RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 ERVV-1B6SEH8 477 aa19.75■□□□□ 0.75
LIG1-215ENST00000597901 CHL1O00533 1208 aa19.75■□□□□ 0.75
LIG1-215ENST00000597901 EIF2S2P20042 333 aaKnown RBP19.75■□□□□ 0.75
LIG1-215ENST00000597901 ST5P78524 1137 aa19.75■□□□□ 0.75
LIG1-215ENST00000597901 TPTE2Q6XPS3 522 aa19.75■□□□□ 0.75
LIG1-215ENST00000597901 TTLL7Q6ZT98 887 aa19.75■□□□□ 0.75
LIG1-215ENST00000597901 LAS1LQ9Y4W2 734 aaKnown RBP19.74■□□□□ 0.75
LIG1-215ENST00000597901 NRXN2Q9P2S2 1712 aa19.73■□□□□ 0.75
LIG1-215ENST00000597901 DLG5Q8TDM6 1919 aa19.73■□□□□ 0.75
LIG1-215ENST00000597901 ZNF316A6NFI3 1004 aaPredicted RBP19.73■□□□□ 0.75
LIG1-215ENST00000597901 FAM177BA6PVY3 158 aa19.72■□□□□ 0.75
LIG1-215ENST00000597901 SRGNP10124 158 aa19.72■□□□□ 0.75
LIG1-215ENST00000597901 PDIA6Q15084 440 aa19.72■□□□□ 0.75
LIG1-215ENST00000597901 KIF6Q6ZMV9 814 aa19.72■□□□□ 0.75
LIG1-215ENST00000597901 ERBB4Q15303 1308 aa19.72■□□□□ 0.75
LIG1-215ENST00000597901 MAP3K15Q6ZN16 1313 aa19.72■□□□□ 0.75
LIG1-215ENST00000597901 AFDNP55196 1824 aaKnown RBP19.72■□□□□ 0.75
LIG1-215ENST00000597901 APAF1O14727 1248 aa19.71■□□□□ 0.75
LIG1-215ENST00000597901 STYK1Q6J9G0 422 aa19.71■□□□□ 0.75
LIG1-215ENST00000597901 RNF181Q9P0P0 153 aa19.71■□□□□ 0.75
LIG1-215ENST00000597901 CCDC184Q52MB2 194 aa19.7■□□□□ 0.74
LIG1-215ENST00000597901 LRP10Q7Z4F1 713 aa19.7■□□□□ 0.74
LIG1-215ENST00000597901 CNKSR1Q969H4 720 aa19.7■□□□□ 0.74
LIG1-215ENST00000597901 MASTLQ96GX5 879 aa19.7■□□□□ 0.74
LIG1-215ENST00000597901 ZBTB3Q9H5J0 574 aa19.7■□□□□ 0.74
LIG1-215ENST00000597901 ZNF219Q9P2Y4 722 aaPredicted RBP19.7■□□□□ 0.74
LIG1-215ENST00000597901 KLRG2A4D1S0 409 aaPredicted RBP19.69■□□□□ 0.74
LIG1-215ENST00000597901 KIF3CO14782 793 aa19.69■□□□□ 0.74
LIG1-215ENST00000597901 C21orf2O43822 256 aa19.69■□□□□ 0.74
LIG1-215ENST00000597901 GTF2E1P29083 439 aaPredicted RBP19.69■□□□□ 0.74
LIG1-215ENST00000597901 RASSF7Q02833 373 aa19.69■□□□□ 0.74
LIG1-215ENST00000597901 KRT24Q2M2I5 525 aa19.69■□□□□ 0.74
LIG1-215ENST00000597901 KDM3BQ7LBC6 1761 aa19.68■□□□□ 0.74
LIG1-215ENST00000597901 ANXA1P04083 346 aa19.68■□□□□ 0.74
LIG1-215ENST00000597901 PRELPP51888 382 aa19.68■□□□□ 0.74
LIG1-215ENST00000597901 PROSER3Q2NL68 480 aa19.68■□□□□ 0.74
LIG1-215ENST00000597901 NECTIN2Q92692 538 aa19.68■□□□□ 0.74
LIG1-215ENST00000597901 CFAP44Q96MT7 982 aa19.68■□□□□ 0.74
LIG1-215ENST00000597901 BRCA1P38398 1863 aaKnown RBP19.68■□□□□ 0.74
LIG1-215ENST00000597901 SCN7AQ01118 1682 aa19.68■□□□□ 0.74
LIG1-215ENST00000597901 LMNB1P20700 586 aa19.67■□□□□ 0.74
LIG1-215ENST00000597901 GIGYF2Q6Y7W6 1299 aaKnown RBP19.67■□□□□ 0.74
LIG1-215ENST00000597901 ZNF34Q8IZ26 560 aa19.67■□□□□ 0.74
LIG1-215ENST00000597901 NYXQ9GZU5 481 aa19.67■□□□□ 0.74
LIG1-215ENST00000597901 NFKBIEO00221 500 aa19.66■□□□□ 0.74
LIG1-215ENST00000597901 NPR1P16066 1061 aa19.66■□□□□ 0.74
LIG1-215ENST00000597901 GPTP24298 496 aa19.66■□□□□ 0.74
LIG1-215ENST00000597901 SUSD4Q5VX71 490 aa19.65■□□□□ 0.74
LIG1-215ENST00000597901 PRPF40BQ6NWY9 871 aaKnown RBP19.65■□□□□ 0.74
LIG1-215ENST00000597901 COPS6Q7L5N1 327 aa19.65■□□□□ 0.74
LIG1-215ENST00000597901 NUTM1Q86Y26 1132 aa19.65■□□□□ 0.74
LIG1-215ENST00000597901 NMRK2Q9NPI5 230 aa19.65■□□□□ 0.74
LIG1-215ENST00000597901 ZNF853P0CG23 659 aa19.64■□□□□ 0.73
LIG1-215ENST00000597901 AIMP1Q12904 312 aaKnown RBP19.64■□□□□ 0.73
LIG1-215ENST00000597901 ERFEQ4G0M1 354 aa19.64■□□□□ 0.73
LIG1-215ENST00000597901 C7orf43Q8WVR3 580 aa19.64■□□□□ 0.73
LIG1-215ENST00000597901 DDX21Q9NR30 783 aaKnown RBP eCLIP19.64■□□□□ 0.73
LIG1-215ENST00000597901 ARFGEF1Q9Y6D6 1849 aa19.64■□□□□ 0.73
LIG1-215ENST00000597901 UBN2Q6ZU65 1347 aa19.63■□□□□ 0.73
LIG1-215ENST00000597901 HSPA6P17066 643 aa19.63■□□□□ 0.73
LIG1-215ENST00000597901 XAGE3Q8WTP9 111 aa19.63■□□□□ 0.73
LIG1-215ENST00000597901 MBIPQ9NS73 344 aa19.63■□□□□ 0.73
LIG1-215ENST00000597901 ANP32CO43423 234 aa19.62■□□□□ 0.73
LIG1-215ENST00000597901 ALDH1B1P30837 517 aa19.62■□□□□ 0.73
LIG1-215ENST00000597901 CALD1Q05682 793 aaKnown RBP19.62■□□□□ 0.73
LIG1-215ENST00000597901 C16orf71Q8IYS4 520 aaPredicted RBP19.62■□□□□ 0.73
LIG1-215ENST00000597901 BCORQ6W2J9 1755 aa19.62■□□□□ 0.73
LIG1-215ENST00000597901 KDM2BQ8NHM5 1336 aa19.61■□□□□ 0.73
LIG1-215ENST00000597901 HOXB7P09629 217 aa19.61■□□□□ 0.73
LIG1-215ENST00000597901 GNAI1P63096 354 aa19.61■□□□□ 0.73
LIG1-215ENST00000597901 PARP10Q53GL7 1025 aa19.61■□□□□ 0.73
LIG1-215ENST00000597901 SOGA3Q5TF21 947 aa19.61■□□□□ 0.73
LIG1-215ENST00000597901 HDGFL1Q5TGJ6 251 aa19.61■□□□□ 0.73
LIG1-215ENST00000597901 DUSP27Q5VZP5 1158 aa19.61■□□□□ 0.73
LIG1-215ENST00000597901 PPP1R42Q7Z4L9 355 aa19.61■□□□□ 0.73
LIG1-215ENST00000597901 RRAGCQ9HB90 399 aa19.61■□□□□ 0.73
LIG1-215ENST00000597901 IFT57Q9NWB7 429 aa19.61■□□□□ 0.73
LIG1-215ENST00000597901 ANKRD31Q8N7Z5 1873 aa19.6■□□□□ 0.73
LIG1-215ENST00000597901 TOMM70O94826 608 aa19.6■□□□□ 0.73
LIG1-215ENST00000597901 CHPF2Q9P2E5 772 aa19.6■□□□□ 0.73
LIG1-215ENST00000597901 ZC3H4Q9UPT8 1303 aaKnown RBP19.59■□□□□ 0.73
LIG1-215ENST00000597901 NTSR2O95665 410 aa19.59■□□□□ 0.73
LIG1-215ENST00000597901 TCIRG1Q13488 830 aa19.59■□□□□ 0.73
LIG1-215ENST00000597901 CRY2Q49AN0 593 aa19.59■□□□□ 0.73
LIG1-215ENST00000597901 UTP14AQ9BVJ6 771 aaKnown RBP19.59■□□□□ 0.73
LIG1-215ENST00000597901 TAOK3Q9H2K8 898 aa19.59■□□□□ 0.73
LIG1-215ENST00000597901 LAMB4A4D0S4 1761 aa19.59■□□□□ 0.73
LIG1-215ENST00000597901 LTBP3Q9NS15 1303 aa19.58■□□□□ 0.73
LIG1-215ENST00000597901 GLTPD2A6NH11 291 aa19.58■□□□□ 0.72
LIG1-215ENST00000597901 HSP90AB3PQ58FF7 597 aa19.58■□□□□ 0.72
LIG1-215ENST00000597901 SLC10A5Q5PT55 438 aa19.58■□□□□ 0.72
LIG1-215ENST00000597901 DBF4Q9UBU7 674 aaPredicted RBP19.58■□□□□ 0.72
LIG1-215ENST00000597901 ELL2O00472 640 aaPredicted RBP19.57■□□□□ 0.72
LIG1-215ENST00000597901 HOXA10P31260 410 aaPredicted RBP19.57■□□□□ 0.72
LIG1-215ENST00000597901 CCDC93Q567U6 631 aa19.57■□□□□ 0.72
LIG1-215ENST00000597901 ANKRD13DQ6ZTN6 518 aa19.57■□□□□ 0.72
LIG1-215ENST00000597901 MRS2Q9HD23 443 aa19.57■□□□□ 0.72
LIG1-215ENST00000597901 ABCC12Q96J65 1359 aa19.57■□□□□ 0.72
LIG1-215ENST00000597901 IBTKQ9P2D0 1353 aaPredicted RBP19.57■□□□□ 0.72
LIG1-215ENST00000597901 DPY19L2Q6NUT2 758 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms