RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 ZNF219Q9P2Y4 722 aaPredicted RBP14.28□□□□□ -0.12
USE1-203ENST00000593597 SRGNP10124 158 aa14.27□□□□□ -0.13
USE1-203ENST00000593597 CNBD1Q8NA66 436 aa14.27□□□□□ -0.13
USE1-203ENST00000593597 ZNF622Q969S3 477 aaKnown RBP eCLIP14.27□□□□□ -0.13
USE1-203ENST00000593597 PDE6BP35913 854 aa14.26□□□□□ -0.13
USE1-203ENST00000593597 C16orf71Q8IYS4 520 aaPredicted RBP14.26□□□□□ -0.13
USE1-203ENST00000593597 MIS18AQ9NYP9 233 aa14.26□□□□□ -0.13
USE1-203ENST00000593597 NUDCQ9Y266 331 aa14.26□□□□□ -0.13
USE1-203ENST00000593597 SNED1Q8TER0 1413 aa14.25□□□□□ -0.13
USE1-203ENST00000593597 LTBP3Q9NS15 1303 aa14.25□□□□□ -0.13
USE1-203ENST00000593597 SNRPA1P09661 255 aaKnown RBP14.25□□□□□ -0.13
USE1-203ENST00000593597 PRPF40BQ6NWY9 871 aaKnown RBP14.25□□□□□ -0.13
USE1-203ENST00000593597 C7orf43Q8WVR3 580 aa14.25□□□□□ -0.13
USE1-203ENST00000593597 PLEKHF1Q96S99 279 aa14.25□□□□□ -0.13
USE1-203ENST00000593597 SETDB2Q96T68 719 aa14.25□□□□□ -0.13
USE1-203ENST00000593597 HLFQ16534 295 aa14.24□□□□□ -0.13
USE1-203ENST00000593597 STYK1Q6J9G0 422 aa14.24□□□□□ -0.13
USE1-203ENST00000593597 JMYQ8N9B5 988 aa14.24□□□□□ -0.13
USE1-203ENST00000593597 KLRG1Q96E93 195 aa14.24□□□□□ -0.13
USE1-203ENST00000593597 ADAMTSL1Q8N6G6 1762 aa14.24□□□□□ -0.13
USE1-203ENST00000593597 COL4A5P29400 1685 aa14.23□□□□□ -0.13
USE1-203ENST00000593597 ABCC12Q96J65 1359 aa14.23□□□□□ -0.13
USE1-203ENST00000593597 SCN4AP35499 1836 aa14.23□□□□□ -0.13
USE1-203ENST00000593597 KLRG2A4D1S0 409 aaPredicted RBP14.23□□□□□ -0.13
USE1-203ENST00000593597 HTATSF1O43719 755 aaKnown RBP14.23□□□□□ -0.13
USE1-203ENST00000593597 OLFM4Q6UX06 510 aa14.23□□□□□ -0.13
USE1-203ENST00000593597 SMC1BQ8NDV3 1235 aa14.23□□□□□ -0.13
USE1-203ENST00000593597 RTF1Q92541 710 aaKnown RBP14.23□□□□□ -0.13
USE1-203ENST00000593597 THUMPD2Q9BTF0 503 aaKnown RBP14.23□□□□□ -0.13
USE1-203ENST00000593597 PDZRN3Q9UPQ7 1066 aa14.23□□□□□ -0.13
USE1-203ENST00000593597 LAMB2P55268 1798 aa14.22□□□□□ -0.13
USE1-203ENST00000593597 VEGFAP15692 232 aaPredicted RBP14.22□□□□□ -0.13
USE1-203ENST00000593597 ST5P78524 1137 aa14.22□□□□□ -0.13
USE1-203ENST00000593597 CLEC4GQ6UXB4 293 aa14.22□□□□□ -0.13
USE1-203ENST00000593597 SLC51AQ86UW1 340 aa14.22□□□□□ -0.13
USE1-203ENST00000593597 MASTLQ96GX5 879 aa14.22□□□□□ -0.13
USE1-203ENST00000593597 ANKRD36CQ5JPF3 1778 aa14.22□□□□□ -0.13
USE1-203ENST00000593597 POTEIP0CG38 1075 aa14.21□□□□□ -0.13
USE1-203ENST00000593597 POTEJP0CG39 1038 aa14.21□□□□□ -0.13
USE1-203ENST00000593597 TAF7Q15545 349 aaPredicted RBP14.21□□□□□ -0.13
USE1-203ENST00000593597 ERFEQ4G0M1 354 aa14.21□□□□□ -0.13
USE1-203ENST00000593597 CNKSR1Q969H4 720 aa14.21□□□□□ -0.13
USE1-203ENST00000593597 TAOK3Q9H2K8 898 aa14.21□□□□□ -0.13
USE1-203ENST00000593597 DDNO94850 711 aaPredicted RBP14.2□□□□□ -0.14
USE1-203ENST00000593597 NBPF5PQ86XG9 351 aaPredicted RBP14.2□□□□□ -0.14
USE1-203ENST00000593597 NIP7Q9Y221 180 aaKnown RBP eCLIP14.2□□□□□ -0.14
USE1-203ENST00000593597 LTBP1Q14766 1721 aa14.2□□□□□ -0.14
USE1-203ENST00000593597 FAM177BA6PVY3 158 aa14.19□□□□□ -0.14
USE1-203ENST00000593597 EIF4A1P60842 406 aaKnown RBP14.19□□□□□ -0.14
USE1-203ENST00000593597 UBN2Q6ZU65 1347 aa14.18□□□□□ -0.14
USE1-203ENST00000593597 RGL2O15211 777 aa14.18□□□□□ -0.14
USE1-203ENST00000593597 NFE2L2Q16236 605 aa14.18□□□□□ -0.14
USE1-203ENST00000593597 TTLL7Q6ZT98 887 aa14.18□□□□□ -0.14
USE1-203ENST00000593597 NPM2Q86SE8 214 aaKnown RBP14.18□□□□□ -0.14
USE1-203ENST00000593597 ZNF652Q9Y2D9 606 aa14.18□□□□□ -0.14
USE1-203ENST00000593597 ZNF541Q9H0D2 1346 aa14.17□□□□□ -0.14
USE1-203ENST00000593597 RIC1Q4ADV7 1423 aa14.17□□□□□ -0.14
USE1-203ENST00000593597 NPHP1O15259 732 aa14.17□□□□□ -0.14
USE1-203ENST00000593597 NPR1P16066 1061 aa14.17□□□□□ -0.14
USE1-203ENST00000593597 LRP10Q7Z4F1 713 aa14.17□□□□□ -0.14
USE1-203ENST00000593597 FKBP4Q02790 459 aaKnown RBP eCLIP14.16□□□□□ -0.14
USE1-203ENST00000593597 CCDC93Q567U6 631 aa14.16□□□□□ -0.14
USE1-203ENST00000593597 COL13A1Q5TAT6 717 aaPredicted RBP14.16□□□□□ -0.14
USE1-203ENST00000593597 NUTM1Q86Y26 1132 aa14.16□□□□□ -0.14
USE1-203ENST00000593597 NGEFQ8N5V2 710 aa14.16□□□□□ -0.14
USE1-203ENST00000593597 ZNF277Q9NRM2 450 aaPredicted RBP14.16□□□□□ -0.14
USE1-203ENST00000593597 TAF1P21675 1872 aa14.16□□□□□ -0.14
USE1-203ENST00000593597 MAP3K15Q6ZN16 1313 aa14.15□□□□□ -0.14
USE1-203ENST00000593597 CRY2Q49AN0 593 aa14.15□□□□□ -0.14
USE1-203ENST00000593597 TPTE2Q6XPS3 522 aa14.15□□□□□ -0.14
USE1-203ENST00000593597 IBTKQ9P2D0 1353 aaPredicted RBP14.14□□□□□ -0.15
USE1-203ENST00000593597 MYL6BP14649 208 aa14.14□□□□□ -0.15
USE1-203ENST00000593597 PDIA6Q15084 440 aa14.14□□□□□ -0.15
USE1-203ENST00000593597 SOGA3Q5TF21 947 aa14.14□□□□□ -0.15
USE1-203ENST00000593597 DPY19L2Q6NUT2 758 aa14.14□□□□□ -0.15
USE1-203ENST00000593597 C3orf67Q6ZVT6 689 aa14.14□□□□□ -0.15
USE1-203ENST00000593597 L3MBTL3Q96JM7 780 aaPredicted RBP14.14□□□□□ -0.15
USE1-203ENST00000593597 RRP7AQ9Y3A4 280 aaKnown RBP14.14□□□□□ -0.15
USE1-203ENST00000593597 DDX60Q8IY21 1712 aaKnown RBP14.13□□□□□ -0.15
USE1-203ENST00000593597 ERVV-1B6SEH8 477 aa14.13□□□□□ -0.15
USE1-203ENST00000593597 GPTP24298 496 aa14.13□□□□□ -0.15
USE1-203ENST00000593597 PROSER3Q2NL68 480 aa14.13□□□□□ -0.15
USE1-203ENST00000593597 SUSD4Q5VX71 490 aa14.13□□□□□ -0.15
USE1-203ENST00000593597 CHADLQ6NUI6 762 aa14.13□□□□□ -0.15
USE1-203ENST00000593597 PNISRQ8TF01 805 aaKnown RBP14.13□□□□□ -0.15
USE1-203ENST00000593597 ZBTB3Q9H5J0 574 aa14.13□□□□□ -0.15
USE1-203ENST00000593597 COL4A1P02462 1669 aa14.13□□□□□ -0.15
USE1-203ENST00000593597 NTSR2O95665 410 aa14.12□□□□□ -0.15
USE1-203ENST00000593597 ZNF34Q8IZ26 560 aa14.12□□□□□ -0.15
USE1-203ENST00000593597 TAF1DQ9H5J8 278 aaPredicted RBP14.12□□□□□ -0.15
USE1-203ENST00000593597 PASKQ96RG2 1323 aa14.12□□□□□ -0.15
USE1-203ENST00000593597 ANXA1P04083 346 aa14.11□□□□□ -0.15
USE1-203ENST00000593597 SYNE4Q8N205 404 aa14.11□□□□□ -0.15
USE1-203ENST00000593597 FZD9O00144 591 aa14.1□□□□□ -0.15
USE1-203ENST00000593597 HSPA1AP0DMV8 641 aaKnown RBP14.1□□□□□ -0.15
USE1-203ENST00000593597 HSPA1BP0DMV9 641 aaKnown RBP14.1□□□□□ -0.15
USE1-203ENST00000593597 HOXA10P31260 410 aaPredicted RBP14.1□□□□□ -0.15
USE1-203ENST00000593597 IARSP41252 1262 aaKnown RBP14.1□□□□□ -0.15
USE1-203ENST00000593597 MAPK8IP3Q9UPT6 1336 aa14.1□□□□□ -0.15
USE1-203ENST00000593597 LRRC37AA6NMS7 1700 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms