RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 ARFGEF2Q9Y6D5 1785 aa14.33□□□□□ -0.12
SHKBP1-206ENST00000595523 ANXA1P04083 346 aa14.33□□□□□ -0.12
SHKBP1-206ENST00000595523 HLFQ16534 295 aa14.33□□□□□ -0.12
SHKBP1-206ENST00000595523 CLEC4GQ6UXB4 293 aa14.33□□□□□ -0.12
SHKBP1-206ENST00000595523 TTLL7Q6ZT98 887 aa14.33□□□□□ -0.12
SHKBP1-206ENST00000595523 WWC1Q8IX03 1113 aa14.33□□□□□ -0.12
SHKBP1-206ENST00000595523 NGEFQ8N5V2 710 aa14.33□□□□□ -0.12
SHKBP1-206ENST00000595523 TNRC6CQ9HCJ0 1690 aaKnown RBP14.33□□□□□ -0.12
SHKBP1-206ENST00000595523 RGL2O15211 777 aa14.32□□□□□ -0.12
SHKBP1-206ENST00000595523 GNAI1P63096 354 aa14.32□□□□□ -0.12
SHKBP1-206ENST00000595523 NCBP3Q53F19 620 aaKnown RBP14.32□□□□□ -0.12
SHKBP1-206ENST00000595523 PRR5LQ6MZQ0 368 aa14.32□□□□□ -0.12
SHKBP1-206ENST00000595523 FAM9BQ8IZU0 186 aa14.32□□□□□ -0.12
SHKBP1-206ENST00000595523 NECTIN2Q92692 538 aa14.32□□□□□ -0.12
SHKBP1-206ENST00000595523 SBF1O95248 1867 aa14.31□□□□□ -0.12
SHKBP1-206ENST00000595523 CHRNA5P30532 468 aa14.31□□□□□ -0.12
SHKBP1-206ENST00000595523 CALD1Q05682 793 aaKnown RBP14.31□□□□□ -0.12
SHKBP1-206ENST00000595523 SETDB2Q96T68 719 aa14.31□□□□□ -0.12
SHKBP1-206ENST00000595523 MAP3K15Q6ZN16 1313 aa14.31□□□□□ -0.12
SHKBP1-206ENST00000595523 ATP10DQ9P241 1426 aa14.31□□□□□ -0.12
SHKBP1-206ENST00000595523 CACNA1FO60840 1977 aa14.31□□□□□ -0.12
SHKBP1-206ENST00000595523 ERVV-1B6SEH8 477 aa14.3□□□□□ -0.12
SHKBP1-206ENST00000595523 HOXB7P09629 217 aa14.3□□□□□ -0.12
SHKBP1-206ENST00000595523 DUSP27Q5VZP5 1158 aa14.3□□□□□ -0.12
SHKBP1-206ENST00000595523 CCDC24Q8N4L8 307 aa14.3□□□□□ -0.12
SHKBP1-206ENST00000595523 ZNF652Q9Y2D9 606 aa14.3□□□□□ -0.12
SHKBP1-206ENST00000595523 CCDC88AQ3V6T2 1871 aa14.29□□□□□ -0.12
SHKBP1-206ENST00000595523 GRIN3BO60391 1043 aa14.29□□□□□ -0.12
SHKBP1-206ENST00000595523 YY1P25490 414 aa14.29□□□□□ -0.12
SHKBP1-206ENST00000595523 C8orf58Q8NAV2 365 aa14.29□□□□□ -0.12
SHKBP1-206ENST00000595523 TSR2Q969E8 191 aaKnown RBP14.29□□□□□ -0.12
SHKBP1-206ENST00000595523 ZBTB3Q9H5J0 574 aa14.29□□□□□ -0.12
SHKBP1-206ENST00000595523 DDX21Q9NR30 783 aaKnown RBP eCLIP14.29□□□□□ -0.12
SHKBP1-206ENST00000595523 CHPF2Q9P2E5 772 aa14.29□□□□□ -0.12
SHKBP1-206ENST00000595523 LAMB2P55268 1798 aa14.29□□□□□ -0.12
SHKBP1-206ENST00000595523 SLX4Q8IY92 1834 aa14.29□□□□□ -0.12
SHKBP1-206ENST00000595523 IL16Q14005 1332 aa14.28□□□□□ -0.12
SHKBP1-206ENST00000595523 HDGFL1Q5TGJ6 251 aa14.28□□□□□ -0.12
SHKBP1-206ENST00000595523 KIF6Q6ZMV9 814 aa14.28□□□□□ -0.12
SHKBP1-206ENST00000595523 CNBD1Q8NA66 436 aa14.28□□□□□ -0.12
SHKBP1-206ENST00000595523 NIP7Q9Y221 180 aaKnown RBP eCLIP14.28□□□□□ -0.12
SHKBP1-206ENST00000595523 SALL2Q9Y467 1007 aaPredicted RBP14.28□□□□□ -0.12
SHKBP1-206ENST00000595523 UBN2Q6ZU65 1347 aa14.27□□□□□ -0.12
SHKBP1-206ENST00000595523 ELL2O00472 640 aaPredicted RBP14.27□□□□□ -0.13
SHKBP1-206ENST00000595523 TSPYL6Q8N831 410 aa14.27□□□□□ -0.13
SHKBP1-206ENST00000595523 XAGE3Q8WTP9 111 aa14.27□□□□□ -0.13
SHKBP1-206ENST00000595523 BCS1LQ9Y276 419 aa14.27□□□□□ -0.13
SHKBP1-206ENST00000595523 FER1L6Q2WGJ9 1857 aa14.27□□□□□ -0.13
SHKBP1-206ENST00000595523 GIGYF2Q6Y7W6 1299 aaKnown RBP14.26□□□□□ -0.13
SHKBP1-206ENST00000595523 COPS6Q7L5N1 327 aa14.26□□□□□ -0.13
SHKBP1-206ENST00000595523 NBPF5PQ86XG9 351 aaPredicted RBP14.26□□□□□ -0.13
SHKBP1-206ENST00000595523 ZNF34Q8IZ26 560 aa14.26□□□□□ -0.13
SHKBP1-206ENST00000595523 BRIP1Q9BX63 1249 aa14.26□□□□□ -0.13
SHKBP1-206ENST00000595523 PIM2Q9P1W9 311 aa14.26□□□□□ -0.13
SHKBP1-206ENST00000595523 ABCC12Q96J65 1359 aa14.25□□□□□ -0.13
SHKBP1-206ENST00000595523 DDX60Q8IY21 1712 aaKnown RBP14.25□□□□□ -0.13
SHKBP1-206ENST00000595523 GPTP24298 496 aa14.25□□□□□ -0.13
SHKBP1-206ENST00000595523 AIMP1Q12904 312 aaKnown RBP14.25□□□□□ -0.13
SHKBP1-206ENST00000595523 C2CD5Q86YS7 1000 aa14.25□□□□□ -0.13
SHKBP1-206ENST00000595523 SPINK5Q9NQ38 1064 aaPredicted RBP14.25□□□□□ -0.13
SHKBP1-206ENST00000595523 DBF4Q9UBU7 674 aaPredicted RBP14.25□□□□□ -0.13
SHKBP1-206ENST00000595523 IBTKQ9P2D0 1353 aaPredicted RBP14.24□□□□□ -0.13
SHKBP1-206ENST00000595523 ZNF521Q96K83 1311 aa14.24□□□□□ -0.13
SHKBP1-206ENST00000595523 FANCIQ9NVI1 1328 aa14.24□□□□□ -0.13
SHKBP1-206ENST00000595523 FAM177BA6PVY3 158 aa14.24□□□□□ -0.13
SHKBP1-206ENST00000595523 CCER2I3L3R5 266 aa14.24□□□□□ -0.13
SHKBP1-206ENST00000595523 DALRD3Q5D0E6 543 aaKnown RBP14.24□□□□□ -0.13
SHKBP1-206ENST00000595523 WDR63Q8IWG1 891 aa14.24□□□□□ -0.13
SHKBP1-206ENST00000595523 ADCY9O60503 1353 aa14.23□□□□□ -0.13
SHKBP1-206ENST00000595523 PDE6BP35913 854 aa14.23□□□□□ -0.13
SHKBP1-206ENST00000595523 ST5P78524 1137 aa14.23□□□□□ -0.13
SHKBP1-206ENST00000595523 SUSD4Q5VX71 490 aa14.23□□□□□ -0.13
SHKBP1-206ENST00000595523 DICER1Q9UPY3 1922 aaKnown RBP14.23□□□□□ -0.13
SHKBP1-206ENST00000595523 KLRG2A4D1S0 409 aaPredicted RBP14.22□□□□□ -0.13
SHKBP1-206ENST00000595523 H0YIN7 160 aa14.22□□□□□ -0.13
SHKBP1-206ENST00000595523 NTSR2O95665 410 aa14.22□□□□□ -0.13
SHKBP1-206ENST00000595523 SRGNP10124 158 aa14.22□□□□□ -0.13
SHKBP1-206ENST00000595523 TPTE2Q6XPS3 522 aa14.22□□□□□ -0.13
SHKBP1-206ENST00000595523 NUTM1Q86Y26 1132 aa14.22□□□□□ -0.13
SHKBP1-206ENST00000595523 PHAXQ9H814 394 aaKnown RBP14.22□□□□□ -0.13
SHKBP1-206ENST00000595523 HYPKQ9NX55 129 aa14.22□□□□□ -0.13
SHKBP1-206ENST00000595523 TAF1P21675 1872 aa14.22□□□□□ -0.13
SHKBP1-206ENST00000595523 RIC1Q4ADV7 1423 aa14.22□□□□□ -0.13
SHKBP1-206ENST00000595523 NPHP1O15259 732 aa14.21□□□□□ -0.13
SHKBP1-206ENST00000595523 ERFEQ4G0M1 354 aa14.21□□□□□ -0.13
SHKBP1-206ENST00000595523 TTLL6Q8N841 843 aa14.21□□□□□ -0.13
SHKBP1-206ENST00000595523 ZNF784Q8NCA9 323 aaPredicted RBP14.21□□□□□ -0.13
SHKBP1-206ENST00000595523 PLBD2Q8NHP8 589 aa14.21□□□□□ -0.13
SHKBP1-206ENST00000595523 TIAM2Q8IVF5 1701 aa14.21□□□□□ -0.14
SHKBP1-206ENST00000595523 TWISTNBQ3B726 338 aaPredicted RBP14.2□□□□□ -0.14
SHKBP1-206ENST00000595523 DIEXFQ68CQ4 756 aaKnown RBP14.2□□□□□ -0.14
SHKBP1-206ENST00000595523 NYXQ9GZU5 481 aa14.2□□□□□ -0.14
SHKBP1-206ENST00000595523 PDZRN3Q9UPQ7 1066 aa14.2□□□□□ -0.14
SHKBP1-206ENST00000595523 TCIRG1Q13488 830 aa14.19□□□□□ -0.14
SHKBP1-206ENST00000595523 PARP10Q53GL7 1025 aa14.19□□□□□ -0.14
SHKBP1-206ENST00000595523 CCDC30Q5VVM6 783 aa14.19□□□□□ -0.14
SHKBP1-206ENST00000595523 STYK1Q6J9G0 422 aa14.19□□□□□ -0.14
SHKBP1-206ENST00000595523 ANKRD13DQ6ZTN6 518 aa14.19□□□□□ -0.14
SHKBP1-206ENST00000595523 ARHGAP27Q6ZUM4 889 aa14.19□□□□□ -0.14
SHKBP1-206ENST00000595523 NLRP10Q86W26 655 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms