RNA–Protein interactions for RNA: ENST00000597756.1

NOTCH3-204, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 559 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-204ENST00000597756 KLHL34Q8N239 644 aa16.29■□□□□ 0.2
NOTCH3-204ENST00000597756 SPINK5Q9NQ38 1064 aaPredicted RBP16.29■□□□□ 0.2
NOTCH3-204ENST00000597756 ANXA1P04083 346 aa16.28■□□□□ 0.2
NOTCH3-204ENST00000597756 HDGFL1Q5TGJ6 251 aa16.28■□□□□ 0.2
NOTCH3-204ENST00000597756 TSPYL6Q8N831 410 aa16.28■□□□□ 0.2
NOTCH3-204ENST00000597756 TSR2Q969E8 191 aaKnown RBP16.28■□□□□ 0.2
NOTCH3-204ENST00000597756 BRCA1P38398 1863 aaKnown RBP16.28■□□□□ 0.2
NOTCH3-204ENST00000597756 N4BP2Q86UW6 1770 aaPredicted RBP16.28■□□□□ 0.2
NOTCH3-204ENST00000597756 UTRNP46939 3433 aa16.28■□□□□ 0.2
NOTCH3-204ENST00000597756 GOLGB1Q14789 3259 aaKnown RBP16.27■□□□□ 0.2
NOTCH3-204ENST00000597756 KCNA3P22001 575 aa16.27■□□□□ 0.2
NOTCH3-204ENST00000597756 NECTIN2Q92692 538 aa16.27■□□□□ 0.2
NOTCH3-204ENST00000597756 SETDB2Q96T68 719 aa16.27■□□□□ 0.2
NOTCH3-204ENST00000597756 PXDNLA1KZ92 1463 aa16.27■□□□□ 0.19
NOTCH3-204ENST00000597756 ELL2O00472 640 aaPredicted RBP16.26■□□□□ 0.19
NOTCH3-204ENST00000597756 GIGYF2Q6Y7W6 1299 aaKnown RBP16.26■□□□□ 0.19
NOTCH3-204ENST00000597756 BICDL1Q6ZP65 573 aa16.26■□□□□ 0.19
NOTCH3-204ENST00000597756 COPS6Q7L5N1 327 aa16.26■□□□□ 0.19
NOTCH3-204ENST00000597756 CHPF2Q9P2E5 772 aa16.26■□□□□ 0.19
NOTCH3-204ENST00000597756 DBF4Q9UBU7 674 aaPredicted RBP16.26■□□□□ 0.19
NOTCH3-204ENST00000597756 ZNF652Q9Y2D9 606 aa16.26■□□□□ 0.19
NOTCH3-204ENST00000597756 ANKRD31Q8N7Z5 1873 aa16.26■□□□□ 0.19
NOTCH3-204ENST00000597756 CACNA1FO60840 1977 aa16.26■□□□□ 0.19
NOTCH3-204ENST00000597756 CARMIL3Q8ND23 1372 aa16.26■□□□□ 0.19
NOTCH3-204ENST00000597756 PRR5LQ6MZQ0 368 aa16.25■□□□□ 0.19
NOTCH3-204ENST00000597756 FANCIQ9NVI1 1328 aa16.24■□□□□ 0.19
NOTCH3-204ENST00000597756 A0A0G2JLW4 131 aa16.24■□□□□ 0.19
NOTCH3-204ENST00000597756 YBX3P16989 372 aaKnown RBP eCLIP16.24■□□□□ 0.19
NOTCH3-204ENST00000597756 KIF6Q6ZMV9 814 aa16.24■□□□□ 0.19
NOTCH3-204ENST00000597756 ZNF34Q8IZ26 560 aa16.24■□□□□ 0.19
NOTCH3-204ENST00000597756 XAGE3Q8WTP9 111 aa16.24■□□□□ 0.19
NOTCH3-204ENST00000597756 CHMP4AQ9BY43 222 aa16.24■□□□□ 0.19
NOTCH3-204ENST00000597756 HYPKQ9NX55 129 aa16.24■□□□□ 0.19
NOTCH3-204ENST00000597756 ATP10DQ9P241 1426 aa16.24■□□□□ 0.19
NOTCH3-204ENST00000597756 DPEP1P16444 411 aa16.23■□□□□ 0.19
NOTCH3-204ENST00000597756 ZBTB3Q9H5J0 574 aa16.23■□□□□ 0.19
NOTCH3-204ENST00000597756 NIP7Q9Y221 180 aaKnown RBP eCLIP16.23■□□□□ 0.19
NOTCH3-204ENST00000597756 CHD4Q14839 1912 aa16.23■□□□□ 0.19
NOTCH3-204ENST00000597756 DCAF8L1A6NGE4 600 aa16.22■□□□□ 0.19
NOTCH3-204ENST00000597756 VAMP4O75379 141 aa16.22■□□□□ 0.19
NOTCH3-204ENST00000597756 TWISTNBQ3B726 338 aaPredicted RBP16.22■□□□□ 0.19
NOTCH3-204ENST00000597756 CCDC30Q5VVM6 783 aa16.22■□□□□ 0.19
NOTCH3-204ENST00000597756 BRIP1Q9BX63 1249 aa16.22■□□□□ 0.19
NOTCH3-204ENST00000597756 ANKRD36CQ5JPF3 1778 aa16.21■□□□□ 0.19
NOTCH3-204ENST00000597756 DLEC1Q9Y238 1755 aa16.21■□□□□ 0.19
NOTCH3-204ENST00000597756 EXOSC9Q06265 439 aaKnown RBP16.21■□□□□ 0.19
NOTCH3-204ENST00000597756 GOLGA2Q08379 1002 aa16.21■□□□□ 0.19
NOTCH3-204ENST00000597756 GPR162Q16538 588 aa16.21■□□□□ 0.19
NOTCH3-204ENST00000597756 UBN2Q6ZU65 1347 aa16.2■□□□□ 0.18
NOTCH3-204ENST00000597756 ARFGEF1Q9Y6D6 1849 aa16.2■□□□□ 0.18
NOTCH3-204ENST00000597756 KLRG2A4D1S0 409 aaPredicted RBP16.2■□□□□ 0.18
NOTCH3-204ENST00000597756 AIMP1Q12904 312 aaKnown RBP16.2■□□□□ 0.18
NOTCH3-204ENST00000597756 TCIRG1Q13488 830 aa16.2■□□□□ 0.18
NOTCH3-204ENST00000597756 TPTE2Q6XPS3 522 aa16.2■□□□□ 0.18
NOTCH3-204ENST00000597756 ANKRD13DQ6ZTN6 518 aa16.2■□□□□ 0.18
NOTCH3-204ENST00000597756 TRMT2AQ8IZ69 625 aaKnown RBP16.2■□□□□ 0.18
NOTCH3-204ENST00000597756 PLBD2Q8NHP8 589 aa16.2■□□□□ 0.18
NOTCH3-204ENST00000597756 MYH16Q9H6N6 1097 aa16.2■□□□□ 0.18
NOTCH3-204ENST00000597756 PHAXQ9H814 394 aaKnown RBP16.2■□□□□ 0.18
NOTCH3-204ENST00000597756 IBTKQ9P2D0 1353 aaPredicted RBP16.19■□□□□ 0.18
NOTCH3-204ENST00000597756 GRIN3BO60391 1043 aa16.19■□□□□ 0.18
NOTCH3-204ENST00000597756 CHRNA5P30532 468 aa16.19■□□□□ 0.18
NOTCH3-204ENST00000597756 SLFN5Q08AF3 891 aa16.19■□□□□ 0.18
NOTCH3-204ENST00000597756 NBPF5PQ86XG9 351 aaPredicted RBP16.19■□□□□ 0.18
NOTCH3-204ENST00000597756 CNBD1Q8NA66 436 aa16.19■□□□□ 0.18
NOTCH3-204ENST00000597756 PDZRN3Q9UPQ7 1066 aa16.19■□□□□ 0.18
NOTCH3-204ENST00000597756 PARP10Q53GL7 1025 aa16.18■□□□□ 0.18
NOTCH3-204ENST00000597756 HSP90AB3PQ58FF7 597 aa16.18■□□□□ 0.18
NOTCH3-204ENST00000597756 SUSD4Q5VX71 490 aa16.18■□□□□ 0.18
NOTCH3-204ENST00000597756 CCDC24Q8N4L8 307 aa16.18■□□□□ 0.18
NOTCH3-204ENST00000597756 PIM2Q9P1W9 311 aa16.18■□□□□ 0.18
NOTCH3-204ENST00000597756 E9PSI1 815 aa16.17■□□□□ 0.18
NOTCH3-204ENST00000597756 GPTP24298 496 aa16.17■□□□□ 0.18
NOTCH3-204ENST00000597756 PDE6BP35913 854 aa16.17■□□□□ 0.18
NOTCH3-204ENST00000597756 TRIM28Q13263 835 aaKnown RBP16.17■□□□□ 0.18
NOTCH3-204ENST00000597756 ISCA1Q9BUE6 129 aa16.17■□□□□ 0.18
NOTCH3-204ENST00000597756 ARFGEF2Q9Y6D5 1785 aa16.17■□□□□ 0.18
NOTCH3-204ENST00000597756 H0YIN7 160 aa16.16■□□□□ 0.18
NOTCH3-204ENST00000597756 NTSR2O95665 410 aa16.16■□□□□ 0.18
NOTCH3-204ENST00000597756 ST5P78524 1137 aa16.16■□□□□ 0.18
NOTCH3-204ENST00000597756 SLC10A5Q5PT55 438 aa16.16■□□□□ 0.18
NOTCH3-204ENST00000597756 NLRP10Q86W26 655 aa16.16■□□□□ 0.18
NOTCH3-204ENST00000597756 C2CD5Q86YS7 1000 aa16.16■□□□□ 0.18
NOTCH3-204ENST00000597756 NYXQ9GZU5 481 aa16.16■□□□□ 0.18
NOTCH3-204ENST00000597756 COL11A2P13942 1736 aaPredicted RBP16.16■□□□□ 0.18
NOTCH3-204ENST00000597756 SLC4A2P04920 1241 aa16.15■□□□□ 0.18
NOTCH3-204ENST00000597756 SRGNP10124 158 aa16.15■□□□□ 0.18
NOTCH3-204ENST00000597756 RIC1Q4ADV7 1423 aa16.15■□□□□ 0.18
NOTCH3-204ENST00000597756 G2E3Q7L622 706 aa16.15■□□□□ 0.18
NOTCH3-204ENST00000597756 PELP1Q8IZL8 1130 aaKnown RBP16.15■□□□□ 0.18
NOTCH3-204ENST00000597756 CDCA7LQ96GN5 454 aa16.15■□□□□ 0.18
NOTCH3-204ENST00000597756 FAM177BA6PVY3 158 aa16.14■□□□□ 0.17
NOTCH3-204ENST00000597756 TCERG1O14776 1098 aaKnown RBP16.14■□□□□ 0.17
NOTCH3-204ENST00000597756 ERFEQ4G0M1 354 aa16.14■□□□□ 0.17
NOTCH3-204ENST00000597756 DALRD3Q5D0E6 543 aaKnown RBP16.14■□□□□ 0.17
NOTCH3-204ENST00000597756 PPP1R42Q7Z4L9 355 aa16.14■□□□□ 0.17
NOTCH3-204ENST00000597756 STK31Q9BXU1 1019 aa16.14■□□□□ 0.17
NOTCH3-204ENST00000597756 WWC3Q9ULE0 1092 aa16.14■□□□□ 0.17
NOTCH3-204ENST00000597756 BCS1LQ9Y276 419 aa16.14■□□□□ 0.17
NOTCH3-204ENST00000597756 NUTM1Q86Y26 1132 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms