RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 SERPINB2P05120 415 aa19.93■□□□□ 0.78
USE1-206ENST00000595101 HOXB7P09629 217 aa19.93■□□□□ 0.78
USE1-206ENST00000595101 AIMP1Q12904 312 aaKnown RBP19.93■□□□□ 0.78
USE1-206ENST00000595101 ERBB4Q15303 1308 aa19.93■□□□□ 0.78
USE1-206ENST00000595101 COPS6Q7L5N1 327 aa19.93■□□□□ 0.78
USE1-206ENST00000595101 TCERG1O14776 1098 aaKnown RBP19.92■□□□□ 0.78
USE1-206ENST00000595101 XAGE3Q8WTP9 111 aa19.92■□□□□ 0.78
USE1-206ENST00000595101 DDX21Q9NR30 783 aaKnown RBP eCLIP19.92■□□□□ 0.78
USE1-206ENST00000595101 SCN7AQ01118 1682 aa19.91■□□□□ 0.78
USE1-206ENST00000595101 MAP3K15Q6ZN16 1313 aa19.91■□□□□ 0.78
USE1-206ENST00000595101 A0A0G2JLW4 131 aa19.9■□□□□ 0.78
USE1-206ENST00000595101 CLEC4GQ6UXB4 293 aa19.9■□□□□ 0.78
USE1-206ENST00000595101 C10orf71Q711Q0 1435 aa19.9■□□□□ 0.78
USE1-206ENST00000595101 SETDB2Q96T68 719 aa19.9■□□□□ 0.78
USE1-206ENST00000595101 CARMIL3Q8ND23 1372 aa19.9■□□□□ 0.78
USE1-206ENST00000595101 FAM177BA6PVY3 158 aa19.89■□□□□ 0.77
USE1-206ENST00000595101 EXOSC9Q06265 439 aaKnown RBP19.89■□□□□ 0.77
USE1-206ENST00000595101 KIF6Q6ZMV9 814 aa19.89■□□□□ 0.77
USE1-206ENST00000595101 PHAXQ9H814 394 aaKnown RBP19.89■□□□□ 0.77
USE1-206ENST00000595101 DBF4Q9UBU7 674 aaPredicted RBP19.89■□□□□ 0.77
USE1-206ENST00000595101 NIP7Q9Y221 180 aaKnown RBP eCLIP19.89■□□□□ 0.77
USE1-206ENST00000595101 ERVV-1B6SEH8 477 aa19.88■□□□□ 0.77
USE1-206ENST00000595101 TWISTNBQ3B726 338 aaPredicted RBP19.88■□□□□ 0.77
USE1-206ENST00000595101 CDCA7LQ96GN5 454 aa19.88■□□□□ 0.77
USE1-206ENST00000595101 DPEP1P16444 411 aa19.88■□□□□ 0.77
USE1-206ENST00000595101 YBX3P16989 372 aaKnown RBP eCLIP19.88■□□□□ 0.77
USE1-206ENST00000595101 ZNF652Q9Y2D9 606 aa19.88■□□□□ 0.77
USE1-206ENST00000595101 BCORQ6W2J9 1755 aa19.87■□□□□ 0.77
USE1-206ENST00000595101 PXDNLA1KZ92 1463 aa19.87■□□□□ 0.77
USE1-206ENST00000595101 GPTP24298 496 aa19.87■□□□□ 0.77
USE1-206ENST00000595101 CHRNA5P30532 468 aa19.87■□□□□ 0.77
USE1-206ENST00000595101 PRR5LQ6MZQ0 368 aa19.87■□□□□ 0.77
USE1-206ENST00000595101 ZNF428Q96B54 188 aa19.87■□□□□ 0.77
USE1-206ENST00000595101 KCNA3P22001 575 aa19.86■□□□□ 0.77
USE1-206ENST00000595101 GOLGA2Q08379 1002 aa19.86■□□□□ 0.77
USE1-206ENST00000595101 UBN2Q6ZU65 1347 aa19.86■□□□□ 0.77
USE1-206ENST00000595101 GPR162Q16538 588 aa19.85■□□□□ 0.77
USE1-206ENST00000595101 GIGYF2Q6Y7W6 1299 aaKnown RBP19.85■□□□□ 0.77
USE1-206ENST00000595101 VAMP4O75379 141 aa19.85■□□□□ 0.77
USE1-206ENST00000595101 TGFB2P61812 414 aa19.85■□□□□ 0.77
USE1-206ENST00000595101 CCDC30Q5VVM6 783 aa19.84■□□□□ 0.77
USE1-206ENST00000595101 MYH16Q9H6N6 1097 aa19.84■□□□□ 0.77
USE1-206ENST00000595101 HYPKQ9NX55 129 aa19.84■□□□□ 0.77
USE1-206ENST00000595101 AFDNP55196 1824 aaKnown RBP19.84■□□□□ 0.77
USE1-206ENST00000595101 NBPF5PQ86XG9 351 aaPredicted RBP19.83■□□□□ 0.77
USE1-206ENST00000595101 ZNF34Q8IZ26 560 aa19.83■□□□□ 0.77
USE1-206ENST00000595101 SUSD4Q5VX71 490 aa19.83■□□□□ 0.76
USE1-206ENST00000595101 CNBD1Q8NA66 436 aa19.83■□□□□ 0.76
USE1-206ENST00000595101 NRXN2Q9P2S2 1712 aa19.82■□□□□ 0.76
USE1-206ENST00000595101 RGL2O15211 777 aa19.82■□□□□ 0.76
USE1-206ENST00000595101 SLFN5Q08AF3 891 aa19.82■□□□□ 0.76
USE1-206ENST00000595101 ANKRD13DQ6ZTN6 518 aa19.82■□□□□ 0.76
USE1-206ENST00000595101 G2E3Q7L622 706 aa19.82■□□□□ 0.76
USE1-206ENST00000595101 NUTM1Q86Y26 1132 aa19.82■□□□□ 0.76
USE1-206ENST00000595101 KIAA1551Q9HCM1 1747 aa19.81■□□□□ 0.76
USE1-206ENST00000595101 KIF13BQ9NQT8 1826 aa19.81■□□□□ 0.76
USE1-206ENST00000595101 NPHP1O15259 732 aa19.81■□□□□ 0.76
USE1-206ENST00000595101 N4BP2Q86UW6 1770 aaPredicted RBP19.81■□□□□ 0.76
USE1-206ENST00000595101 ATP10DQ9P241 1426 aa19.81■□□□□ 0.76
USE1-206ENST00000595101 SLC4A2P04920 1241 aa19.8■□□□□ 0.76
USE1-206ENST00000595101 PLBD2Q8NHP8 589 aa19.8■□□□□ 0.76
USE1-206ENST00000595101 E9PSI1 815 aa19.79■□□□□ 0.76
USE1-206ENST00000595101 TPTE2Q6XPS3 522 aa19.79■□□□□ 0.76
USE1-206ENST00000595101 BRIP1Q9BX63 1249 aa19.79■□□□□ 0.76
USE1-206ENST00000595101 ATP5J2-PTCD1G3V325 749 aa19.78■□□□□ 0.76
USE1-206ENST00000595101 NUP98P52948 1817 aa19.78■□□□□ 0.76
USE1-206ENST00000595101 TCIRG1Q13488 830 aa19.78■□□□□ 0.76
USE1-206ENST00000595101 ERFEQ4G0M1 354 aa19.78■□□□□ 0.76
USE1-206ENST00000595101 C2CD5Q86YS7 1000 aa19.78■□□□□ 0.76
USE1-206ENST00000595101 SYNE4Q8N205 404 aa19.78■□□□□ 0.76
USE1-206ENST00000595101 BCS1LQ9Y276 419 aa19.78■□□□□ 0.76
USE1-206ENST00000595101 DCAF8L1A6NGE4 600 aa19.78■□□□□ 0.76
USE1-206ENST00000595101 HNRNPUQ00839 825 aaKnown RBP eCLIP19.78■□□□□ 0.76
USE1-206ENST00000595101 STK31Q9BXU1 1019 aa19.78■□□□□ 0.76
USE1-206ENST00000595101 ABCC12Q96J65 1359 aa19.77■□□□□ 0.76
USE1-206ENST00000595101 NTSR2O95665 410 aa19.77■□□□□ 0.76
USE1-206ENST00000595101 ST5P78524 1137 aa19.77■□□□□ 0.76
USE1-206ENST00000595101 RIC3Q7Z5B4 369 aa19.77■□□□□ 0.76
USE1-206ENST00000595101 NLRP10Q86W26 655 aa19.77■□□□□ 0.76
USE1-206ENST00000595101 TRMT2AQ8IZ69 625 aaKnown RBP19.77■□□□□ 0.76
USE1-206ENST00000595101 PIM2Q9P1W9 311 aa19.76■□□□□ 0.75
USE1-206ENST00000595101 GTF2E1P29083 439 aaPredicted RBP19.75■□□□□ 0.75
USE1-206ENST00000595101 PI4KAP2A4QPH2 592 aa19.75■□□□□ 0.75
USE1-206ENST00000595101 PI4KAP1Q8N8J0 262 aa19.75■□□□□ 0.75
USE1-206ENST00000595101 ANKRD31Q8N7Z5 1873 aa19.74■□□□□ 0.75
USE1-206ENST00000595101 H0YIN7 160 aa19.74■□□□□ 0.75
USE1-206ENST00000595101 PDE6BP35913 854 aa19.74■□□□□ 0.75
USE1-206ENST00000595101 PARP10Q53GL7 1025 aa19.74■□□□□ 0.75
USE1-206ENST00000595101 C3orf67Q6ZVT6 689 aa19.74■□□□□ 0.75
USE1-206ENST00000595101 ISCA1Q9BUE6 129 aa19.74■□□□□ 0.75
USE1-206ENST00000595101 MAP3K2Q9Y2U5 619 aa19.74■□□□□ 0.75
USE1-206ENST00000595101 FLIIQ13045 1269 aa19.73■□□□□ 0.75
USE1-206ENST00000595101 HSP90AB3PQ58FF7 597 aa19.73■□□□□ 0.75
USE1-206ENST00000595101 ZNF622Q969S3 477 aaKnown RBP eCLIP19.73■□□□□ 0.75
USE1-206ENST00000595101 MYD88Q99836 296 aa19.73■□□□□ 0.75
USE1-206ENST00000595101 UTP14AQ9BVJ6 771 aaKnown RBP19.73■□□□□ 0.75
USE1-206ENST00000595101 CHMP4AQ9BY43 222 aa19.73■□□□□ 0.75
USE1-206ENST00000595101 ADCY9O60503 1353 aa19.73■□□□□ 0.75
USE1-206ENST00000595101 SRGNP10124 158 aa19.72■□□□□ 0.75
USE1-206ENST00000595101 DALRD3Q5D0E6 543 aaKnown RBP19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms