RNA–Protein interactions for RNA: ENST00000598775.1

SPTBN4-213, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 3

Gene SPTBN4, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-213ENST00000598775 SRGNP10124 158 aa20.19■□□□□ 0.82
SPTBN4-213ENST00000598775 APLP1P51693 650 aa20.19■□□□□ 0.82
SPTBN4-213ENST00000598775 FER1L6Q2WGJ9 1857 aa20.19■□□□□ 0.82
SPTBN4-213ENST00000598775 ARFGEF2Q9Y6D5 1785 aa20.18■□□□□ 0.82
SPTBN4-213ENST00000598775 KLRG2A4D1S0 409 aaPredicted RBP20.18■□□□□ 0.82
SPTBN4-213ENST00000598775 PIP4K2AP48426 406 aaPredicted RBP20.18■□□□□ 0.82
SPTBN4-213ENST00000598775 FSTL1Q12841 308 aa20.18■□□□□ 0.82
SPTBN4-213ENST00000598775 CNKSR1Q969H4 720 aa20.18■□□□□ 0.82
SPTBN4-213ENST00000598775 ZNF622Q969S3 477 aaKnown RBP eCLIP20.18■□□□□ 0.82
SPTBN4-213ENST00000598775 LTBP3Q9NS15 1303 aa20.18■□□□□ 0.82
SPTBN4-213ENST00000598775 GLTPD2A6NH11 291 aa20.17■□□□□ 0.82
SPTBN4-213ENST00000598775 EIF4A1P60842 406 aaKnown RBP20.17■□□□□ 0.82
SPTBN4-213ENST00000598775 MASTLQ96GX5 879 aa20.17■□□□□ 0.82
SPTBN4-213ENST00000598775 MIS18AQ9NYP9 233 aa20.17■□□□□ 0.82
SPTBN4-213ENST00000598775 CCDC88AQ3V6T2 1871 aa20.17■□□□□ 0.82
SPTBN4-213ENST00000598775 NBPF5PQ86XG9 351 aaPredicted RBP20.16■□□□□ 0.82
SPTBN4-213ENST00000598775 MAPK8IP3Q9UPT6 1336 aa20.16■□□□□ 0.82
SPTBN4-213ENST00000598775 DICER1Q9UPY3 1922 aaKnown RBP20.15■□□□□ 0.82
SPTBN4-213ENST00000598775 ERVV-1B6SEH8 477 aa20.15■□□□□ 0.82
SPTBN4-213ENST00000598775 NPHP1O15259 732 aa20.15■□□□□ 0.82
SPTBN4-213ENST00000598775 SOGA3Q5TF21 947 aa20.15■□□□□ 0.82
SPTBN4-213ENST00000598775 TPTE2Q6XPS3 522 aa20.15■□□□□ 0.82
SPTBN4-213ENST00000598775 C16orf71Q8IYS4 520 aaPredicted RBP20.15■□□□□ 0.82
SPTBN4-213ENST00000598775 CCDC24Q8N4L8 307 aa20.15■□□□□ 0.82
SPTBN4-213ENST00000598775 RRAGCQ9HB90 399 aa20.15■□□□□ 0.82
SPTBN4-213ENST00000598775 TIAM2Q8IVF5 1701 aa20.15■□□□□ 0.82
SPTBN4-213ENST00000598775 SLX4Q8IY92 1834 aa20.14■□□□□ 0.81
SPTBN4-213ENST00000598775 C21orf2O43822 256 aa20.14■□□□□ 0.81
SPTBN4-213ENST00000598775 BABAM1Q9NWV8 329 aa20.14■□□□□ 0.81
SPTBN4-213ENST00000598775 NIP7Q9Y221 180 aaKnown RBP eCLIP20.14■□□□□ 0.81
SPTBN4-213ENST00000598775 ERBB4Q15303 1308 aa20.13■□□□□ 0.81
SPTBN4-213ENST00000598775 PRPF40BQ6NWY9 871 aaKnown RBP20.13■□□□□ 0.81
SPTBN4-213ENST00000598775 VEGFAP15692 232 aaPredicted RBP20.12■□□□□ 0.81
SPTBN4-213ENST00000598775 NPR1P16066 1061 aa20.12■□□□□ 0.81
SPTBN4-213ENST00000598775 HLFQ16534 295 aa20.12■□□□□ 0.81
SPTBN4-213ENST00000598775 DNAJC5GQ8N7S2 189 aa20.12■□□□□ 0.81
SPTBN4-213ENST00000598775 C7orf43Q8WVR3 580 aa20.12■□□□□ 0.81
SPTBN4-213ENST00000598775 THUMPD2Q9BTF0 503 aaKnown RBP20.11■□□□□ 0.81
SPTBN4-213ENST00000598775 TAOK3Q9H2K8 898 aa20.11■□□□□ 0.81
SPTBN4-213ENST00000598775 WDR90Q96KV7 1748 aa20.1■□□□□ 0.81
SPTBN4-213ENST00000598775 MAP3K15Q6ZN16 1313 aa20.1■□□□□ 0.81
SPTBN4-213ENST00000598775 NUP98P52948 1817 aa20.1■□□□□ 0.81
SPTBN4-213ENST00000598775 IBTKQ9P2D0 1353 aaPredicted RBP20.09■□□□□ 0.81
SPTBN4-213ENST00000598775 MYBBP1AQ9BQG0 1328 aaKnown RBP20.09■□□□□ 0.81
SPTBN4-213ENST00000598775 DPY19L2Q6NUT2 758 aa20.09■□□□□ 0.81
SPTBN4-213ENST00000598775 SMC1BQ8NDV3 1235 aa20.09■□□□□ 0.81
SPTBN4-213ENST00000598775 CACNA1SQ13698 1873 aa20.09■□□□□ 0.81
SPTBN4-213ENST00000598775 TMPOP42166 694 aaKnown RBP20.08■□□□□ 0.81
SPTBN4-213ENST00000598775 RIPK4P57078 832 aa20.08■□□□□ 0.81
SPTBN4-213ENST00000598775 LMOD3Q0VAK6 560 aa20.08■□□□□ 0.81
SPTBN4-213ENST00000598775 ERFEQ4G0M1 354 aa20.08■□□□□ 0.81
SPTBN4-213ENST00000598775 NYXQ9GZU5 481 aa20.08■□□□□ 0.81
SPTBN4-213ENST00000598775 RIC1Q4ADV7 1423 aa20.08■□□□□ 0.8
SPTBN4-213ENST00000598775 POTECB2RU33 542 aa20.07■□□□□ 0.8
SPTBN4-213ENST00000598775 CRY2Q49AN0 593 aa20.07■□□□□ 0.8
SPTBN4-213ENST00000598775 TSPYL4Q9UJ04 414 aa20.07■□□□□ 0.8
SPTBN4-213ENST00000598775 ALDH1B1P30837 517 aa20.06■□□□□ 0.8
SPTBN4-213ENST00000598775 DDX10Q13206 875 aaKnown RBP20.06■□□□□ 0.8
SPTBN4-213ENST00000598775 CCDC93Q567U6 631 aa20.06■□□□□ 0.8
SPTBN4-213ENST00000598775 KIF6Q6ZMV9 814 aa20.06■□□□□ 0.8
SPTBN4-213ENST00000598775 LRP10Q7Z4F1 713 aa20.06■□□□□ 0.8
SPTBN4-213ENST00000598775 ZNF219Q9P2Y4 722 aaPredicted RBP20.06■□□□□ 0.8
SPTBN4-213ENST00000598775 RRP7AQ9Y3A4 280 aaKnown RBP20.06■□□□□ 0.8
SPTBN4-213ENST00000598775 TTLL7Q6ZT98 887 aa20.05■□□□□ 0.8
SPTBN4-213ENST00000598775 GIGYF2Q6Y7W6 1299 aaKnown RBP20.04■□□□□ 0.8
SPTBN4-213ENST00000598775 ZNF34Q8IZ26 560 aa20.04■□□□□ 0.8
SPTBN4-213ENST00000598775 MYL6BP14649 208 aa20.03■□□□□ 0.8
SPTBN4-213ENST00000598775 GTF2E1P29083 439 aaPredicted RBP20.03■□□□□ 0.8
SPTBN4-213ENST00000598775 FKBP4Q02790 459 aaKnown RBP eCLIP20.03■□□□□ 0.8
SPTBN4-213ENST00000598775 PDIA6Q15084 440 aa20.03■□□□□ 0.8
SPTBN4-213ENST00000598775 RTKN2Q8IZC4 609 aa20.03■□□□□ 0.8
SPTBN4-213ENST00000598775 NGEFQ8N5V2 710 aa20.03■□□□□ 0.8
SPTBN4-213ENST00000598775 UBN2Q6ZU65 1347 aa20.02■□□□□ 0.8
SPTBN4-213ENST00000598775 HOXA10P31260 410 aaPredicted RBP20.02■□□□□ 0.8
SPTBN4-213ENST00000598775 SNED1Q8TER0 1413 aa20.02■□□□□ 0.79
SPTBN4-213ENST00000598775 ABCC12Q96J65 1359 aa20.01■□□□□ 0.79
SPTBN4-213ENST00000598775 FAM177BA6PVY3 158 aa20.01■□□□□ 0.79
SPTBN4-213ENST00000598775 RUNDC1Q96C34 613 aa20.01■□□□□ 0.79
SPTBN4-213ENST00000598775 PCNTO95613 3336 aa20■□□□□ 0.79
SPTBN4-213ENST00000598775 CHL1O00533 1208 aa20■□□□□ 0.79
SPTBN4-213ENST00000598775 PARP10Q53GL7 1025 aa20■□□□□ 0.79
SPTBN4-213ENST00000598775 CC2D2BQ6DHV5 1058 aa20■□□□□ 0.79
SPTBN4-213ENST00000598775 JMYQ8N9B5 988 aa20■□□□□ 0.79
SPTBN4-213ENST00000598775 KLRG1Q96E93 195 aa20■□□□□ 0.79
SPTBN4-213ENST00000598775 ZBTB3Q9H5J0 574 aa20■□□□□ 0.79
SPTBN4-213ENST00000598775 NTSR2O95665 410 aa19.99■□□□□ 0.79
SPTBN4-213ENST00000598775 GRIPAP1Q4V328 841 aa19.99■□□□□ 0.79
SPTBN4-213ENST00000598775 SUSD4Q5VX71 490 aa19.99■□□□□ 0.79
SPTBN4-213ENST00000598775 NUTM1Q86Y26 1132 aa19.99■□□□□ 0.79
SPTBN4-213ENST00000598775 L3MBTL3Q96JM7 780 aaPredicted RBP19.99■□□□□ 0.79
SPTBN4-213ENST00000598775 PSMD1Q99460 953 aa19.99■□□□□ 0.79
SPTBN4-213ENST00000598775 PPP1R42Q7Z4L9 355 aa19.98■□□□□ 0.79
SPTBN4-213ENST00000598775 TRIM35Q9UPQ4 493 aa19.98■□□□□ 0.79
SPTBN4-213ENST00000598775 RNF123Q5XPI4 1314 aa19.98■□□□□ 0.79
SPTBN4-213ENST00000598775 SCN4AP35499 1836 aa19.97■□□□□ 0.79
SPTBN4-213ENST00000598775 DDNO94850 711 aaPredicted RBP19.97■□□□□ 0.79
SPTBN4-213ENST00000598775 GPTP24298 496 aa19.97■□□□□ 0.79
SPTBN4-213ENST00000598775 WDR43Q15061 677 aaKnown RBP eCLIP19.97■□□□□ 0.79
SPTBN4-213ENST00000598775 IFFO2Q5TF58 517 aa19.97■□□□□ 0.79
SPTBN4-213ENST00000598775 CRAMP1Q96RY5 1269 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms