RNA–Protein interactions for RNA: ENST00000593742.1

SOD3-202, Transcript of superoxide dismutase 3, humanhuman

TSL 5

Gene SOD3, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD3-202ENST00000593742 NBPF15Q8N660 670 aa15.77■□□□□ 0.12
SOD3-202ENST00000593742 TMPOP42166 694 aaKnown RBP15.76■□□□□ 0.11
SOD3-202ENST00000593742 EIF4A1P60842 406 aaKnown RBP15.76■□□□□ 0.11
SOD3-202ENST00000593742 C2CD5Q86YS7 1000 aa15.76■□□□□ 0.11
SOD3-202ENST00000593742 SETDB2Q96T68 719 aa15.76■□□□□ 0.11
SOD3-202ENST00000593742 GPBP1L1Q9HC44 474 aaPredicted RBP15.76■□□□□ 0.11
SOD3-202ENST00000593742 LAMB4A4D0S4 1761 aa15.76■□□□□ 0.11
SOD3-202ENST00000593742 BCORQ6W2J9 1755 aa15.76■□□□□ 0.11
SOD3-202ENST00000593742 NRXN2Q9P2S2 1712 aa15.76■□□□□ 0.11
SOD3-202ENST00000593742 FAM177BA6PVY3 158 aa15.75■□□□□ 0.11
SOD3-202ENST00000593742 LMOD3Q0VAK6 560 aa15.75■□□□□ 0.11
SOD3-202ENST00000593742 PRR5LQ6MZQ0 368 aa15.75■□□□□ 0.11
SOD3-202ENST00000593742 ADAMTS8Q9UP79 889 aa15.75■□□□□ 0.11
SOD3-202ENST00000593742 ADCY9O60503 1353 aa15.75■□□□□ 0.11
SOD3-202ENST00000593742 ARFGEF1Q9Y6D6 1849 aa15.74■□□□□ 0.11
SOD3-202ENST00000593742 H0YIN7 160 aa15.74■□□□□ 0.11
SOD3-202ENST00000593742 MYL6BP14649 208 aa15.74■□□□□ 0.11
SOD3-202ENST00000593742 CNBD1Q8NA66 436 aa15.74■□□□□ 0.11
SOD3-202ENST00000593742 RUNDC1Q96C34 613 aa15.74■□□□□ 0.11
SOD3-202ENST00000593742 ZNF652Q9Y2D9 606 aa15.74■□□□□ 0.11
SOD3-202ENST00000593742 LAS1LQ9Y4W2 734 aaKnown RBP15.74■□□□□ 0.11
SOD3-202ENST00000593742 ST5P78524 1137 aa15.73■□□□□ 0.11
SOD3-202ENST00000593742 ZNF622Q969S3 477 aaKnown RBP eCLIP15.73■□□□□ 0.11
SOD3-202ENST00000593742 EIF2S2P20042 333 aaKnown RBP15.72■□□□□ 0.11
SOD3-202ENST00000593742 C1QTNF8P60827 252 aa15.72■□□□□ 0.11
SOD3-202ENST00000593742 NBPF5PQ86XG9 351 aaPredicted RBP15.72■□□□□ 0.11
SOD3-202ENST00000593742 NIP7Q9Y221 180 aaKnown RBP eCLIP15.72■□□□□ 0.11
SOD3-202ENST00000593742 ANKRD31Q8N7Z5 1873 aa15.71■□□□□ 0.11
SOD3-202ENST00000593742 PDE6BP35913 854 aa15.71■□□□□ 0.11
SOD3-202ENST00000593742 RASSF7Q02833 373 aa15.71■□□□□ 0.11
SOD3-202ENST00000593742 C9orf131Q5VYM1 1079 aa15.71■□□□□ 0.11
SOD3-202ENST00000593742 KIF6Q6ZMV9 814 aa15.71■□□□□ 0.11
SOD3-202ENST00000593742 TTLL6Q8N841 843 aa15.71■□□□□ 0.11
SOD3-202ENST00000593742 NECTIN2Q92692 538 aa15.71■□□□□ 0.11
SOD3-202ENST00000593742 DLEC1Q9Y238 1755 aa15.7■□□□□ 0.1
SOD3-202ENST00000593742 HLFQ16534 295 aa15.7■□□□□ 0.1
SOD3-202ENST00000593742 BRIP1Q9BX63 1249 aa15.7■□□□□ 0.1
SOD3-202ENST00000593742 RNF181Q9P0P0 153 aa15.7■□□□□ 0.1
SOD3-202ENST00000593742 COL11A2P13942 1736 aaPredicted RBP15.69■□□□□ 0.1
SOD3-202ENST00000593742 SENP3-EIF4A1A0A087X0R7 540 aa15.69■□□□□ 0.1
SOD3-202ENST00000593742 POLA2Q14181 598 aa15.69■□□□□ 0.1
SOD3-202ENST00000593742 CLEC4GQ6UXB4 293 aa15.69■□□□□ 0.1
SOD3-202ENST00000593742 TTLL7Q6ZT98 887 aa15.69■□□□□ 0.1
SOD3-202ENST00000593742 ZBTB3Q9H5J0 574 aa15.69■□□□□ 0.1
SOD3-202ENST00000593742 ANXA1P04083 346 aa15.68■□□□□ 0.1
SOD3-202ENST00000593742 GTF2E1P29083 439 aaPredicted RBP15.68■□□□□ 0.1
SOD3-202ENST00000593742 TRIM35Q9UPQ4 493 aa15.68■□□□□ 0.1
SOD3-202ENST00000593742 GPTP24298 496 aa15.67■□□□□ 0.1
SOD3-202ENST00000593742 KRT24Q2M2I5 525 aa15.67■□□□□ 0.1
SOD3-202ENST00000593742 CACNA1SQ13698 1873 aa15.67■□□□□ 0.1
SOD3-202ENST00000593742 MAP3K15Q6ZN16 1313 aa15.67■□□□□ 0.1
SOD3-202ENST00000593742 ZNF316A6NFI3 1004 aaPredicted RBP15.66■□□□□ 0.1
SOD3-202ENST00000593742 APAF1O14727 1248 aa15.66■□□□□ 0.1
SOD3-202ENST00000593742 C21orf2O43822 256 aa15.66■□□□□ 0.1
SOD3-202ENST00000593742 TPTE2Q6XPS3 522 aa15.66■□□□□ 0.1
SOD3-202ENST00000593742 PROSER3Q2NL68 480 aa15.65■□□□□ 0.1
SOD3-202ENST00000593742 CCDC184Q52MB2 194 aa15.65■□□□□ 0.1
SOD3-202ENST00000593742 BABAM1Q9NWV8 329 aa15.65■□□□□ 0.1
SOD3-202ENST00000593742 PDZRN3Q9UPQ7 1066 aa15.65■□□□□ 0.1
SOD3-202ENST00000593742 NUP98P52948 1817 aa15.64■□□□□ 0.09
SOD3-202ENST00000593742 AIMP1Q12904 312 aaKnown RBP15.64■□□□□ 0.09
SOD3-202ENST00000593742 NUTM1Q86Y26 1132 aa15.64■□□□□ 0.09
SOD3-202ENST00000593742 MASTLQ96GX5 879 aa15.64■□□□□ 0.09
SOD3-202ENST00000593742 ERBB4Q15303 1308 aa15.64■□□□□ 0.09
SOD3-202ENST00000593742 SBF1O95248 1867 aa15.63■□□□□ 0.09
SOD3-202ENST00000593742 ERVV-1B6SEH8 477 aa15.63■□□□□ 0.09
SOD3-202ENST00000593742 CHL1O00533 1208 aa15.63■□□□□ 0.09
SOD3-202ENST00000593742 SRGNP10124 158 aa15.63■□□□□ 0.09
SOD3-202ENST00000593742 PRPF40BQ6NWY9 871 aaKnown RBP15.63■□□□□ 0.09
SOD3-202ENST00000593742 CNKSR1Q969H4 720 aa15.63■□□□□ 0.09
SOD3-202ENST00000593742 NMRK2Q9NPI5 230 aa15.63■□□□□ 0.09
SOD3-202ENST00000593742 NFKBIEO00221 500 aa15.62■□□□□ 0.09
SOD3-202ENST00000593742 KIF3CO14782 793 aa15.62■□□□□ 0.09
SOD3-202ENST00000593742 RGL2O15211 777 aa15.62■□□□□ 0.09
SOD3-202ENST00000593742 ANP32CO43423 234 aa15.62■□□□□ 0.09
SOD3-202ENST00000593742 LMNB1P20700 586 aa15.62■□□□□ 0.09
SOD3-202ENST00000593742 PDIA6Q15084 440 aa15.62■□□□□ 0.09
SOD3-202ENST00000593742 STYK1Q6J9G0 422 aa15.62■□□□□ 0.09
SOD3-202ENST00000593742 ABCC12Q96J65 1359 aa15.62■□□□□ 0.09
SOD3-202ENST00000593742 SLX4Q8IY92 1834 aa15.61■□□□□ 0.09
SOD3-202ENST00000593742 PRELPP51888 382 aa15.61■□□□□ 0.09
SOD3-202ENST00000593742 ERFEQ4G0M1 354 aa15.61■□□□□ 0.09
SOD3-202ENST00000593742 HDGFL1Q5TGJ6 251 aa15.61■□□□□ 0.09
SOD3-202ENST00000593742 XAGE3Q8WTP9 111 aa15.61■□□□□ 0.09
SOD3-202ENST00000593742 NYXQ9GZU5 481 aa15.61■□□□□ 0.09
SOD3-202ENST00000593742 UBN2Q6ZU65 1347 aa15.61■□□□□ 0.09
SOD3-202ENST00000593742 CCDC88AQ3V6T2 1871 aa15.61■□□□□ 0.09
SOD3-202ENST00000593742 TNRC6CQ9HCJ0 1690 aaKnown RBP15.6■□□□□ 0.09
SOD3-202ENST00000593742 NPR1P16066 1061 aa15.6■□□□□ 0.09
SOD3-202ENST00000593742 SUSD4Q5VX71 490 aa15.6■□□□□ 0.09
SOD3-202ENST00000593742 COPS6Q7L5N1 327 aa15.6■□□□□ 0.09
SOD3-202ENST00000593742 ZNF428Q96B54 188 aa15.6■□□□□ 0.09
SOD3-202ENST00000593742 CFAP44Q96MT7 982 aa15.6■□□□□ 0.09
SOD3-202ENST00000593742 MRS2Q9HD23 443 aa15.6■□□□□ 0.09
SOD3-202ENST00000593742 MBIPQ9NS73 344 aa15.6■□□□□ 0.09
SOD3-202ENST00000593742 CHPF2Q9P2E5 772 aa15.6■□□□□ 0.09
SOD3-202ENST00000593742 KDM2BQ8NHM5 1336 aa15.6■□□□□ 0.09
SOD3-202ENST00000593742 GIGYF2Q6Y7W6 1299 aaKnown RBP15.59■□□□□ 0.09
SOD3-202ENST00000593742 LRP10Q7Z4F1 713 aa15.59■□□□□ 0.09
SOD3-202ENST00000593742 TAOK3Q9H2K8 898 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms