RNA–Protein interactions for RNA: ENST00000593594.1

PDE4C-205, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best)

Gene PDE4C, Length 481 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-205ENST00000593594 PCNTO95613 3336 aa24.96■■□□□ 1.59
PDE4C-205ENST00000593594 DICER1Q9UPY3 1922 aaKnown RBP24.96■■□□□ 1.59
PDE4C-205ENST00000593594 SRGNP10124 158 aa24.95■■□□□ 1.58
PDE4C-205ENST00000593594 TAOK3Q9H2K8 898 aa24.95■■□□□ 1.58
PDE4C-205ENST00000593594 PIP4K2AP48426 406 aaPredicted RBP24.94■■□□□ 1.58
PDE4C-205ENST00000593594 PRPF40BQ6NWY9 871 aaKnown RBP24.94■■□□□ 1.58
PDE4C-205ENST00000593594 BCORQ6W2J9 1755 aa24.94■■□□□ 1.58
PDE4C-205ENST00000593594 SLX4Q8IY92 1834 aa24.93■■□□□ 1.58
PDE4C-205ENST00000593594 PRAMEF22A3QJZ6 481 aa24.93■■□□□ 1.58
PDE4C-205ENST00000593594 MASTLQ96GX5 879 aa24.93■■□□□ 1.58
PDE4C-205ENST00000593594 CLEC4GQ6UXB4 293 aa24.92■■□□□ 1.58
PDE4C-205ENST00000593594 NUDCQ9Y266 331 aa24.92■■□□□ 1.58
PDE4C-205ENST00000593594 SNRPA1P09661 255 aaKnown RBP24.91■■□□□ 1.58
PDE4C-205ENST00000593594 SOGA3Q5TF21 947 aa24.91■■□□□ 1.58
PDE4C-205ENST00000593594 MCM10Q7L590 875 aa24.91■■□□□ 1.58
PDE4C-205ENST00000593594 RTF1Q92541 710 aaKnown RBP24.91■■□□□ 1.58
PDE4C-205ENST00000593594 NBPF5PQ86XG9 351 aaPredicted RBP24.9■■□□□ 1.58
PDE4C-205ENST00000593594 CACNA1SQ13698 1873 aa24.89■■□□□ 1.58
PDE4C-205ENST00000593594 DDNO94850 711 aaPredicted RBP24.89■■□□□ 1.58
PDE4C-205ENST00000593594 U2AF1L5P0DN76 240 aaPredicted RBP24.89■■□□□ 1.58
PDE4C-205ENST00000593594 U2AF1Q01081 240 aaKnown RBP eCLIP24.89■■□□□ 1.58
PDE4C-205ENST00000593594 ZNF652Q9Y2D9 606 aa24.89■■□□□ 1.58
PDE4C-205ENST00000593594 ARFGEF2Q9Y6D5 1785 aa24.88■■□□□ 1.57
PDE4C-205ENST00000593594 CHADLQ6NUI6 762 aa24.87■■□□□ 1.57
PDE4C-205ENST00000593594 C7orf43Q8WVR3 580 aa24.87■■□□□ 1.57
PDE4C-205ENST00000593594 HSPA1AP0DMV8 641 aaKnown RBP24.86■■□□□ 1.57
PDE4C-205ENST00000593594 HSPA1BP0DMV9 641 aaKnown RBP24.86■■□□□ 1.57
PDE4C-205ENST00000593594 NBPF26B4DH59 902 aa24.85■■□□□ 1.57
PDE4C-205ENST00000593594 POTEIP0CG38 1075 aa24.85■■□□□ 1.57
PDE4C-205ENST00000593594 POTEJP0CG39 1038 aa24.85■■□□□ 1.57
PDE4C-205ENST00000593594 NPR1P16066 1061 aa24.85■■□□□ 1.57
PDE4C-205ENST00000593594 PPP2R1AP30153 589 aa24.85■■□□□ 1.57
PDE4C-205ENST00000593594 DCTN1Q14203 1278 aa24.85■■□□□ 1.57
PDE4C-205ENST00000593594 NBPF10Q6P3W6 841 aaKnown RBP24.85■■□□□ 1.57
PDE4C-205ENST00000593594 TNS4Q8IZW8 715 aa24.85■■□□□ 1.57
PDE4C-205ENST00000593594 NBPF15Q8N660 670 aa24.85■■□□□ 1.57
PDE4C-205ENST00000593594 KLRG2A4D1S0 409 aaPredicted RBP24.84■■□□□ 1.57
PDE4C-205ENST00000593594 CCDC93Q567U6 631 aa24.84■■□□□ 1.57
PDE4C-205ENST00000593594 TPTE2Q6XPS3 522 aa24.84■■□□□ 1.57
PDE4C-205ENST00000593594 NIP7Q9Y221 180 aaKnown RBP eCLIP24.84■■□□□ 1.57
PDE4C-205ENST00000593594 RGL2O15211 777 aa24.83■■□□□ 1.57
PDE4C-205ENST00000593594 HTATSF1O43719 755 aaKnown RBP24.83■■□□□ 1.57
PDE4C-205ENST00000593594 CREBZFQ9NS37 354 aa24.83■■□□□ 1.57
PDE4C-205ENST00000593594 IQCA1LA6NCM1 817 aa24.81■■□□□ 1.56
PDE4C-205ENST00000593594 CAPN15O75808 1086 aa24.81■■□□□ 1.56
PDE4C-205ENST00000593594 L3MBTL3Q96JM7 780 aaPredicted RBP24.81■■□□□ 1.56
PDE4C-205ENST00000593594 FAM177BA6PVY3 158 aa24.8■■□□□ 1.56
PDE4C-205ENST00000593594 FKBP4Q02790 459 aaKnown RBP eCLIP24.8■■□□□ 1.56
PDE4C-205ENST00000593594 TAF7Q15545 349 aaPredicted RBP24.8■■□□□ 1.56
PDE4C-205ENST00000593594 HLFQ16534 295 aa24.79■■□□□ 1.56
PDE4C-205ENST00000593594 OLFM4Q6UX06 510 aa24.79■■□□□ 1.56
PDE4C-205ENST00000593594 ZNF277Q9NRM2 450 aaPredicted RBP24.79■■□□□ 1.56
PDE4C-205ENST00000593594 LDHDQ86WU2 507 aa24.78■■□□□ 1.56
PDE4C-205ENST00000593594 TAF1DQ9H5J8 278 aaPredicted RBP24.78■■□□□ 1.56
PDE4C-205ENST00000593594 MIS18AQ9NYP9 233 aa24.78■■□□□ 1.56
PDE4C-205ENST00000593594 MKRN1Q9UHC7 482 aaKnown RBP24.78■■□□□ 1.56
PDE4C-205ENST00000593594 RTKN2Q8IZC4 609 aa24.77■■□□□ 1.56
PDE4C-205ENST00000593594 SCN4AP35499 1836 aa24.77■■□□□ 1.56
PDE4C-205ENST00000593594 PASKQ96RG2 1323 aa24.76■■□□□ 1.55
PDE4C-205ENST00000593594 ZNF541Q9H0D2 1346 aa24.76■■□□□ 1.55
PDE4C-205ENST00000593594 GTF2E1P29083 439 aaPredicted RBP24.75■■□□□ 1.55
PDE4C-205ENST00000593594 ALDH1B1P30837 517 aa24.75■■□□□ 1.55
PDE4C-205ENST00000593594 LAMB4A4D0S4 1761 aa24.72■■□□□ 1.55
PDE4C-205ENST00000593594 CNTNAP1P78357 1384 aa24.72■■□□□ 1.55
PDE4C-205ENST00000593594 EAPPQ56P03 285 aaPredicted RBP24.72■■□□□ 1.55
PDE4C-205ENST00000593594 SYNE4Q8N205 404 aa24.72■■□□□ 1.55
PDE4C-205ENST00000593594 NGEFQ8N5V2 710 aa24.72■■□□□ 1.55
PDE4C-205ENST00000593594 HACL1Q9UJ83 578 aa24.72■■□□□ 1.55
PDE4C-205ENST00000593594 ERVV-1B6SEH8 477 aa24.71■■□□□ 1.55
PDE4C-205ENST00000593594 FZD9O00144 591 aa24.71■■□□□ 1.55
PDE4C-205ENST00000593594 ITGBL1O95965 494 aaPredicted RBP24.71■■□□□ 1.55
PDE4C-205ENST00000593594 IARSP41252 1262 aaKnown RBP24.71■■□□□ 1.55
PDE4C-205ENST00000593594 CRY2Q49AN0 593 aa24.71■■□□□ 1.55
PDE4C-205ENST00000593594 PNISRQ8TF01 805 aaKnown RBP24.71■■□□□ 1.55
PDE4C-205ENST00000593594 NYXQ9GZU5 481 aa24.71■■□□□ 1.55
PDE4C-205ENST00000593594 ABCC12Q96J65 1359 aa24.7■■□□□ 1.55
PDE4C-205ENST00000593594 NUTM1Q86Y26 1132 aa24.7■■□□□ 1.54
PDE4C-205ENST00000593594 MAP3K15Q6ZN16 1313 aa24.69■■□□□ 1.54
PDE4C-205ENST00000593594 NEFMP07197 916 aa24.69■■□□□ 1.54
PDE4C-205ENST00000593594 EPHX2P34913 555 aa24.69■■□□□ 1.54
PDE4C-205ENST00000593594 RRP7AQ9Y3A4 280 aaKnown RBP24.69■■□□□ 1.54
PDE4C-205ENST00000593594 SNED1Q8TER0 1413 aa24.69■■□□□ 1.54
PDE4C-205ENST00000593594 KDM3BQ7LBC6 1761 aa24.68■■□□□ 1.54
PDE4C-205ENST00000593594 TMEM88BA6NKF7 163 aa24.68■■□□□ 1.54
PDE4C-205ENST00000593594 EIF4A1P60842 406 aaKnown RBP24.68■■□□□ 1.54
PDE4C-205ENST00000593594 TTLL7Q6ZT98 887 aa24.68■■□□□ 1.54
PDE4C-205ENST00000593594 PSMD1Q99460 953 aa24.68■■□□□ 1.54
PDE4C-205ENST00000593594 CLEC11AQ9Y240 323 aa24.68■■□□□ 1.54
PDE4C-205ENST00000593594 RNF123Q5XPI4 1314 aa24.67■■□□□ 1.54
PDE4C-205ENST00000593594 DLG5Q8TDM6 1919 aa24.67■■□□□ 1.54
PDE4C-205ENST00000593594 PNMA8AQ86V59 439 aaPredicted RBP24.67■■□□□ 1.54
PDE4C-205ENST00000593594 NUP98P52948 1817 aa24.67■■□□□ 1.54
PDE4C-205ENST00000593594 KIF6Q6ZMV9 814 aa24.66■■□□□ 1.54
PDE4C-205ENST00000593594 GPC2Q8N158 579 aa24.66■■□□□ 1.54
PDE4C-205ENST00000593594 JDP2Q8WYK2 163 aa24.66■■□□□ 1.54
PDE4C-205ENST00000593594 PLEKHF1Q96S99 279 aa24.66■■□□□ 1.54
PDE4C-205ENST00000593594 ADAMTSL1Q8N6G6 1762 aa24.66■■□□□ 1.54
PDE4C-205ENST00000593594 FOXN1O15353 648 aa24.65■■□□□ 1.54
PDE4C-205ENST00000593594 MYL6BP14649 208 aa24.65■■□□□ 1.54
PDE4C-205ENST00000593594 GPTP24298 496 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms