RNA–Protein interactions for RNA: ENST00000593891.1

ZNF558-202, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 292 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-202ENST00000593891 SOS1Q07889 1333 aaPredicted RBP16.7■□□□□ 0.26
ZNF558-202ENST00000593891 FLT4P35916 1363 aa16.69■□□□□ 0.26
ZNF558-202ENST00000593891 HSP90AB1P08238 724 aaKnown RBP16.69■□□□□ 0.26
ZNF558-202ENST00000593891 EIF6P56537 245 aaKnown RBP16.69■□□□□ 0.26
ZNF558-202ENST00000593891 MASTLQ96GX5 879 aa16.69■□□□□ 0.26
ZNF558-202ENST00000593891 BCL2L12Q9HB09 334 aa16.69■□□□□ 0.26
ZNF558-202ENST00000593891 RTKN2Q8IZC4 609 aa16.68■□□□□ 0.26
ZNF558-202ENST00000593891 AFDNP55196 1824 aaKnown RBP16.68■□□□□ 0.26
ZNF558-202ENST00000593891 IARSP41252 1262 aaKnown RBP16.67■□□□□ 0.26
ZNF558-202ENST00000593891 HUNKP57058 714 aa16.67■□□□□ 0.26
ZNF558-202ENST00000593891 KIF23Q02241 960 aaPredicted RBP16.67■□□□□ 0.26
ZNF558-202ENST00000593891 SYNE4Q8N205 404 aa16.67■□□□□ 0.26
ZNF558-202ENST00000593891 A0A0C4DFX4 3053 aa16.67■□□□□ 0.26
ZNF558-202ENST00000593891 TONSLQ96HA7 1378 aa16.66■□□□□ 0.26
ZNF558-202ENST00000593891 NPHP1O15259 732 aa16.66■□□□□ 0.26
ZNF558-202ENST00000593891 SRGNP10124 158 aa16.66■□□□□ 0.26
ZNF558-202ENST00000593891 CCDC24Q8N4L8 307 aa16.66■□□□□ 0.26
ZNF558-202ENST00000593891 C7orf43Q8WVR3 580 aa16.66■□□□□ 0.26
ZNF558-202ENST00000593891 CCDC102AQ96A19 550 aa16.66■□□□□ 0.26
ZNF558-202ENST00000593891 KIF24Q5T7B8 1368 aa16.65■□□□□ 0.26
ZNF558-202ENST00000593891 SCNN1DP51172 638 aa16.65■□□□□ 0.26
ZNF558-202ENST00000593891 PRR5LQ6MZQ0 368 aa16.65■□□□□ 0.26
ZNF558-202ENST00000593891 COL15A1P39059 1388 aa16.64■□□□□ 0.26
ZNF558-202ENST00000593891 RGMBQ6NW40 437 aa16.64■□□□□ 0.25
ZNF558-202ENST00000593891 FBXO46Q6PJ61 603 aaPredicted RBP16.64■□□□□ 0.25
ZNF558-202ENST00000593891 GLIS2Q9BZE0 524 aaPredicted RBP16.64■□□□□ 0.25
ZNF558-202ENST00000593891 TRPM7Q96QT4 1865 aa16.64■□□□□ 0.25
ZNF558-202ENST00000593891 NCAPD2Q15021 1401 aa16.62■□□□□ 0.25
ZNF558-202ENST00000593891 FAM155AB1AL88 458 aaPredicted RBP16.62■□□□□ 0.25
ZNF558-202ENST00000593891 DNAJC10Q8IXB1 793 aa16.62■□□□□ 0.25
ZNF558-202ENST00000593891 ADARB2Q9NS39 739 aaKnown RBP16.62■□□□□ 0.25
ZNF558-202ENST00000593891 ST5P78524 1137 aa16.61■□□□□ 0.25
ZNF558-202ENST00000593891 GGNBP2Q9H3C7 697 aa16.61■□□□□ 0.25
ZNF558-202ENST00000593891 ROCK2O75116 1388 aaKnown RBP16.61■□□□□ 0.25
ZNF558-202ENST00000593891 RAB3GAP2Q9H2M9 1393 aa16.61■□□□□ 0.25
ZNF558-202ENST00000593891 TBC1D9BQ66K14 1250 aa16.6■□□□□ 0.25
ZNF558-202ENST00000593891 CDC37L1Q7L3B6 337 aa16.6■□□□□ 0.25
ZNF558-202ENST00000593891 REM2Q8IYK8 340 aaPredicted RBP16.6■□□□□ 0.25
ZNF558-202ENST00000593891 CNBD1Q8NA66 436 aa16.6■□□□□ 0.25
ZNF558-202ENST00000593891 EYA1Q99502 592 aa16.6■□□□□ 0.25
ZNF558-202ENST00000593891 CYP19A1P11511 503 aaPredicted RBP16.59■□□□□ 0.25
ZNF558-202ENST00000593891 ZNF157P51786 506 aaPredicted RBP16.59■□□□□ 0.25
ZNF558-202ENST00000593891 NFATC2IPQ8NCF5 419 aa16.59■□□□□ 0.25
ZNF558-202ENST00000593891 PUS7Q96PZ0 661 aaKnown RBP16.59■□□□□ 0.25
ZNF558-202ENST00000593891 CSRNP1Q96S65 589 aa16.59■□□□□ 0.25
ZNF558-202ENST00000593891 SLX4Q8IY92 1834 aa16.59■□□□□ 0.25
ZNF558-202ENST00000593891 A0A087WZG4 1122 aa16.58■□□□□ 0.24
ZNF558-202ENST00000593891 FYB1O15117 783 aa16.58■□□□□ 0.24
ZNF558-202ENST00000593891 INTS3Q68E01 1043 aaKnown RBP16.58■□□□□ 0.24
ZNF558-202ENST00000593891 TRIOBPQ9H2D6 2365 aa16.58■□□□□ 0.24
ZNF558-202ENST00000593891 NPR1P16066 1061 aa16.57■□□□□ 0.24
ZNF558-202ENST00000593891 ZC3H15Q8WU90 426 aaKnown RBP16.57■□□□□ 0.24
ZNF558-202ENST00000593891 ZNF296Q8WUU4 475 aaPredicted RBP16.57■□□□□ 0.24
ZNF558-202ENST00000593891 PGAP2Q9UHJ9 254 aa16.57■□□□□ 0.24
ZNF558-202ENST00000593891 ZBTB1Q9Y2K1 713 aa16.57■□□□□ 0.24
ZNF558-202ENST00000593891 SZT2Q5T011 3432 aa16.56■□□□□ 0.24
ZNF558-202ENST00000593891 WASHC2AQ641Q2 1341 aa16.56■□□□□ 0.24
ZNF558-202ENST00000593891 ST20-MTHFSA0A0A6YYL1 179 aa16.56■□□□□ 0.24
ZNF558-202ENST00000593891 POTEFA5A3E0 1075 aa16.56■□□□□ 0.24
ZNF558-202ENST00000593891 PPM1GO15355 546 aaPredicted RBP16.56■□□□□ 0.24
ZNF558-202ENST00000593891 MTHFSP49914 203 aa16.56■□□□□ 0.24
ZNF558-202ENST00000593891 OLFM4Q6UX06 510 aa16.56■□□□□ 0.24
ZNF558-202ENST00000593891 GPRC5DQ9NZD1 345 aa16.56■□□□□ 0.24
ZNF558-202ENST00000593891 PLEKHO1Q53GL0 409 aaPredicted RBP16.55■□□□□ 0.24
ZNF558-202ENST00000593891 C2orf69Q8N8R5 385 aa16.55■□□□□ 0.24
ZNF558-202ENST00000593891 SETDB2Q96T68 719 aa16.55■□□□□ 0.24
ZNF558-202ENST00000593891 PSMD1Q99460 953 aa16.55■□□□□ 0.24
ZNF558-202ENST00000593891 COL11A2P13942 1736 aaPredicted RBP16.54■□□□□ 0.24
ZNF558-202ENST00000593891 CANXP27824 592 aaKnown RBP16.54■□□□□ 0.24
ZNF558-202ENST00000593891 OTUD5Q96G74 571 aa16.54■□□□□ 0.24
ZNF558-202ENST00000593891 EMILIN1Q9Y6C2 1016 aa16.54■□□□□ 0.24
ZNF558-202ENST00000593891 ANKRD31Q8N7Z5 1873 aa16.54■□□□□ 0.24
ZNF558-202ENST00000593891 GBA2Q9HCG7 927 aaPredicted RBP16.53■□□□□ 0.24
ZNF558-202ENST00000593891 ZNF530Q6P9A1 599 aaPredicted RBP16.52■□□□□ 0.24
ZNF558-202ENST00000593891 USP48Q86UV5 1035 aa16.52■□□□□ 0.24
ZNF558-202ENST00000593891 LARGE2Q8N3Y3 721 aa16.52■□□□□ 0.24
ZNF558-202ENST00000593891 TJP1Q07157 1748 aa16.51■□□□□ 0.23
ZNF558-202ENST00000593891 SLC10A3P09131 477 aa16.51■□□□□ 0.23
ZNF558-202ENST00000593891 CHRDL2Q6WN34 429 aa16.51■□□□□ 0.23
ZNF558-202ENST00000593891 H0YGN5 161 aa16.5■□□□□ 0.23
ZNF558-202ENST00000593891 TBC1D8O95759 1140 aa16.5■□□□□ 0.23
ZNF558-202ENST00000593891 ALDH1B1P30837 517 aa16.5■□□□□ 0.23
ZNF558-202ENST00000593891 AMOTQ4VCS5 1084 aa16.5■□□□□ 0.23
ZNF558-202ENST00000593891 C1orf141Q5JVX7 400 aa16.5■□□□□ 0.23
ZNF558-202ENST00000593891 EIF5P55010 431 aaKnown RBP16.49■□□□□ 0.23
ZNF558-202ENST00000593891 NIM1KQ8IY84 436 aa16.49■□□□□ 0.23
ZNF558-202ENST00000593891 COL25A1Q9BXS0 654 aaPredicted RBP16.49■□□□□ 0.23
ZNF558-202ENST00000593891 GPR25O00155 361 aa16.48■□□□□ 0.23
ZNF558-202ENST00000593891 EN2P19622 333 aaPredicted RBP16.48■□□□□ 0.23
ZNF558-202ENST00000593891 NOM1Q5C9Z4 860 aaKnown RBP16.48■□□□□ 0.23
ZNF558-202ENST00000593891 CC2D2BQ6DHV5 1058 aa16.48■□□□□ 0.23
ZNF558-202ENST00000593891 RBM27Q9P2N5 1060 aaKnown RBP16.47■□□□□ 0.23
ZNF558-202ENST00000593891 TBC1D2BQ9UPU7 963 aa16.47■□□□□ 0.23
ZNF558-202ENST00000593891 MKI67P46013 3256 aaKnown RBP16.47■□□□□ 0.23
ZNF558-202ENST00000593891 GRIPAP1Q4V328 841 aa16.46■□□□□ 0.23
ZNF558-202ENST00000593891 L3MBTL2Q969R5 705 aa16.46■□□□□ 0.23
ZNF558-202ENST00000593891 ARFGEF2Q9Y6D5 1785 aa16.46■□□□□ 0.22
ZNF558-202ENST00000593891 KLRG2A4D1S0 409 aaPredicted RBP16.45■□□□□ 0.22
ZNF558-202ENST00000593891 FKTNO75072 461 aa16.45■□□□□ 0.22
ZNF558-202ENST00000593891 STARD3NLO95772 234 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms