RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 ANXA1P04083 346 aa19.26■□□□□ 0.67
USE1-205ENST00000594724 ARHGAP27Q6ZUM4 889 aa19.26■□□□□ 0.67
USE1-205ENST00000594724 C2CD5Q86YS7 1000 aa19.26■□□□□ 0.67
USE1-205ENST00000594724 CFAP44Q96MT7 982 aa19.26■□□□□ 0.67
USE1-205ENST00000594724 NIP7Q9Y221 180 aaKnown RBP eCLIP19.26■□□□□ 0.67
USE1-205ENST00000594724 FAM177BA6PVY3 158 aa19.25■□□□□ 0.67
USE1-205ENST00000594724 PDIA6Q15084 440 aa19.25■□□□□ 0.67
USE1-205ENST00000594724 PROSER3Q2NL68 480 aa19.25■□□□□ 0.67
USE1-205ENST00000594724 CNBD1Q8NA66 436 aa19.25■□□□□ 0.67
USE1-205ENST00000594724 ERBB4Q15303 1308 aa19.25■□□□□ 0.67
USE1-205ENST00000594724 H0YIN7 160 aa19.24■□□□□ 0.67
USE1-205ENST00000594724 KIF6Q6ZMV9 814 aa19.24■□□□□ 0.67
USE1-205ENST00000594724 NBPF5PQ86XG9 351 aaPredicted RBP19.24■□□□□ 0.67
USE1-205ENST00000594724 BRIP1Q9BX63 1249 aa19.24■□□□□ 0.67
USE1-205ENST00000594724 ZBTB3Q9H5J0 574 aa19.24■□□□□ 0.67
USE1-205ENST00000594724 MBIPQ9NS73 344 aa19.24■□□□□ 0.67
USE1-205ENST00000594724 BRCA1P38398 1863 aaKnown RBP19.24■□□□□ 0.67
USE1-205ENST00000594724 MAP3K15Q6ZN16 1313 aa19.24■□□□□ 0.67
USE1-205ENST00000594724 ERVV-1B6SEH8 477 aa19.23■□□□□ 0.67
USE1-205ENST00000594724 ZNF853P0CG23 659 aa19.23■□□□□ 0.67
USE1-205ENST00000594724 LRP10Q7Z4F1 713 aa19.23■□□□□ 0.67
USE1-205ENST00000594724 RGL2O15211 777 aa19.22■□□□□ 0.67
USE1-205ENST00000594724 PDE6BP35913 854 aa19.22■□□□□ 0.67
USE1-205ENST00000594724 ST5P78524 1137 aa19.22■□□□□ 0.67
USE1-205ENST00000594724 GNAI1P63096 354 aa19.21■□□□□ 0.67
USE1-205ENST00000594724 TTLL6Q8N841 843 aa19.21■□□□□ 0.67
USE1-205ENST00000594724 ZNF622Q969S3 477 aaKnown RBP eCLIP19.21■□□□□ 0.67
USE1-205ENST00000594724 IFT57Q9NWB7 429 aa19.21■□□□□ 0.67
USE1-205ENST00000594724 CALD1Q05682 793 aaKnown RBP19.2■□□□□ 0.66
USE1-205ENST00000594724 AIMP1Q12904 312 aaKnown RBP19.2■□□□□ 0.66
USE1-205ENST00000594724 DUSP27Q5VZP5 1158 aa19.2■□□□□ 0.66
USE1-205ENST00000594724 TPTE2Q6XPS3 522 aa19.2■□□□□ 0.66
USE1-205ENST00000594724 ANKRD31Q8N7Z5 1873 aa19.2■□□□□ 0.66
USE1-205ENST00000594724 GPTP24298 496 aa19.19■□□□□ 0.66
USE1-205ENST00000594724 HDGFL1Q5TGJ6 251 aa19.19■□□□□ 0.66
USE1-205ENST00000594724 COPS6Q7L5N1 327 aa19.19■□□□□ 0.66
USE1-205ENST00000594724 ELL2O00472 640 aaPredicted RBP19.18■□□□□ 0.66
USE1-205ENST00000594724 GIGYF2Q6Y7W6 1299 aaKnown RBP19.18■□□□□ 0.66
USE1-205ENST00000594724 XAGE3Q8WTP9 111 aa19.18■□□□□ 0.66
USE1-205ENST00000594724 DDX21Q9NR30 783 aaKnown RBP eCLIP19.18■□□□□ 0.66
USE1-205ENST00000594724 CHPF2Q9P2E5 772 aa19.18■□□□□ 0.66
USE1-205ENST00000594724 PDZRN3Q9UPQ7 1066 aa19.18■□□□□ 0.66
USE1-205ENST00000594724 ATP10DQ9P241 1426 aa19.17■□□□□ 0.66
USE1-205ENST00000594724 ARFGEF1Q9Y6D6 1849 aa19.17■□□□□ 0.66
USE1-205ENST00000594724 HOXB7P09629 217 aa19.17■□□□□ 0.66
USE1-205ENST00000594724 GTF2E1P29083 439 aaPredicted RBP19.17■□□□□ 0.66
USE1-205ENST00000594724 WWC1Q8IX03 1113 aa19.17■□□□□ 0.66
USE1-205ENST00000594724 ZNF34Q8IZ26 560 aa19.17■□□□□ 0.66
USE1-205ENST00000594724 FAM9BQ8IZU0 186 aa19.17■□□□□ 0.66
USE1-205ENST00000594724 ZNF526Q8TF50 670 aaPredicted RBP19.17■□□□□ 0.66
USE1-205ENST00000594724 SALL2Q9Y467 1007 aaPredicted RBP19.17■□□□□ 0.66
USE1-205ENST00000594724 NUP98P52948 1817 aa19.16■□□□□ 0.66
USE1-205ENST00000594724 SRGNP10124 158 aa19.16■□□□□ 0.66
USE1-205ENST00000594724 NUTM1Q86Y26 1132 aa19.16■□□□□ 0.66
USE1-205ENST00000594724 ZNF219Q9P2Y4 722 aaPredicted RBP19.16■□□□□ 0.66
USE1-205ENST00000594724 UBN2Q6ZU65 1347 aa19.16■□□□□ 0.66
USE1-205ENST00000594724 ADCY9O60503 1353 aa19.16■□□□□ 0.66
USE1-205ENST00000594724 DLEC1Q9Y238 1755 aa19.15■□□□□ 0.66
USE1-205ENST00000594724 CCDC27Q2M243 656 aa19.15■□□□□ 0.66
USE1-205ENST00000594724 SUSD4Q5VX71 490 aa19.15■□□□□ 0.66
USE1-205ENST00000594724 C9orf131Q5VYM1 1079 aa19.15■□□□□ 0.66
USE1-205ENST00000594724 C8orf58Q8NAV2 365 aa19.15■□□□□ 0.66
USE1-205ENST00000594724 ERFEQ4G0M1 354 aa19.14■□□□□ 0.65
USE1-205ENST00000594724 TSR2Q969E8 191 aaKnown RBP19.14■□□□□ 0.65
USE1-205ENST00000594724 MASTLQ96GX5 879 aa19.14■□□□□ 0.65
USE1-205ENST00000594724 NYXQ9GZU5 481 aa19.14■□□□□ 0.65
USE1-205ENST00000594724 DBF4Q9UBU7 674 aaPredicted RBP19.14■□□□□ 0.65
USE1-205ENST00000594724 COL11A2P13942 1736 aaPredicted RBP19.14■□□□□ 0.65
USE1-205ENST00000594724 KLRG2A4D1S0 409 aaPredicted RBP19.13■□□□□ 0.65
USE1-205ENST00000594724 C21orf2O43822 256 aa19.13■□□□□ 0.65
USE1-205ENST00000594724 RASSF7Q02833 373 aa19.13■□□□□ 0.65
USE1-205ENST00000594724 STYK1Q6J9G0 422 aa19.13■□□□□ 0.65
USE1-205ENST00000594724 CNKSR1Q969H4 720 aa19.13■□□□□ 0.65
USE1-205ENST00000594724 TSPYL6Q8N831 410 aa19.12■□□□□ 0.65
USE1-205ENST00000594724 GPBP1L1Q9HC44 474 aaPredicted RBP19.12■□□□□ 0.65
USE1-205ENST00000594724 ABCC12Q96J65 1359 aa19.11■□□□□ 0.65
USE1-205ENST00000594724 NTSR2O95665 410 aa19.11■□□□□ 0.65
USE1-205ENST00000594724 PRPF40BQ6NWY9 871 aaKnown RBP19.11■□□□□ 0.65
USE1-205ENST00000594724 RNF181Q9P0P0 153 aa19.11■□□□□ 0.65
USE1-205ENST00000594724 NPR1P16066 1061 aa19.1■□□□□ 0.65
USE1-205ENST00000594724 PRELPP51888 382 aa19.1■□□□□ 0.65
USE1-205ENST00000594724 TCIRG1Q13488 830 aa19.1■□□□□ 0.65
USE1-205ENST00000594724 NCBP3Q53F19 620 aaKnown RBP19.1■□□□□ 0.65
USE1-205ENST00000594724 PARP10Q53GL7 1025 aa19.1■□□□□ 0.65
USE1-205ENST00000594724 ANKRD13DQ6ZTN6 518 aa19.1■□□□□ 0.65
USE1-205ENST00000594724 PPP1R42Q7Z4L9 355 aa19.1■□□□□ 0.65
USE1-205ENST00000594724 ZNF428Q96B54 188 aa19.1■□□□□ 0.65
USE1-205ENST00000594724 HYPKQ9NX55 129 aa19.1■□□□□ 0.65
USE1-205ENST00000594724 NFKBIEO00221 500 aa19.09■□□□□ 0.65
USE1-205ENST00000594724 PLBD2Q8NHP8 589 aa19.09■□□□□ 0.65
USE1-205ENST00000594724 UTP14AQ9BVJ6 771 aaKnown RBP19.09■□□□□ 0.65
USE1-205ENST00000594724 PHAXQ9H814 394 aaKnown RBP19.09■□□□□ 0.65
USE1-205ENST00000594724 HSP90AB3PQ58FF7 597 aa19.08■□□□□ 0.64
USE1-205ENST00000594724 IBTKQ9P2D0 1353 aaPredicted RBP19.07■□□□□ 0.64
USE1-205ENST00000594724 SLX4Q8IY92 1834 aa19.07■□□□□ 0.64
USE1-205ENST00000594724 IL16Q14005 1332 aa19.07■□□□□ 0.64
USE1-205ENST00000594724 NLRP10Q86W26 655 aa19.07■□□□□ 0.64
USE1-205ENST00000594724 TNRC6CQ9HCJ0 1690 aaKnown RBP19.06■□□□□ 0.64
USE1-205ENST00000594724 LMNB1P20700 586 aa19.06■□□□□ 0.64
USE1-205ENST00000594724 CCDC30Q5VVM6 783 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms