20700 586 aa25.81■■□□□ 1.72
ARHGEF1-217ENST00000598812 ZNF219Q9P2Y4 722 aaPredicted RBP25.81■■□□□ 1.72
ARHGEF1-217ENST00000598812 NUP98P52948 1817 aa25.81■■□□□ 1.72
ARHGEF1-217ENST00000598812 ZNF316A6NFI3 1004 aaPredicted RBP25.8■■□□□ 1.72
ARHGEF1-217ENST00000598812 NYXQ9GZU5 481 aa25.8■■□□□ 1.72
ARHGEF1-217ENST00000598812 APAF1O14727 1248 aa25.79■■□□□ 1.72
ARHGEF1-217ENST00000598812 PDIA6Q15084 440 aa25.79■■□□□ 1.72
ARHGEF1-217ENST00000598812 NPR1P16066 1061 aa25.78■■□□□ 1.72
ARHGEF1-217ENST00000598812 GPTP24298 496 aa25.78■■□□□ 1.72
ARHGEF1-217ENST00000598812 PRPF40BQ6NWY9 871 aaKnown RBP25.78■■□□□ 1.72
ARHGEF1-217ENST00000598812 NECTIN2Q92692 538 aa25.78■■□□□ 1.72
ARHGEF1-217ENST00000598812 KDM2BQ8NHM5 1336 aa25.78■■□□□ 1.72
ARHGEF1-217ENST00000598812 NFKBIEO00221 500 aa25.77■■□□□ 1.72
ARHGEF1-217ENST00000598812 PROSER3Q2NL68 480 aa25.77■■□□□ 1.72
ARHGEF1-217ENST00000598812 GIGYF2Q6Y7W6 1299 aaKnown RBP25.77■■□□□ 1.72
ARHGEF1-217ENST00000598812 CFAP44Q96MT7 982 aa25.77■■□□□ 1.72
ARHGEF1-217ENST00000598812 CACNA1SQ13698 1873 aa25.77■■□□□ 1.72
ARHGEF1-217ENST00000598812 KLRG2A4D1S0 409 aaPredicted RBP25.76■■□□□ 1.71
ARHGEF1-217ENST00000598812 ANXA1P04083 346 aa25.76■■□□□ 1.71
ARHGEF1-217ENST00000598812 KRT24Q2M2I5 525 aa25.76■■□□□ 1.71
ARHGEF1-217ENST00000598812 SOGA3Q5TF21 947 aa25.76■■□□□ 1.71
ARHGEF1-217ENST00000598812 LRP10Q7Z4F1 713 aa25.76■■□□□ 1.71
ARHGEF1-217ENST00000598812 NMRK2Q9NPI5 230 aa25.76■■□□□ 1.71
ARHGEF1-217ENST00000598812 ZC3H4Q9UPT8 1303 aaKnown RBP25.76■■□□□ 1.71
ARHGEF1-217ENST00000598812 SLX4Q8IY92 1834 aa25.76■■□□□ 1.71
ARHGEF1-217ENST00000598812 CALD1Q05682 793 aaKnown RBP25.75■■□□□ 1.71
ARHGEF1-217ENST00000598812 NUTM1Q86Y26 1132 aa25.75■■□□□ 1.71
ARHGEF1-217ENST00000598812 IBTKQ9P2D0 1353 aaPredicted RBP25.74■■□□□ 1.71
ARHGEF1-217ENST00000598812 UBN2Q6ZU65 1347 aa25.74■■□□□ 1.71
ARHGEF1-217ENST00000598812 COL13A1Q5TAT6 717 aaPredicted RBP25.74■■□□□ 1.71
ARHGEF1-217ENST00000598812 ARFGEF2Q9Y6D5 1785 aa25.74■■□□□ 1.71
ARHGEF1-217ENST00000598812 HOXB7P09629 217 aa25.73■■□□□ 1.71
ARHGEF1-217ENST00000598812 PRELPP51888 382 aa25.73■■□□□ 1.71
ARHGEF1-217ENST00000598812 ZNF34Q8IZ26 560 aa25.73■■□□□ 1.71
ARHGEF1-217ENST00000598812 JMYQ8N9B5 988 aa25.73■■□□□ 1.71
ARHGEF1-217ENST00000598812 TAOK3Q9H2K8 898 aa25.73■■□□□ 1.71
ARHGEF1-217ENST00000598812 DDX21Q9NR30 783 aaKnown RBP eCLIP25.73■■□□□ 1.71
ARHGEF1-217ENST00000598812 ABCC12Q96J65 1359 aa25.72■■□□□ 1.71
ARHGEF1-217ENST00000598812 AIMP1Q12904 312 aaKnown RBP25.72■■□□□ 1.71
ARHGEF1-217ENST00000598812 ERFEQ4G0M1 354 aa25.72■■□□□ 1.71
ARHGEF1-217ENST00000598812 PARP10Q53GL7 1025 aa25.72■■□□□ 1.71
ARHGEF1-217ENST00000598812 HDGFL1Q5TGJ6 251 aa25.72■■□□□ 1.71
ARHGEF1-217ENST00000598812 COPS6Q7L5N1 327 aa25.72■■□□□ 1.71
ARHGEF1-217ENST00000598812 XAGE3Q8WTP9 111 aa25.72■■□□□ 1.71
ARHGEF1-217ENST00000598812 MBIPQ9NS73 344 aa25.72■■□□□ 1.71
ARHGEF1-217ENST00000598812 FER1L6Q2WGJ9 1857 aa25.72■■□□□ 1.71
ARHGEF1-217ENST00000598812 CCDC88AQ3V6T2 1871 aa25.72■■□□□ 1.71
ARHGEF1-217ENST00000598812 ANP32CO43423 234 aa25.71■■□□□ 1.71
ARHGEF1-217ENST00000598812 CCDC184Q52MB2 194 aa25.71■■□□□ 1.71
ARHGEF1-217ENST00000598812 SUSD4Q5VX71 490 aa25.71■■□□□ 1.71
ARHGEF1-217ENST00000598812 PPP1R42Q7Z4L9 355 aa25.71■■□□□ 1.71
ARHGEF1-217ENST00000598812 KLRG1Q96E93 195 aa25.71■■□□□ 1.71
ARHGEF1-217ENST00000598812 IFT57Q9NWB7 429 aa25.71■■□□□ 1.71
ARHGEF1-217ENST00000598812 LTBP3Q9NS15 1303 aa25.7■■□□□ 1.71
ARHGEF1-217ENST00000598812 ALDH1B1P30837 517 aa25.7■■□□□ 1.7
ARHGEF1-217ENST00000598812 GNAI1P63096 354 aa25.7■■□□□ 1.7
ARHGEF1-217ENST00000598812 C16orf71Q8IYS4 520 aaPredicted RBP25.7■■□□□ 1.7
ARHGEF1-217ENST00000598812 RBM46Q8TBY0 533 aaKnown RBP25.7■■□□□ 1.7
ARHGEF1-217ENST00000598812 CHPF2Q9P2E5 772 aa25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms