RNA–Protein interactions for RNA: ENST00000593111.1

PSME3-216, Transcript of proteasome activator subunit 3, humanhuman

TSL 4

Gene PSME3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-216ENST00000593111 SCN7AQ01118 1682 aa23.37■■□□□ 1.33
PSME3-216ENST00000593111 U2AF1L5P0DN76 240 aaPredicted RBP23.36■■□□□ 1.33
PSME3-216ENST00000593111 SRGNP10124 158 aa23.36■■□□□ 1.33
PSME3-216ENST00000593111 U2AF1Q01081 240 aaKnown RBP eCLIP23.36■■□□□ 1.33
PSME3-216ENST00000593111 PRAMEF22A3QJZ6 481 aa23.35■■□□□ 1.33
PSME3-216ENST00000593111 PRPF40BQ6NWY9 871 aaKnown RBP23.35■■□□□ 1.33
PSME3-216ENST00000593111 MCM10Q7L590 875 aa23.35■■□□□ 1.33
PSME3-216ENST00000593111 NBPF5PQ86XG9 351 aaPredicted RBP23.35■■□□□ 1.33
PSME3-216ENST00000593111 MASTLQ96GX5 879 aa23.35■■□□□ 1.33
PSME3-216ENST00000593111 PCNTO95613 3336 aa23.35■■□□□ 1.33
PSME3-216ENST00000593111 COL11A2P13942 1736 aaPredicted RBP23.34■■□□□ 1.33
PSME3-216ENST00000593111 SNRPA1P09661 255 aaKnown RBP23.34■■□□□ 1.33
PSME3-216ENST00000593111 SOGA3Q5TF21 947 aa23.34■■□□□ 1.33
PSME3-216ENST00000593111 LTBP3Q9NS15 1303 aa23.33■■□□□ 1.33
PSME3-216ENST00000593111 CLEC4GQ6UXB4 293 aa23.33■■□□□ 1.33
PSME3-216ENST00000593111 ZNF652Q9Y2D9 606 aa23.33■■□□□ 1.33
PSME3-216ENST00000593111 FER1L6Q2WGJ9 1857 aa23.32■■□□□ 1.32
PSME3-216ENST00000593111 SLX4Q8IY92 1834 aa23.32■■□□□ 1.32
PSME3-216ENST00000593111 DDNO94850 711 aaPredicted RBP23.32■■□□□ 1.32
PSME3-216ENST00000593111 DCTN1Q14203 1278 aa23.31■■□□□ 1.32
PSME3-216ENST00000593111 DICER1Q9UPY3 1922 aaKnown RBP23.31■■□□□ 1.32
PSME3-216ENST00000593111 CHADLQ6NUI6 762 aa23.3■■□□□ 1.32
PSME3-216ENST00000593111 TPTE2Q6XPS3 522 aa23.3■■□□□ 1.32
PSME3-216ENST00000593111 FAM177BA6PVY3 158 aa23.29■■□□□ 1.32
PSME3-216ENST00000593111 CAPN15O75808 1086 aa23.29■■□□□ 1.32
PSME3-216ENST00000593111 NPR1P16066 1061 aa23.29■■□□□ 1.32
PSME3-216ENST00000593111 PPP2R1AP30153 589 aa23.29■■□□□ 1.32
PSME3-216ENST00000593111 CACNA1SQ13698 1873 aa23.29■■□□□ 1.32
PSME3-216ENST00000593111 TNS4Q8IZW8 715 aa23.29■■□□□ 1.32
PSME3-216ENST00000593111 NIP7Q9Y221 180 aaKnown RBP eCLIP23.29■■□□□ 1.32
PSME3-216ENST00000593111 NBPF26B4DH59 902 aa23.28■■□□□ 1.32
PSME3-216ENST00000593111 HSPA1AP0DMV8 641 aaKnown RBP23.28■■□□□ 1.32
PSME3-216ENST00000593111 HSPA1BP0DMV9 641 aaKnown RBP23.28■■□□□ 1.32
PSME3-216ENST00000593111 NBPF10Q6P3W6 841 aaKnown RBP23.28■■□□□ 1.32
PSME3-216ENST00000593111 NBPF15Q8N660 670 aa23.28■■□□□ 1.32
PSME3-216ENST00000593111 CCDC93Q567U6 631 aa23.27■■□□□ 1.32
PSME3-216ENST00000593111 C7orf43Q8WVR3 580 aa23.27■■□□□ 1.32
PSME3-216ENST00000593111 BCORQ6W2J9 1755 aa23.27■■□□□ 1.32
PSME3-216ENST00000593111 HTATSF1O43719 755 aaKnown RBP23.26■■□□□ 1.31
PSME3-216ENST00000593111 POTEIP0CG38 1075 aa23.26■■□□□ 1.31
PSME3-216ENST00000593111 POTEJP0CG39 1038 aa23.26■■□□□ 1.31
PSME3-216ENST00000593111 GTF2E1P29083 439 aaPredicted RBP23.26■■□□□ 1.31
PSME3-216ENST00000593111 TAF7Q15545 349 aaPredicted RBP23.26■■□□□ 1.31
PSME3-216ENST00000593111 MIS18AQ9NYP9 233 aa23.26■■□□□ 1.31
PSME3-216ENST00000593111 IQCA1LA6NCM1 817 aa23.24■■□□□ 1.31
PSME3-216ENST00000593111 CREBZFQ9NS37 354 aa23.24■■□□□ 1.31
PSME3-216ENST00000593111 MKRN1Q9UHC7 482 aaKnown RBP23.24■■□□□ 1.31
PSME3-216ENST00000593111 KLRG2A4D1S0 409 aaPredicted RBP23.23■■□□□ 1.31
PSME3-216ENST00000593111 HLFQ16534 295 aa23.23■■□□□ 1.31
PSME3-216ENST00000593111 NGEFQ8N5V2 710 aa23.23■■□□□ 1.31
PSME3-216ENST00000593111 ZNF277Q9NRM2 450 aaPredicted RBP23.23■■□□□ 1.31
PSME3-216ENST00000593111 FKBP4Q02790 459 aaKnown RBP eCLIP23.22■■□□□ 1.31
PSME3-216ENST00000593111 OLFM4Q6UX06 510 aa23.22■■□□□ 1.31
PSME3-216ENST00000593111 RGL2O15211 777 aa23.21■■□□□ 1.31
PSME3-216ENST00000593111 NEFMP07197 916 aa23.21■■□□□ 1.31
PSME3-216ENST00000593111 ALDH1B1P30837 517 aa23.21■■□□□ 1.31
PSME3-216ENST00000593111 RTKN2Q8IZC4 609 aa23.21■■□□□ 1.31
PSME3-216ENST00000593111 ARFGEF2Q9Y6D5 1785 aa23.21■■□□□ 1.31
PSME3-216ENST00000593111 LDHDQ86WU2 507 aa23.2■■□□□ 1.3
PSME3-216ENST00000593111 TAF1DQ9H5J8 278 aaPredicted RBP23.2■■□□□ 1.3
PSME3-216ENST00000593111 EAPPQ56P03 285 aaPredicted RBP23.19■■□□□ 1.3
PSME3-216ENST00000593111 L3MBTL3Q96JM7 780 aaPredicted RBP23.19■■□□□ 1.3
PSME3-216ENST00000593111 CLEC11AQ9Y240 323 aa23.19■■□□□ 1.3
PSME3-216ENST00000593111 SYNE4Q8N205 404 aa23.18■■□□□ 1.3
PSME3-216ENST00000593111 RRP7AQ9Y3A4 280 aaKnown RBP23.18■■□□□ 1.3
PSME3-216ENST00000593111 ZNF541Q9H0D2 1346 aa23.17■■□□□ 1.3
PSME3-216ENST00000593111 NYXQ9GZU5 481 aa23.17■■□□□ 1.3
PSME3-216ENST00000593111 HACL1Q9UJ83 578 aa23.17■■□□□ 1.3
PSME3-216ENST00000593111 NUTM1Q86Y26 1132 aa23.16■■□□□ 1.3
PSME3-216ENST00000593111 PNISRQ8TF01 805 aaKnown RBP23.16■■□□□ 1.3
PSME3-216ENST00000593111 IARSP41252 1262 aaKnown RBP23.15■■□□□ 1.3
PSME3-216ENST00000593111 SCN4AP35499 1836 aa23.15■■□□□ 1.3
PSME3-216ENST00000593111 PASKQ96RG2 1323 aa23.14■■□□□ 1.3
PSME3-216ENST00000593111 ERVV-1B6SEH8 477 aa23.14■■□□□ 1.29
PSME3-216ENST00000593111 MYL6BP14649 208 aa23.14■■□□□ 1.29
PSME3-216ENST00000593111 EPHX2P34913 555 aa23.14■■□□□ 1.29
PSME3-216ENST00000593111 KIF6Q6ZMV9 814 aa23.14■■□□□ 1.29
PSME3-216ENST00000593111 JDP2Q8WYK2 163 aa23.13■■□□□ 1.29
PSME3-216ENST00000593111 RPGRQ92834 1020 aaKnown RBP23.13■■□□□ 1.29
PSME3-216ENST00000593111 MAP3K15Q6ZN16 1313 aa23.12■■□□□ 1.29
PSME3-216ENST00000593111 TMEM88BA6NKF7 163 aa23.12■■□□□ 1.29
PSME3-216ENST00000593111 FZD9O00144 591 aa23.12■■□□□ 1.29
PSME3-216ENST00000593111 ITGBL1O95965 494 aaPredicted RBP23.12■■□□□ 1.29
PSME3-216ENST00000593111 GPTP24298 496 aa23.12■■□□□ 1.29
PSME3-216ENST00000593111 TTLL7Q6ZT98 887 aa23.12■■□□□ 1.29
PSME3-216ENST00000593111 PNMA8AQ86V59 439 aaPredicted RBP23.12■■□□□ 1.29
PSME3-216ENST00000593111 CNTNAP1P78357 1384 aa23.12■■□□□ 1.29
PSME3-216ENST00000593111 EIF4A1P60842 406 aaKnown RBP23.11■■□□□ 1.29
PSME3-216ENST00000593111 CRY2Q49AN0 593 aa23.11■■□□□ 1.29
PSME3-216ENST00000593111 THUMPD2Q9BTF0 503 aaKnown RBP23.11■■□□□ 1.29
PSME3-216ENST00000593111 ZBTB3Q9H5J0 574 aa23.11■■□□□ 1.29
PSME3-216ENST00000593111 RNF123Q5XPI4 1314 aa23.1■■□□□ 1.29
PSME3-216ENST00000593111 NFE2L2Q16236 605 aa23.1■■□□□ 1.29
PSME3-216ENST00000593111 CC2D2BQ6DHV5 1058 aa23.1■■□□□ 1.29
PSME3-216ENST00000593111 GPC2Q8N158 579 aa23.1■■□□□ 1.29
PSME3-216ENST00000593111 PSMD1Q99460 953 aa23.1■■□□□ 1.29
PSME3-216ENST00000593111 GJA3Q9Y6H8 435 aa23.1■■□□□ 1.29
PSME3-216ENST00000593111 VEGFBP49765 207 aa23.09■■□□□ 1.29
PSME3-216ENST00000593111 CNTROBQ8N137 903 aa23.09■■□□□ 1.29
PSME3-216ENST00000593111 ABCC12Q96J65 1359 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms