RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-218ENST00000593053 PDZRN3Q9UPQ7 1066 aa17.2■□□□□ 0.34
PRKCSH-218ENST00000593053 NIP7Q9Y221 180 aaKnown RBP eCLIP17.2■□□□□ 0.34
PRKCSH-218ENST00000593053 RGL2O15211 777 aa17.19■□□□□ 0.34
PRKCSH-218ENST00000593053 MYL6BP14649 208 aa17.19■□□□□ 0.34
PRKCSH-218ENST00000593053 RASSF7Q02833 373 aa17.19■□□□□ 0.34
PRKCSH-218ENST00000593053 KDM3BQ7LBC6 1761 aa17.19■□□□□ 0.34
PRKCSH-218ENST00000593053 ARFGEF1Q9Y6D6 1849 aa17.19■□□□□ 0.34
PRKCSH-218ENST00000593053 BCORQ6W2J9 1755 aa17.18■□□□□ 0.34
PRKCSH-218ENST00000593053 FAM177BA6PVY3 158 aa17.18■□□□□ 0.34
PRKCSH-218ENST00000593053 KIF3CO14782 793 aa17.18■□□□□ 0.34
PRKCSH-218ENST00000593053 TTLL7Q6ZT98 887 aa17.17■□□□□ 0.34
PRKCSH-218ENST00000593053 BABAM1Q9NWV8 329 aa17.17■□□□□ 0.34
PRKCSH-218ENST00000593053 ZNF219Q9P2Y4 722 aaPredicted RBP17.17■□□□□ 0.34
PRKCSH-218ENST00000593053 LAMB4A4D0S4 1761 aa17.16■□□□□ 0.34
PRKCSH-218ENST00000593053 SRGNP10124 158 aa17.16■□□□□ 0.34
PRKCSH-218ENST00000593053 ZEB1P37275 1124 aaPredicted RBP17.16■□□□□ 0.34
PRKCSH-218ENST00000593053 TPTE2Q6XPS3 522 aa17.16■□□□□ 0.34
PRKCSH-218ENST00000593053 KIF6Q6ZMV9 814 aa17.16■□□□□ 0.34
PRKCSH-218ENST00000593053 NMRK2Q9NPI5 230 aa17.16■□□□□ 0.34
PRKCSH-218ENST00000593053 MAP3K15Q6ZN16 1313 aa17.16■□□□□ 0.34
PRKCSH-218ENST00000593053 ERVV-1B6SEH8 477 aa17.15■□□□□ 0.34
PRKCSH-218ENST00000593053 NFKBIEO00221 500 aa17.15■□□□□ 0.34
PRKCSH-218ENST00000593053 C21orf2O43822 256 aa17.15■□□□□ 0.34
PRKCSH-218ENST00000593053 EIF2S2P20042 333 aaKnown RBP17.15■□□□□ 0.34
PRKCSH-218ENST00000593053 LMNB1P20700 586 aa17.15■□□□□ 0.34
PRKCSH-218ENST00000593053 PRELPP51888 382 aa17.15■□□□□ 0.34
PRKCSH-218ENST00000593053 STYK1Q6J9G0 422 aa17.15■□□□□ 0.34
PRKCSH-218ENST00000593053 ZBTB3Q9H5J0 574 aa17.15■□□□□ 0.34
PRKCSH-218ENST00000593053 TRIM35Q9UPQ4 493 aa17.15■□□□□ 0.34
PRKCSH-218ENST00000593053 ERBB4Q15303 1308 aa17.15■□□□□ 0.34
PRKCSH-218ENST00000593053 ANKRD31Q8N7Z5 1873 aa17.14■□□□□ 0.33
PRKCSH-218ENST00000593053 CNKSR1Q969H4 720 aa17.14■□□□□ 0.33
PRKCSH-218ENST00000593053 MASTLQ96GX5 879 aa17.14■□□□□ 0.33
PRKCSH-218ENST00000593053 LAS1LQ9Y4W2 734 aaKnown RBP17.14■□□□□ 0.33
PRKCSH-218ENST00000593053 DLEC1Q9Y238 1755 aa17.14■□□□□ 0.33
PRKCSH-218ENST00000593053 GTF2E1P29083 439 aaPredicted RBP17.13■□□□□ 0.33
PRKCSH-218ENST00000593053 PRPF40BQ6NWY9 871 aaKnown RBP17.13■□□□□ 0.33
PRKCSH-218ENST00000593053 CHL1O00533 1208 aa17.12■□□□□ 0.33
PRKCSH-218ENST00000593053 GPTP24298 496 aa17.12■□□□□ 0.33
PRKCSH-218ENST00000593053 PDIA6Q15084 440 aa17.12■□□□□ 0.33
PRKCSH-218ENST00000593053 NECTIN2Q92692 538 aa17.12■□□□□ 0.33
PRKCSH-218ENST00000593053 KDM2BQ8NHM5 1336 aa17.12■□□□□ 0.33
PRKCSH-218ENST00000593053 COL11A2P13942 1736 aaPredicted RBP17.12■□□□□ 0.33
PRKCSH-218ENST00000593053 KLRG2A4D1S0 409 aaPredicted RBP17.11■□□□□ 0.33
PRKCSH-218ENST00000593053 ANXA1P04083 346 aa17.11■□□□□ 0.33
PRKCSH-218ENST00000593053 NPR1P16066 1061 aa17.11■□□□□ 0.33
PRKCSH-218ENST00000593053 KRT24Q2M2I5 525 aa17.11■□□□□ 0.33
PRKCSH-218ENST00000593053 PROSER3Q2NL68 480 aa17.11■□□□□ 0.33
PRKCSH-218ENST00000593053 LRP10Q7Z4F1 713 aa17.11■□□□□ 0.33
PRKCSH-218ENST00000593053 NUTM1Q86Y26 1132 aa17.1■□□□□ 0.33
PRKCSH-218ENST00000593053 NYXQ9GZU5 481 aa17.1■□□□□ 0.33
PRKCSH-218ENST00000593053 ZC3H4Q9UPT8 1303 aaKnown RBP17.1■□□□□ 0.33
PRKCSH-218ENST00000593053 APAF1O14727 1248 aa17.09■□□□□ 0.33
PRKCSH-218ENST00000593053 TOMM70O94826 608 aa17.09■□□□□ 0.33
PRKCSH-218ENST00000593053 GIGYF2Q6Y7W6 1299 aaKnown RBP17.09■□□□□ 0.33
PRKCSH-218ENST00000593053 UBN2Q6ZU65 1347 aa17.09■□□□□ 0.33
PRKCSH-218ENST00000593053 ABCC12Q96J65 1359 aa17.09■□□□□ 0.33
PRKCSH-218ENST00000593053 HSPA6P17066 643 aa17.08■□□□□ 0.32
PRKCSH-218ENST00000593053 ERFEQ4G0M1 354 aa17.08■□□□□ 0.32
PRKCSH-218ENST00000593053 SOGA3Q5TF21 947 aa17.08■□□□□ 0.32
PRKCSH-218ENST00000593053 SUSD4Q5VX71 490 aa17.08■□□□□ 0.32
PRKCSH-218ENST00000593053 ZNF34Q8IZ26 560 aa17.08■□□□□ 0.32
PRKCSH-218ENST00000593053 TAOK3Q9H2K8 898 aa17.08■□□□□ 0.32
PRKCSH-218ENST00000593053 RRAGCQ9HB90 399 aa17.08■□□□□ 0.32
PRKCSH-218ENST00000593053 LTBP3Q9NS15 1303 aa17.07■□□□□ 0.32
PRKCSH-218ENST00000593053 AIMP1Q12904 312 aaKnown RBP17.07■□□□□ 0.32
PRKCSH-218ENST00000593053 COPS6Q7L5N1 327 aa17.07■□□□□ 0.32
PRKCSH-218ENST00000593053 C16orf71Q8IYS4 520 aaPredicted RBP17.07■□□□□ 0.32
PRKCSH-218ENST00000593053 XAGE3Q8WTP9 111 aa17.07■□□□□ 0.32
PRKCSH-218ENST00000593053 C7orf43Q8WVR3 580 aa17.07■□□□□ 0.32
PRKCSH-218ENST00000593053 CFAP44Q96MT7 982 aa17.07■□□□□ 0.32
PRKCSH-218ENST00000593053 IBTKQ9P2D0 1353 aaPredicted RBP17.06■□□□□ 0.32
PRKCSH-218ENST00000593053 GLTPD2A6NH11 291 aa17.06■□□□□ 0.32
PRKCSH-218ENST00000593053 CCDC184Q52MB2 194 aa17.06■□□□□ 0.32
PRKCSH-218ENST00000593053 CCDC93Q567U6 631 aa17.06■□□□□ 0.32
PRKCSH-218ENST00000593053 DDX21Q9NR30 783 aaKnown RBP eCLIP17.06■□□□□ 0.32
PRKCSH-218ENST00000593053 CEP350Q5VT06 3117 aa17.06■□□□□ 0.32
PRKCSH-218ENST00000593053 NTSR2O95665 410 aa17.05■□□□□ 0.32
PRKCSH-218ENST00000593053 CRY2Q49AN0 593 aa17.05■□□□□ 0.32
PRKCSH-218ENST00000593053 PARP10Q53GL7 1025 aa17.05■□□□□ 0.32
PRKCSH-218ENST00000593053 HDGFL1Q5TGJ6 251 aa17.05■□□□□ 0.32
PRKCSH-218ENST00000593053 OLFM4Q6UX06 510 aa17.05■□□□□ 0.32
PRKCSH-218ENST00000593053 MBIPQ9NS73 344 aa17.05■□□□□ 0.32
PRKCSH-218ENST00000593053 CHPF2Q9P2E5 772 aa17.05■□□□□ 0.32
PRKCSH-218ENST00000593053 SBF1O95248 1867 aa17.05■□□□□ 0.32
PRKCSH-218ENST00000593053 ZNF316A6NFI3 1004 aaPredicted RBP17.04■□□□□ 0.32
PRKCSH-218ENST00000593053 HOXB7P09629 217 aa17.04■□□□□ 0.32
PRKCSH-218ENST00000593053 ALDH1B1P30837 517 aa17.04■□□□□ 0.32
PRKCSH-218ENST00000593053 PPP1R42Q7Z4L9 355 aa17.04■□□□□ 0.32
PRKCSH-218ENST00000593053 RBM46Q8TBY0 533 aaKnown RBP17.04■□□□□ 0.32
PRKCSH-218ENST00000593053 SLX4Q8IY92 1834 aa17.04■□□□□ 0.32
PRKCSH-218ENST00000593053 DUSP27Q5VZP5 1158 aa17.03■□□□□ 0.32
PRKCSH-218ENST00000593053 RPGRQ92834 1020 aaKnown RBP17.03■□□□□ 0.32
PRKCSH-218ENST00000593053 UTP14AQ9BVJ6 771 aaKnown RBP17.03■□□□□ 0.32
PRKCSH-218ENST00000593053 RIC1Q4ADV7 1423 aa17.03■□□□□ 0.32
PRKCSH-218ENST00000593053 TNRC6CQ9HCJ0 1690 aaKnown RBP17.02■□□□□ 0.32
PRKCSH-218ENST00000593053 ZNF853P0CG23 659 aa17.02■□□□□ 0.32
PRKCSH-218ENST00000593053 CALD1Q05682 793 aaKnown RBP17.02■□□□□ 0.32
PRKCSH-218ENST00000593053 HSP90AB3PQ58FF7 597 aa17.02■□□□□ 0.32
PRKCSH-218ENST00000593053 DPY19L2Q6NUT2 758 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms