RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 DDX21Q9NR30 783 aaKnown RBP eCLIP28.42■■■□□ 2.14
HOMER3-206ENST00000594439 ZNF652Q9Y2D9 606 aa28.42■■■□□ 2.14
HOMER3-206ENST00000594439 PXDNLA1KZ92 1463 aa28.41■■■□□ 2.14
HOMER3-206ENST00000594439 HLFQ16534 295 aa28.41■■■□□ 2.14
HOMER3-206ENST00000594439 N4BP2Q86UW6 1770 aaPredicted RBP28.41■■■□□ 2.14
HOMER3-206ENST00000594439 MAP3K15Q6ZN16 1313 aa28.41■■■□□ 2.14
HOMER3-206ENST00000594439 DCAF8L1A6NGE4 600 aa28.4■■■□□ 2.14
HOMER3-206ENST00000594439 ERVV-1B6SEH8 477 aa28.4■■■□□ 2.14
HOMER3-206ENST00000594439 ELL2O00472 640 aaPredicted RBP28.4■■■□□ 2.14
HOMER3-206ENST00000594439 KIF6Q6ZMV9 814 aa28.4■■■□□ 2.14
HOMER3-206ENST00000594439 CHPF2Q9P2E5 772 aa28.4■■■□□ 2.14
HOMER3-206ENST00000594439 CARMIL3Q8ND23 1372 aa28.39■■■□□ 2.14
HOMER3-206ENST00000594439 TGFB2P61812 414 aa28.39■■■□□ 2.14
HOMER3-206ENST00000594439 SETDB2Q96T68 719 aa28.39■■■□□ 2.14
HOMER3-206ENST00000594439 ZNF521Q96K83 1311 aa28.39■■■□□ 2.13
HOMER3-206ENST00000594439 TSPYL6Q8N831 410 aa28.38■■■□□ 2.13
HOMER3-206ENST00000594439 ZBTB3Q9H5J0 574 aa28.37■■■□□ 2.13
HOMER3-206ENST00000594439 SPINK5Q9NQ38 1064 aaPredicted RBP28.37■■■□□ 2.13
HOMER3-206ENST00000594439 FANCIQ9NVI1 1328 aa28.37■■■□□ 2.13
HOMER3-206ENST00000594439 XAGE3Q8WTP9 111 aa28.36■■■□□ 2.13
HOMER3-206ENST00000594439 DBF4Q9UBU7 674 aaPredicted RBP28.36■■■□□ 2.13
HOMER3-206ENST00000594439 GPR162Q16538 588 aa28.35■■■□□ 2.13
HOMER3-206ENST00000594439 COPS6Q7L5N1 327 aa28.35■■■□□ 2.13
HOMER3-206ENST00000594439 BRCA1P38398 1863 aaKnown RBP28.34■■■□□ 2.13
HOMER3-206ENST00000594439 ANKRD31Q8N7Z5 1873 aa28.34■■■□□ 2.13
HOMER3-206ENST00000594439 A0A0G2JLW4 131 aa28.34■■■□□ 2.13
HOMER3-206ENST00000594439 DPEP1P16444 411 aa28.34■■■□□ 2.13
HOMER3-206ENST00000594439 PRR5LQ6MZQ0 368 aa28.34■■■□□ 2.13
HOMER3-206ENST00000594439 PELP1Q8IZL8 1130 aaKnown RBP28.34■■■□□ 2.13
HOMER3-206ENST00000594439 NIP7Q9Y221 180 aaKnown RBP eCLIP28.34■■■□□ 2.13
HOMER3-206ENST00000594439 ATP10DQ9P241 1426 aa28.34■■■□□ 2.13
HOMER3-206ENST00000594439 YBX3P16989 372 aaKnown RBP eCLIP28.33■■■□□ 2.13
HOMER3-206ENST00000594439 GIGYF2Q6Y7W6 1299 aaKnown RBP28.33■■■□□ 2.13
HOMER3-206ENST00000594439 AIMP1Q12904 312 aaKnown RBP28.32■■■□□ 2.12
HOMER3-206ENST00000594439 KCNA3P22001 575 aa28.31■■■□□ 2.12
HOMER3-206ENST00000594439 HYPKQ9NX55 129 aa28.31■■■□□ 2.12
HOMER3-206ENST00000594439 TWISTNBQ3B726 338 aaPredicted RBP28.3■■■□□ 2.12
HOMER3-206ENST00000594439 CNBD1Q8NA66 436 aa28.3■■■□□ 2.12
HOMER3-206ENST00000594439 WWC3Q9ULE0 1092 aa28.3■■■□□ 2.12
HOMER3-206ENST00000594439 ANKRD36CQ5JPF3 1778 aa28.29■■■□□ 2.12
HOMER3-206ENST00000594439 CHRNA5P30532 468 aa28.29■■■□□ 2.12
HOMER3-206ENST00000594439 GOLGA2Q08379 1002 aa28.29■■■□□ 2.12
HOMER3-206ENST00000594439 CCDC30Q5VVM6 783 aa28.29■■■□□ 2.12
HOMER3-206ENST00000594439 NBPF5PQ86XG9 351 aaPredicted RBP28.29■■■□□ 2.12
HOMER3-206ENST00000594439 ZNF34Q8IZ26 560 aa28.29■■■□□ 2.12
HOMER3-206ENST00000594439 CCDC24Q8N4L8 307 aa28.29■■■□□ 2.12
HOMER3-206ENST00000594439 CHMP4AQ9BY43 222 aa28.29■■■□□ 2.12
HOMER3-206ENST00000594439 MYH16Q9H6N6 1097 aa28.29■■■□□ 2.12
HOMER3-206ENST00000594439 DLEC1Q9Y238 1755 aa28.28■■■□□ 2.12
HOMER3-206ENST00000594439 GPTP24298 496 aa28.27■■■□□ 2.12
HOMER3-206ENST00000594439 EXOSC9Q06265 439 aaKnown RBP28.27■■■□□ 2.12
HOMER3-206ENST00000594439 BRIP1Q9BX63 1249 aa28.27■■■□□ 2.12
HOMER3-206ENST00000594439 UBN2Q6ZU65 1347 aa28.26■■■□□ 2.11
HOMER3-206ENST00000594439 FAM177BA6PVY3 158 aa28.25■■■□□ 2.11
HOMER3-206ENST00000594439 ST5P78524 1137 aa28.25■■■□□ 2.11
HOMER3-206ENST00000594439 TPTE2Q6XPS3 522 aa28.25■■■□□ 2.11
HOMER3-206ENST00000594439 PLBD2Q8NHP8 589 aa28.25■■■□□ 2.11
HOMER3-206ENST00000594439 PHAXQ9H814 394 aaKnown RBP28.25■■■□□ 2.11
HOMER3-206ENST00000594439 COL11A2P13942 1736 aaPredicted RBP28.24■■■□□ 2.11
HOMER3-206ENST00000594439 NPHP1O15259 732 aa28.24■■■□□ 2.11
HOMER3-206ENST00000594439 GRIN3BO60391 1043 aa28.24■■■□□ 2.11
HOMER3-206ENST00000594439 VAMP4O75379 141 aa28.24■■■□□ 2.11
HOMER3-206ENST00000594439 ANKRD13DQ6ZTN6 518 aa28.24■■■□□ 2.11
HOMER3-206ENST00000594439 HSP90AB3PQ58FF7 597 aa28.23■■■□□ 2.11
HOMER3-206ENST00000594439 C2CD5Q86YS7 1000 aa28.23■■■□□ 2.11
HOMER3-206ENST00000594439 PIM2Q9P1W9 311 aa28.23■■■□□ 2.11
HOMER3-206ENST00000594439 ARFGEF2Q9Y6D5 1785 aa28.23■■■□□ 2.11
HOMER3-206ENST00000594439 IBTKQ9P2D0 1353 aaPredicted RBP28.23■■■□□ 2.11
HOMER3-206ENST00000594439 CHD4Q14839 1912 aa28.22■■■□□ 2.11
HOMER3-206ENST00000594439 TCERG1O14776 1098 aaKnown RBP28.22■■■□□ 2.11
HOMER3-206ENST00000594439 PDE6BP35913 854 aa28.22■■■□□ 2.11
HOMER3-206ENST00000594439 TCIRG1Q13488 830 aa28.22■■■□□ 2.11
HOMER3-206ENST00000594439 SUSD4Q5VX71 490 aa28.22■■■□□ 2.11
HOMER3-206ENST00000594439 ARFGEF1Q9Y6D6 1849 aa28.22■■■□□ 2.11
HOMER3-206ENST00000594439 PARP10Q53GL7 1025 aa28.21■■■□□ 2.11
HOMER3-206ENST00000594439 NYXQ9GZU5 481 aa28.21■■■□□ 2.11
HOMER3-206ENST00000594439 BCS1LQ9Y276 419 aa28.21■■■□□ 2.11
HOMER3-206ENST00000594439 E9PSI1 815 aa28.2■■■□□ 2.1
HOMER3-206ENST00000594439 H0YIN7 160 aa28.2■■■□□ 2.1
HOMER3-206ENST00000594439 STK31Q9BXU1 1019 aa28.2■■■□□ 2.1
HOMER3-206ENST00000594439 PDZRN3Q9UPQ7 1066 aa28.2■■■□□ 2.1
HOMER3-206ENST00000594439 CACNA1FO60840 1977 aa28.2■■■□□ 2.1
HOMER3-206ENST00000594439 NTSR2O95665 410 aa28.19■■■□□ 2.1
HOMER3-206ENST00000594439 SLFN5Q08AF3 891 aa28.19■■■□□ 2.1
HOMER3-206ENST00000594439 DALRD3Q5D0E6 543 aaKnown RBP28.18■■■□□ 2.1
HOMER3-206ENST00000594439 NLRP10Q86W26 655 aa28.18■■■□□ 2.1
HOMER3-206ENST00000594439 NUTM1Q86Y26 1132 aa28.18■■■□□ 2.1
HOMER3-206ENST00000594439 ABCC12Q96J65 1359 aa28.18■■■□□ 2.1
HOMER3-206ENST00000594439 TNRC6CQ9HCJ0 1690 aaKnown RBP28.18■■■□□ 2.1
HOMER3-206ENST00000594439 GTF2E1P29083 439 aaPredicted RBP28.17■■■□□ 2.1
HOMER3-206ENST00000594439 ERFEQ4G0M1 354 aa28.17■■■□□ 2.1
HOMER3-206ENST00000594439 PPP1R42Q7Z4L9 355 aa28.17■■■□□ 2.1
HOMER3-206ENST00000594439 KLRG2A4D1S0 409 aaPredicted RBP28.16■■■□□ 2.1
HOMER3-206ENST00000594439 SLC4A2P04920 1241 aa28.16■■■□□ 2.1
HOMER3-206ENST00000594439 CDCA7LQ96GN5 454 aa28.16■■■□□ 2.1
HOMER3-206ENST00000594439 ISCA1Q9BUE6 129 aa28.16■■■□□ 2.1
HOMER3-206ENST00000594439 SRGNP10124 158 aa28.15■■■□□ 2.1
HOMER3-206ENST00000594439 G2E3Q7L622 706 aa28.15■■■□□ 2.1
HOMER3-206ENST00000594439 RIC3Q7Z5B4 369 aa28.15■■■□□ 2.1
HOMER3-206ENST00000594439 RIC1Q4ADV7 1423 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms