RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 BICDL1Q6ZP65 573 aa12.43□□□□□ -0.42
DDX39A-220ENST00000593008 G2E3Q7L622 706 aa12.43□□□□□ -0.42
DDX39A-220ENST00000593008 SSH1Q8WYL5 1049 aa12.43□□□□□ -0.42
DDX39A-220ENST00000593008 BCL2L12Q9HB09 334 aa12.43□□□□□ -0.42
DDX39A-220ENST00000593008 TNNQ9UQP3 1299 aa12.43□□□□□ -0.42
DDX39A-220ENST00000593008 A0A087WZG4 1122 aa12.42□□□□□ -0.42
DDX39A-220ENST00000593008 BCAR3O75815 825 aa12.42□□□□□ -0.42
DDX39A-220ENST00000593008 MYL6BP14649 208 aa12.42□□□□□ -0.42
DDX39A-220ENST00000593008 IL6STP40189 918 aaPredicted RBP12.42□□□□□ -0.42
DDX39A-220ENST00000593008 NFIXQ14938 502 aa12.42□□□□□ -0.42
DDX39A-220ENST00000593008 NPM2Q86SE8 214 aaKnown RBP12.42□□□□□ -0.42
DDX39A-220ENST00000593008 A0A0G2JLW4 131 aa12.41□□□□□ -0.42
DDX39A-220ENST00000593008 POLRMTO00411 1230 aaKnown RBP12.41□□□□□ -0.42
DDX39A-220ENST00000593008 YY1P25490 414 aa12.41□□□□□ -0.42
DDX39A-220ENST00000593008 TM4SF1P30408 202 aa12.41□□□□□ -0.42
DDX39A-220ENST00000593008 LRP10Q7Z4F1 713 aa12.41□□□□□ -0.42
DDX39A-220ENST00000593008 RARSP54136 660 aaKnown RBP12.4□□□□□ -0.42
DDX39A-220ENST00000593008 TBC1D9BQ66K14 1250 aa12.4□□□□□ -0.42
DDX39A-220ENST00000593008 DZIP3Q86Y13 1208 aaKnown RBP12.4□□□□□ -0.42
DDX39A-220ENST00000593008 MRPL50Q8N5N7 158 aaKnown RBP12.4□□□□□ -0.42
DDX39A-220ENST00000593008 PHAXQ9H814 394 aaKnown RBP12.4□□□□□ -0.42
DDX39A-220ENST00000593008 C10orf71Q711Q0 1435 aa12.39□□□□□ -0.43
DDX39A-220ENST00000593008 CAMTA2O94983 1202 aa12.39□□□□□ -0.43
DDX39A-220ENST00000593008 DPEP1P16444 411 aa12.39□□□□□ -0.43
DDX39A-220ENST00000593008 TTLL7Q6ZT98 887 aa12.39□□□□□ -0.43
DDX39A-220ENST00000593008 ZNF428Q96B54 188 aa12.39□□□□□ -0.43
DDX39A-220ENST00000593008 SMC4Q9NTJ3 1288 aa12.39□□□□□ -0.43
DDX39A-220ENST00000593008 PXDNLA1KZ92 1463 aa12.39□□□□□ -0.43
DDX39A-220ENST00000593008 SERPINB2P05120 415 aa12.38□□□□□ -0.43
DDX39A-220ENST00000593008 HOXB7P09629 217 aa12.38□□□□□ -0.43
DDX39A-220ENST00000593008 RCAN3Q9UKA8 241 aa12.38□□□□□ -0.43
DDX39A-220ENST00000593008 PLIN1O60240 522 aa12.37□□□□□ -0.43
DDX39A-220ENST00000593008 SLC4A2P04920 1241 aa12.37□□□□□ -0.43
DDX39A-220ENST00000593008 CHRNA5P30532 468 aa12.37□□□□□ -0.43
DDX39A-220ENST00000593008 TGFB2P61812 414 aa12.37□□□□□ -0.43
DDX39A-220ENST00000593008 AIMP1Q12904 312 aaKnown RBP12.37□□□□□ -0.43
DDX39A-220ENST00000593008 CCDC24Q8N4L8 307 aa12.37□□□□□ -0.43
DDX39A-220ENST00000593008 XAGE3Q8WTP9 111 aa12.37□□□□□ -0.43
DDX39A-220ENST00000593008 CCDC30Q5VVM6 783 aa12.36□□□□□ -0.43
DDX39A-220ENST00000593008 DDX21Q9NR30 783 aaKnown RBP eCLIP12.36□□□□□ -0.43
DDX39A-220ENST00000593008 BCS1LQ9Y276 419 aa12.36□□□□□ -0.43
DDX39A-220ENST00000593008 SCN7AQ01118 1682 aa12.35□□□□□ -0.43
DDX39A-220ENST00000593008 ADCY9O60503 1353 aa12.35□□□□□ -0.43
DDX39A-220ENST00000593008 F6X3S4 739 aa12.35□□□□□ -0.43
DDX39A-220ENST00000593008 GRIN3BO60391 1043 aa12.35□□□□□ -0.43
DDX39A-220ENST00000593008 KCNA3P22001 575 aa12.35□□□□□ -0.43
DDX39A-220ENST00000593008 HLFQ16534 295 aa12.35□□□□□ -0.43
DDX39A-220ENST00000593008 SETDB2Q96T68 719 aa12.35□□□□□ -0.43
DDX39A-220ENST00000593008 ZBTB3Q9H5J0 574 aa12.35□□□□□ -0.43
DDX39A-220ENST00000593008 NOB1Q9ULX3 412 aaKnown RBP12.35□□□□□ -0.43
DDX39A-220ENST00000593008 CARMIL3Q8ND23 1372 aa12.34□□□□□ -0.43
DDX39A-220ENST00000593008 BCORQ6W2J9 1755 aa12.34□□□□□ -0.43
DDX39A-220ENST00000593008 NPHP1O15259 732 aa12.34□□□□□ -0.43
DDX39A-220ENST00000593008 FLIIQ13045 1269 aa12.34□□□□□ -0.43
DDX39A-220ENST00000593008 C20orf194Q5TEA3 1177 aa12.34□□□□□ -0.43
DDX39A-220ENST00000593008 COPS6Q7L5N1 327 aa12.34□□□□□ -0.43
DDX39A-220ENST00000593008 FRAT1Q92837 279 aaPredicted RBP12.34□□□□□ -0.43
DDX39A-220ENST00000593008 STK31Q9BXU1 1019 aa12.34□□□□□ -0.43
DDX39A-220ENST00000593008 DBF4Q9UBU7 674 aaPredicted RBP12.34□□□□□ -0.43
DDX39A-220ENST00000593008 ARFGEF2Q9Y6D5 1785 aa12.33□□□□□ -0.44
DDX39A-220ENST00000593008 FAM177BA6PVY3 158 aa12.33□□□□□ -0.44
DDX39A-220ENST00000593008 CT47B1P0C2W7 299 aaPredicted RBP12.33□□□□□ -0.44
DDX39A-220ENST00000593008 ALDH1L2Q3SY69 923 aa12.33□□□□□ -0.44
DDX39A-220ENST00000593008 KIF6Q6ZMV9 814 aa12.33□□□□□ -0.44
DDX39A-220ENST00000593008 NIP7Q9Y221 180 aaKnown RBP eCLIP12.33□□□□□ -0.44
DDX39A-220ENST00000593008 ZNF652Q9Y2D9 606 aa12.33□□□□□ -0.44
DDX39A-220ENST00000593008 ERBB4Q15303 1308 aa12.33□□□□□ -0.44
DDX39A-220ENST00000593008 N4BP2Q86UW6 1770 aaPredicted RBP12.33□□□□□ -0.44
DDX39A-220ENST00000593008 RLBP1P12271 317 aa12.32□□□□□ -0.44
DDX39A-220ENST00000593008 IRX6P78412 446 aaPredicted RBP12.32□□□□□ -0.44
DDX39A-220ENST00000593008 PRR5LQ6MZQ0 368 aa12.32□□□□□ -0.44
DDX39A-220ENST00000593008 CLEC4GQ6UXB4 293 aa12.32□□□□□ -0.44
DDX39A-220ENST00000593008 NBPF5PQ86XG9 351 aaPredicted RBP12.32□□□□□ -0.44
DDX39A-220ENST00000593008 C2CD5Q86YS7 1000 aa12.32□□□□□ -0.44
DDX39A-220ENST00000593008 CNBD1Q8NA66 436 aa12.32□□□□□ -0.44
DDX39A-220ENST00000593008 PIM2Q9P1W9 311 aa12.32□□□□□ -0.44
DDX39A-220ENST00000593008 SUPT16HQ9Y5B9 1047 aaKnown RBP12.32□□□□□ -0.44
DDX39A-220ENST00000593008 KIF13BQ9NQT8 1826 aa12.32□□□□□ -0.44
DDX39A-220ENST00000593008 KIAA1551Q9HCM1 1747 aa12.31□□□□□ -0.44
DDX39A-220ENST00000593008 TRIM27P14373 513 aa12.31□□□□□ -0.44
DDX39A-220ENST00000593008 RRP1P56182 461 aaKnown RBP12.31□□□□□ -0.44
DDX39A-220ENST00000593008 FKBP5Q13451 457 aaPredicted RBP12.31□□□□□ -0.44
DDX39A-220ENST00000593008 DALRD3Q5D0E6 543 aaKnown RBP12.31□□□□□ -0.44
DDX39A-220ENST00000593008 ARHGAP27Q6ZUM4 889 aa12.31□□□□□ -0.44
DDX39A-220ENST00000593008 CLUAP1Q96AJ1 413 aa12.31□□□□□ -0.44
DDX39A-220ENST00000593008 HYPKQ9NX55 129 aa12.31□□□□□ -0.44
DDX39A-220ENST00000593008 MAP3K15Q6ZN16 1313 aa12.31□□□□□ -0.44
DDX39A-220ENST00000593008 PI4KAP2A4QPH2 592 aa12.3□□□□□ -0.44
DDX39A-220ENST00000593008 GPTP24298 496 aa12.3□□□□□ -0.44
DDX39A-220ENST00000593008 PI4KAP1Q8N8J0 262 aa12.3□□□□□ -0.44
DDX39A-220ENST00000593008 ZNF784Q8NCA9 323 aaPredicted RBP12.3□□□□□ -0.44
DDX39A-220ENST00000593008 PANK1Q8TE04 598 aa12.3□□□□□ -0.44
DDX39A-220ENST00000593008 CHMP4AQ9BY43 222 aa12.3□□□□□ -0.44
DDX39A-220ENST00000593008 MAP3K2Q9Y2U5 619 aa12.3□□□□□ -0.44
DDX39A-220ENST00000593008 AFDNP55196 1824 aaKnown RBP12.3□□□□□ -0.44
DDX39A-220ENST00000593008 ERVV-1B6SEH8 477 aa12.29□□□□□ -0.44
DDX39A-220ENST00000593008 H0YIN7 160 aa12.29□□□□□ -0.44
DDX39A-220ENST00000593008 ST5P78524 1137 aa12.29□□□□□ -0.44
DDX39A-220ENST00000593008 ZNF622Q969S3 477 aaKnown RBP eCLIP12.29□□□□□ -0.448e-18■□□□□ 10.2
DDX39A-220ENST00000593008 BRIP1Q9BX63 1249 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms